RNA–Protein interactions for RNA: ENST00000270066.10

SMG9-201, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG9, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-201ENST00000270066 STAB2Q8WWQ8 2551 aa7.41□□□□□ -1.22
SMG9-201ENST00000270066 DMXL2Q8TDJ6 3036 aa7.41□□□□□ -1.22
SMG9-201ENST00000270066 TNRC18O15417 2968 aaPredicted RBP7.4□□□□□ -1.23
SMG9-201ENST00000270066 REV3LO60673 3130 aa7.37□□□□□ -1.23
SMG9-201ENST00000270066 A8MUU9 505 aa7.37□□□□□ -1.23
SMG9-201ENST00000270066 NDUFAF8A1L188 74 aa7.36□□□□□ -1.23
SMG9-201ENST00000270066 FLNCQ14315 2725 aa7.34□□□□□ -1.23
SMG9-201ENST00000270066 HIVEP1P15822 2718 aa7.33□□□□□ -1.24
SMG9-201ENST00000270066 MYO15AQ9UKN7 3530 aa7.33□□□□□ -1.24
SMG9-201ENST00000270066 C20orf166-AS1Q96NR2 134 aa7.32□□□□□ -1.24
SMG9-201ENST00000270066 ADGRG4Q8IZF6 3080 aa7.32□□□□□ -1.24
SMG9-201ENST00000270066 BOD1L1Q8NFC6 3051 aa7.32□□□□□ -1.24
SMG9-201ENST00000270066 TACC2O95359 2948 aa7.31□□□□□ -1.24
SMG9-201ENST00000270066 FRYLO94915 3013 aa7.3□□□□□ -1.24
SMG9-201ENST00000270066 UTP20O75691 2785 aaKnown RBP7.3□□□□□ -1.24
SMG9-201ENST00000270066 LRBAP50851 2863 aa7.28□□□□□ -1.24
SMG9-201ENST00000270066 ATMQ13315 3056 aa7.27□□□□□ -1.25
SMG9-201ENST00000270066 APCP25054 2843 aa7.26□□□□□ -1.25
SMG9-201ENST00000270066 USP34Q70CQ2 3546 aa7.24□□□□□ -1.25
SMG9-201ENST00000270066 KRTAP1-4P0C5Y4 121 aa7.22□□□□□ -1.25
SMG9-201ENST00000270066 CFAP47Q6ZTR5 3102 aa7.21□□□□□ -1.25
SMG9-201ENST00000270066 COL12A1Q99715 3063 aa7.2□□□□□ -1.26
SMG9-201ENST00000270066 XP32Q5T750 250 aa7.16□□□□□ -1.26
SMG9-201ENST00000270066 DMXL1Q9Y485 3027 aa7.14□□□□□ -1.27
SMG9-201ENST00000270066 ZZEF1O43149 2961 aa7.13□□□□□ -1.27
SMG9-201ENST00000270066 TENM4Q6N022 2769 aa7.13□□□□□ -1.27
SMG9-201ENST00000270066 NIPBLQ6KC79 2804 aaeCLIP7.12□□□□□ -1.27
SMG9-201ENST00000270066 TPRXLQ17RH7 258 aa7.1□□□□□ -1.27
SMG9-201ENST00000270066 CELSR2Q9HCU4 2923 aa7.09□□□□□ -1.27
SMG9-201ENST00000270066 TNP1P09430 55 aa7.08□□□□□ -1.28
SMG9-201ENST00000270066 LOC400499M0QZD8 3231 aa7.07□□□□□ -1.28
SMG9-201ENST00000270066 C10orf95Q9H7T3 257 aa7.07□□□□□ -1.28
SMG9-201ENST00000270066 CRYBG3Q68DQ2 2970 aa7.02□□□□□ -1.29
SMG9-201ENST00000270066 H0YAA0 97 aa7□□□□□ -1.29
SMG9-201ENST00000270066 WDFY3Q8IZQ1 3526 aa6.96□□□□□ -1.3
SMG9-201ENST00000270066 ZANQ9Y493 2812 aa6.96□□□□□ -1.3
SMG9-201ENST00000270066 DCHS2Q6V1P9 2916 aa6.95□□□□□ -1.3
SMG9-201ENST00000270066 A0A1B0GVY2 172 aa6.95□□□□□ -1.3
SMG9-201ENST00000270066 KRTAP13-3Q3SY46 172 aa6.95□□□□□ -1.3
SMG9-201ENST00000270066 HRNRQ86YZ3 2850 aaPredicted RBP6.94□□□□□ -1.3
SMG9-201ENST00000270066 DMDP11532 3685 aa6.93□□□□□ -1.3
SMG9-201ENST00000270066 MUC3AQ02505 3323 aa6.9□□□□□ -1.3
SMG9-201ENST00000270066 KRTAP10-8P60410 259 aa6.89□□□□□ -1.31
SMG9-201ENST00000270066 PP632Q6XCG6 107 aa6.88□□□□□ -1.31
SMG9-201ENST00000270066 FBN2P35556 2912 aa6.87□□□□□ -1.31
SMG9-201ENST00000270066 ASPMQ8IZT6 3477 aa6.86□□□□□ -1.31
SMG9-201ENST00000270066 LAMA5O15230 3695 aa6.86□□□□□ -1.31
SMG9-201ENST00000270066 KRTAP10-10P60014 251 aa6.84□□□□□ -1.31
SMG9-201ENST00000270066 RELNP78509 3460 aa6.83□□□□□ -1.32
SMG9-201ENST00000270066 P0C880 135 aa6.82□□□□□ -1.32
SMG9-201ENST00000270066 ZFHX4Q86UP3 3567 aa6.79□□□□□ -1.32
SMG9-201ENST00000270066 DCHS1Q96JQ0 3298 aa6.79□□□□□ -1.32
SMG9-201ENST00000270066 PRO2289Q9P1D8 64 aa6.78□□□□□ -1.32
SMG9-201ENST00000270066 NF1P21359 2839 aa6.77□□□□□ -1.33
SMG9-201ENST00000270066 TENM2Q9NT68 2774 aa6.73□□□□□ -1.33
SMG9-201ENST00000270066 TGP01266 2768 aa6.72□□□□□ -1.33
SMG9-201ENST00000270066 TENM1Q9UKZ4 2725 aa6.72□□□□□ -1.33
SMG9-201ENST00000270066 MXRA5Q9NR99 2828 aa6.66□□□□□ -1.34
SMG9-201ENST00000270066 TENM3Q9P273 2699 aa6.64□□□□□ -1.35
SMG9-201ENST00000270066 CELSR1Q9NYQ6 3014 aa6.6□□□□□ -1.35
SMG9-201ENST00000270066 PDZD2O15018 2839 aa6.58□□□□□ -1.36
SMG9-201ENST00000270066 SMG1Q96Q15 3661 aaKnown RBP6.56□□□□□ -1.36
SMG9-201ENST00000270066 CSMD1Q96PZ7 3565 aa6.52□□□□□ -1.37
SMG9-201ENST00000270066 KRTAP12-2P59991 146 aa6.51□□□□□ -1.37
SMG9-201ENST00000270066 NBPF19A0A087WUL8 3843 aa6.5□□□□□ -1.37
SMG9-201ENST00000270066 SVEP1Q4LDE5 3571 aa6.42□□□□□ -1.38
SMG9-201ENST00000270066 PKD1L1Q8TDX9 2849 aa6.38□□□□□ -1.39
SMG9-201ENST00000270066 SPENQ96T58 3664 aaKnown RBP6.37□□□□□ -1.39
SMG9-201ENST00000270066 KRTAP13-4Q3LI77 160 aa6.36□□□□□ -1.39
SMG9-201ENST00000270066 ANK3Q12955 4377 aaKnown RBP6.36□□□□□ -1.39
SMG9-201ENST00000270066 KRTAP12-1P59990 96 aa6.36□□□□□ -1.39
SMG9-201ENST00000270066 KRTAP3-1Q9BYR8 98 aa6.36□□□□□ -1.39
SMG9-201ENST00000270066 OTOGQ6ZRI0 2925 aa6.35□□□□□ -1.39
SMG9-201ENST00000270066 VWFP04275 2813 aa6.33□□□□□ -1.4
SMG9-201ENST00000270066 CUBNO60494 3623 aa6.27□□□□□ -1.41
SMG9-201ENST00000270066 BSNQ9UPA5 3926 aa6.27□□□□□ -1.41
SMG9-201ENST00000270066 ZFHX3Q15911 3703 aa6.27□□□□□ -1.41
SMG9-201ENST00000270066 MT1HL1P0DM35 61 aa6.27□□□□□ -1.41
SMG9-201ENST00000270066 CSMD2Q7Z408 3487 aa6.25□□□□□ -1.41
SMG9-201ENST00000270066 KRTAP10-6P60371 365 aaPredicted RBP6.2□□□□□ -1.42
SMG9-201ENST00000270066 FBN1P35555 2871 aaKnown RBP6.19□□□□□ -1.42
SMG9-201ENST00000270066 KRTAP15-1Q3LI76 137 aa6.15□□□□□ -1.43
SMG9-201ENST00000270066 FBN3Q75N90 2809 aa6.13□□□□□ -1.43
SMG9-201ENST00000270066 SRRM2Q9UQ35 2752 aaKnown RBP6.12□□□□□ -1.43
SMG9-201ENST00000270066 KRTAP10-4P60372 401 aaPredicted RBP6.11□□□□□ -1.43
SMG9-201ENST00000270066 MEGF8Q7Z7M0 2845 aa6.07□□□□□ -1.44
SMG9-201ENST00000270066 ALMS1Q8TCU4 4167 aa6.05□□□□□ -1.44
SMG9-201ENST00000270066 KRTAP4-5Q9BYR2 181 aa6.04□□□□□ -1.44
SMG9-201ENST00000270066 TRRAPQ9Y4A5 3859 aa6.04□□□□□ -1.44
SMG9-201ENST00000270066 HUWE1Q7Z6Z7 4374 aaKnown RBP6.02□□□□□ -1.45
SMG9-201ENST00000270066 VPS13CQ709C8 3753 aa5.98□□□□□ -1.45
SMG9-201ENST00000270066 KRTAP3-2Q9BYR7 98 aa5.97□□□□□ -1.45
SMG9-201ENST00000270066 KRTAP3-3Q9BYR6 98 aa5.96□□□□□ -1.45
SMG9-201ENST00000270066 COL7A1Q02388 2944 aa5.93□□□□□ -1.46
SMG9-201ENST00000270066 KRTAP10-12P60413 245 aa5.9□□□□□ -1.47
SMG9-201ENST00000270066 ZNF469Q96JG9 3925 aaPredicted RBP5.81□□□□□ -1.48
SMG9-201ENST00000270066 INE1O15225 51 aa5.81□□□□□ -1.48
SMG9-201ENST00000270066 AKAP9Q99996 3911 aa5.79□□□□□ -1.48
SMG9-201ENST00000270066 KRTAP23-1A1A580 65 aa5.71□□□□□ -1.49
SMG9-201ENST00000270066 DNAH9Q9NYC9 4486 aa5.71□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms