RNA–Protein interactions for RNA: ENST00000265563.12

PRKAR2A-201, Transcript of protein kinase cAMP-dependent type II regulatory subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAR2A, Length 6,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAR2A-201ENST00000265563 COL12A1Q99715 3063 aa10□□□□□ -0.81
PRKAR2A-201ENST00000265563 UTP20O75691 2785 aaKnown RBP9.97□□□□□ -0.81
PRKAR2A-201ENST00000265563 KMT2BQ9UMN6 2715 aaPredicted RBP9.97□□□□□ -0.81
PRKAR2A-201ENST00000265563 FRYLO94915 3013 aa9.97□□□□□ -0.81
PRKAR2A-201ENST00000265563 BOD1L1Q8NFC6 3051 aa9.96□□□□□ -0.82
PRKAR2A-201ENST00000265563 CFAP47Q6ZTR5 3102 aa9.94□□□□□ -0.82
PRKAR2A-201ENST00000265563 APCP25054 2843 aa9.92□□□□□ -0.82
PRKAR2A-201ENST00000265563 KRTAP25-1Q3LHN0 102 aa9.91□□□□□ -0.82
PRKAR2A-201ENST00000265563 HIVEP1P15822 2718 aa9.89□□□□□ -0.83
PRKAR2A-201ENST00000265563 ASH1LQ9NR48 2969 aaKnown RBP9.88□□□□□ -0.83
PRKAR2A-201ENST00000265563 ADGRG4Q8IZF6 3080 aa9.88□□□□□ -0.83
PRKAR2A-201ENST00000265563 A0A1B0GVY2 172 aa9.84□□□□□ -0.83
PRKAR2A-201ENST00000265563 TNP1P09430 55 aa9.84□□□□□ -0.83
PRKAR2A-201ENST00000265563 FLNCQ14315 2725 aa9.83□□□□□ -0.84
PRKAR2A-201ENST00000265563 A6NN06 94 aa9.83□□□□□ -0.84
PRKAR2A-201ENST00000265563 XP32Q5T750 250 aa9.77□□□□□ -0.85
PRKAR2A-201ENST00000265563 SPEGQ15772 3267 aa9.76□□□□□ -0.85
PRKAR2A-201ENST00000265563 KRTAP1-4P0C5Y4 121 aa9.74□□□□□ -0.85
PRKAR2A-201ENST00000265563 EYSQ5T1H1 3165 aa9.74□□□□□ -0.85
PRKAR2A-201ENST00000265563 NBEAQ8NFP9 2946 aa9.74□□□□□ -0.85
PRKAR2A-201ENST00000265563 TENM4Q6N022 2769 aa9.73□□□□□ -0.85
PRKAR2A-201ENST00000265563 KRTAP10-8P60410 259 aa9.71□□□□□ -0.86
PRKAR2A-201ENST00000265563 USP34Q70CQ2 3546 aa9.71□□□□□ -0.86
PRKAR2A-201ENST00000265563 SPTBN5Q9NRC6 3674 aaKnown RBP9.7□□□□□ -0.86
PRKAR2A-201ENST00000265563 C10orf95Q9H7T3 257 aa9.7□□□□□ -0.86
PRKAR2A-201ENST00000265563 ZZEF1O43149 2961 aa9.68□□□□□ -0.86
PRKAR2A-201ENST00000265563 CELSR2Q9HCU4 2923 aa9.66□□□□□ -0.86
PRKAR2A-201ENST00000265563 KRTAP16-1A8MUX0 517 aa9.64□□□□□ -0.87
PRKAR2A-201ENST00000265563 NDUFAF8A1L188 74 aa9.63□□□□□ -0.87
PRKAR2A-201ENST00000265563 DCHS2Q6V1P9 2916 aa9.54□□□□□ -0.88
PRKAR2A-201ENST00000265563 KRTAP10-10P60014 251 aa9.54□□□□□ -0.88
PRKAR2A-201ENST00000265563 TNRC18O15417 2968 aaPredicted RBP9.53□□□□□ -0.88
PRKAR2A-201ENST00000265563 TPRXLQ17RH7 258 aa9.53□□□□□ -0.88
PRKAR2A-201ENST00000265563 NIPBLQ6KC79 2804 aaeCLIP9.5□□□□□ -0.89
PRKAR2A-201ENST00000265563 DMXL1Q9Y485 3027 aa9.49□□□□□ -0.89
PRKAR2A-201ENST00000265563 ZANQ9Y493 2812 aa9.4□□□□□ -0.91
PRKAR2A-201ENST00000265563 KRTAP13-3Q3SY46 172 aa9.39□□□□□ -0.91
PRKAR2A-201ENST00000265563 H0YAA0 97 aa9.39□□□□□ -0.91
PRKAR2A-201ENST00000265563 PP632Q6XCG6 107 aa9.37□□□□□ -0.91
PRKAR2A-201ENST00000265563 HRNRQ86YZ3 2850 aaPredicted RBP9.33□□□□□ -0.92
PRKAR2A-201ENST00000265563 LOC400499M0QZD8 3231 aa9.31□□□□□ -0.92
PRKAR2A-201ENST00000265563 TENM1Q9UKZ4 2725 aa9.31□□□□□ -0.92
PRKAR2A-201ENST00000265563 P0C880 135 aa9.29□□□□□ -0.92
PRKAR2A-201ENST00000265563 PRO2289Q9P1D8 64 aa9.29□□□□□ -0.92
PRKAR2A-201ENST00000265563 TENM2Q9NT68 2774 aa9.29□□□□□ -0.92
PRKAR2A-201ENST00000265563 NF1P21359 2839 aa9.28□□□□□ -0.92
PRKAR2A-201ENST00000265563 FBN2P35556 2912 aa9.27□□□□□ -0.93
PRKAR2A-201ENST00000265563 MYO15AQ9UKN7 3530 aa9.24□□□□□ -0.93
PRKAR2A-201ENST00000265563 CELSR1Q9NYQ6 3014 aa9.21□□□□□ -0.93
PRKAR2A-201ENST00000265563 WDFY3Q8IZQ1 3526 aa9.12□□□□□ -0.95
PRKAR2A-201ENST00000265563 TENM3Q9P273 2699 aa9.12□□□□□ -0.95
PRKAR2A-201ENST00000265563 ASPMQ8IZT6 3477 aa9.08□□□□□ -0.96
PRKAR2A-201ENST00000265563 RELNP78509 3460 aa9.07□□□□□ -0.96
PRKAR2A-201ENST00000265563 TGP01266 2768 aa9□□□□□ -0.97
PRKAR2A-201ENST00000265563 NBPF19A0A087WUL8 3843 aa9□□□□□ -0.97
PRKAR2A-201ENST00000265563 PKD1L1Q8TDX9 2849 aa8.98□□□□□ -0.97
PRKAR2A-201ENST00000265563 KRTAP12-2P59991 146 aa8.93□□□□□ -0.98
PRKAR2A-201ENST00000265563 DCHS1Q96JQ0 3298 aa8.91□□□□□ -0.98
PRKAR2A-201ENST00000265563 MXRA5Q9NR99 2828 aa8.9□□□□□ -0.99
PRKAR2A-201ENST00000265563 VWFP04275 2813 aa8.88□□□□□ -0.99
PRKAR2A-201ENST00000265563 ZFHX4Q86UP3 3567 aa8.83□□□□□ -1
PRKAR2A-201ENST00000265563 LAMA5O15230 3695 aa8.78□□□□□ -1
PRKAR2A-201ENST00000265563 CSMD1Q96PZ7 3565 aa8.72□□□□□ -1.01
PRKAR2A-201ENST00000265563 KRTAP13-4Q3LI77 160 aa8.72□□□□□ -1.01
PRKAR2A-201ENST00000265563 PDZD2O15018 2839 aa8.71□□□□□ -1.01
PRKAR2A-201ENST00000265563 KRTAP12-1P59990 96 aa8.7□□□□□ -1.02
PRKAR2A-201ENST00000265563 KRTAP3-1Q9BYR8 98 aa8.67□□□□□ -1.02
PRKAR2A-201ENST00000265563 ZFHX3Q15911 3703 aa8.61□□□□□ -1.03
PRKAR2A-201ENST00000265563 KRTAP15-1Q3LI76 137 aa8.52□□□□□ -1.05
PRKAR2A-201ENST00000265563 ANK3Q12955 4377 aaKnown RBP8.51□□□□□ -1.05
PRKAR2A-201ENST00000265563 DMDP11532 3685 aa8.5□□□□□ -1.05
PRKAR2A-201ENST00000265563 FBN1P35555 2871 aaKnown RBP8.5□□□□□ -1.05
PRKAR2A-201ENST00000265563 SMG1Q96Q15 3661 aaKnown RBP8.48□□□□□ -1.05
PRKAR2A-201ENST00000265563 OTOGQ6ZRI0 2925 aa8.44□□□□□ -1.06
PRKAR2A-201ENST00000265563 MT1HL1P0DM35 61 aa8.38□□□□□ -1.07
PRKAR2A-201ENST00000265563 KRTAP10-6P60371 365 aaPredicted RBP8.37□□□□□ -1.07
PRKAR2A-201ENST00000265563 CSMD2Q7Z408 3487 aa8.36□□□□□ -1.07
PRKAR2A-201ENST00000265563 SVEP1Q4LDE5 3571 aa8.35□□□□□ -1.07
PRKAR2A-201ENST00000265563 SRRM2Q9UQ35 2752 aaKnown RBP8.34□□□□□ -1.07
PRKAR2A-201ENST00000265563 FBN3Q75N90 2809 aa8.32□□□□□ -1.08
PRKAR2A-201ENST00000265563 KRTAP4-5Q9BYR2 181 aa8.3□□□□□ -1.08
PRKAR2A-201ENST00000265563 CRCT1Q9UGL9 99 aa8.26□□□□□ -1.09
PRKAR2A-201ENST00000265563 MEGF8Q7Z7M0 2845 aa8.25□□□□□ -1.09
PRKAR2A-201ENST00000265563 TRRAPQ9Y4A5 3859 aa8.23□□□□□ -1.09
PRKAR2A-201ENST00000265563 CUBNO60494 3623 aa8.22□□□□□ -1.09
PRKAR2A-201ENST00000265563 SPENQ96T58 3664 aaKnown RBP8.22□□□□□ -1.09
PRKAR2A-201ENST00000265563 MUC3AQ02505 3323 aa8.19□□□□□ -1.1
PRKAR2A-201ENST00000265563 COL7A1Q02388 2944 aa8.16□□□□□ -1.1
PRKAR2A-201ENST00000265563 KRTAP10-12P60413 245 aa8.14□□□□□ -1.11
PRKAR2A-201ENST00000265563 HUWE1Q7Z6Z7 4374 aaKnown RBP8.13□□□□□ -1.11
PRKAR2A-201ENST00000265563 KRTAP3-3Q9BYR6 98 aa8.1□□□□□ -1.11
PRKAR2A-201ENST00000265563 KRTAP3-2Q9BYR7 98 aa8.06□□□□□ -1.12
PRKAR2A-201ENST00000265563 KRTAP10-4P60372 401 aaPredicted RBP8.05□□□□□ -1.12
PRKAR2A-201ENST00000265563 BSNQ9UPA5 3926 aa7.95□□□□□ -1.14
PRKAR2A-201ENST00000265563 ALMS1Q8TCU4 4167 aa7.92□□□□□ -1.14
PRKAR2A-201ENST00000265563 KRTAP12-3P60328 96 aa7.86□□□□□ -1.15
PRKAR2A-201ENST00000265563 VPS13CQ709C8 3753 aa7.85□□□□□ -1.15
PRKAR2A-201ENST00000265563 LCE3AQ5TA76 89 aa7.82□□□□□ -1.16
PRKAR2A-201ENST00000265563 LORP23490 312 aaPredicted RBP7.79□□□□□ -1.16
PRKAR2A-201ENST00000265563 INE1O15225 51 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms