RNA–Protein interactions for RNA: ENST00000264638.8

CNTNAP1-201, Transcript of contactin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTNAP1, Length 5,276 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1-201ENST00000264638 FRYLO94915 3013 aa7.56□□□□□ -1.2
CNTNAP1-201ENST00000264638 ATMQ13315 3056 aa7.56□□□□□ -1.2
CNTNAP1-201ENST00000264638 KRTAP13-1Q8IUC0 172 aa7.56□□□□□ -1.2
CNTNAP1-201ENST00000264638 C20orf166-AS1Q96NR2 134 aa7.54□□□□□ -1.2
CNTNAP1-201ENST00000264638 TENM4Q6N022 2769 aa7.54□□□□□ -1.2
CNTNAP1-201ENST00000264638 COL12A1Q99715 3063 aa7.54□□□□□ -1.2
CNTNAP1-201ENST00000264638 UTP20O75691 2785 aaKnown RBP7.53□□□□□ -1.2
CNTNAP1-201ENST00000264638 TNRC18O15417 2968 aaPredicted RBP7.53□□□□□ -1.2
CNTNAP1-201ENST00000264638 KRTAP13-2Q52LG2 175 aa7.51□□□□□ -1.21
CNTNAP1-201ENST00000264638 NBEAQ8NFP9 2946 aa7.5□□□□□ -1.21
CNTNAP1-201ENST00000264638 NIPBLQ6KC79 2804 aaeCLIP7.5□□□□□ -1.21
CNTNAP1-201ENST00000264638 APCP25054 2843 aa7.48□□□□□ -1.21
CNTNAP1-201ENST00000264638 BOD1L1Q8NFC6 3051 aa7.46□□□□□ -1.21
CNTNAP1-201ENST00000264638 A8MUU9 505 aa7.46□□□□□ -1.22
CNTNAP1-201ENST00000264638 FREM2Q5SZK8 3169 aa7.45□□□□□ -1.22
CNTNAP1-201ENST00000264638 KALRNO60229 2985 aa7.43□□□□□ -1.22
CNTNAP1-201ENST00000264638 DMXL2Q8TDJ6 3036 aa7.42□□□□□ -1.22
CNTNAP1-201ENST00000264638 MYO15AQ9UKN7 3530 aa7.41□□□□□ -1.22
CNTNAP1-201ENST00000264638 LRBAP50851 2863 aa7.41□□□□□ -1.22
CNTNAP1-201ENST00000264638 ADGRG4Q8IZF6 3080 aa7.39□□□□□ -1.23
CNTNAP1-201ENST00000264638 USP34Q70CQ2 3546 aa7.36□□□□□ -1.23
CNTNAP1-201ENST00000264638 TNP1P09430 55 aa7.35□□□□□ -1.23
CNTNAP1-201ENST00000264638 ZZEF1O43149 2961 aa7.35□□□□□ -1.23
CNTNAP1-201ENST00000264638 PP632Q6XCG6 107 aa7.32□□□□□ -1.24
CNTNAP1-201ENST00000264638 C10orf95Q9H7T3 257 aa7.31□□□□□ -1.24
CNTNAP1-201ENST00000264638 DMXL1Q9Y485 3027 aa7.31□□□□□ -1.24
CNTNAP1-201ENST00000264638 CELSR2Q9HCU4 2923 aa7.3□□□□□ -1.24
CNTNAP1-201ENST00000264638 LOC400499M0QZD8 3231 aa7.3□□□□□ -1.24
CNTNAP1-201ENST00000264638 CRYBG3Q68DQ2 2970 aa7.27□□□□□ -1.25
CNTNAP1-201ENST00000264638 ASH1LQ9NR48 2969 aaKnown RBP7.26□□□□□ -1.25
CNTNAP1-201ENST00000264638 ZANQ9Y493 2812 aa7.24□□□□□ -1.25
CNTNAP1-201ENST00000264638 DCHS2Q6V1P9 2916 aa7.24□□□□□ -1.25
CNTNAP1-201ENST00000264638 KRTAP1-4P0C5Y4 121 aa7.21□□□□□ -1.25
CNTNAP1-201ENST00000264638 P0C880 135 aa7.18□□□□□ -1.26
CNTNAP1-201ENST00000264638 CFAP47Q6ZTR5 3102 aa7.17□□□□□ -1.26
CNTNAP1-201ENST00000264638 H0YAA0 97 aa7.12□□□□□ -1.27
CNTNAP1-201ENST00000264638 MUC3AQ02505 3323 aa7.12□□□□□ -1.27
CNTNAP1-201ENST00000264638 XP32Q5T750 250 aa7.11□□□□□ -1.27
CNTNAP1-201ENST00000264638 HRNRQ86YZ3 2850 aaPredicted RBP7.1□□□□□ -1.27
CNTNAP1-201ENST00000264638 NF1P21359 2839 aa7.09□□□□□ -1.27
CNTNAP1-201ENST00000264638 TENM3Q9P273 2699 aa7.08□□□□□ -1.28
CNTNAP1-201ENST00000264638 WDFY3Q8IZQ1 3526 aa7.07□□□□□ -1.28
CNTNAP1-201ENST00000264638 TPRXLQ17RH7 258 aa7.07□□□□□ -1.28
CNTNAP1-201ENST00000264638 DMDP11532 3685 aa7.06□□□□□ -1.28
CNTNAP1-201ENST00000264638 TENM1Q9UKZ4 2725 aa7.05□□□□□ -1.28
CNTNAP1-201ENST00000264638 FBN2P35556 2912 aa7□□□□□ -1.29
CNTNAP1-201ENST00000264638 TENM2Q9NT68 2774 aa6.98□□□□□ -1.29
CNTNAP1-201ENST00000264638 MXRA5Q9NR99 2828 aa6.96□□□□□ -1.3
CNTNAP1-201ENST00000264638 KRTAP10-8P60410 259 aa6.95□□□□□ -1.3
CNTNAP1-201ENST00000264638 LAMA5O15230 3695 aa6.95□□□□□ -1.3
CNTNAP1-201ENST00000264638 ASPMQ8IZT6 3477 aa6.95□□□□□ -1.3
CNTNAP1-201ENST00000264638 A0A1B0GVY2 172 aa6.93□□□□□ -1.3
CNTNAP1-201ENST00000264638 RELNP78509 3460 aa6.92□□□□□ -1.3
CNTNAP1-201ENST00000264638 KRTAP13-3Q3SY46 172 aa6.92□□□□□ -1.3
CNTNAP1-201ENST00000264638 DCHS1Q96JQ0 3298 aa6.89□□□□□ -1.31
CNTNAP1-201ENST00000264638 ZFHX4Q86UP3 3567 aa6.88□□□□□ -1.31
CNTNAP1-201ENST00000264638 CELSR1Q9NYQ6 3014 aa6.85□□□□□ -1.31
CNTNAP1-201ENST00000264638 KRTAP10-10P60014 251 aa6.78□□□□□ -1.32
CNTNAP1-201ENST00000264638 PKD1L1Q8TDX9 2849 aa6.77□□□□□ -1.33
CNTNAP1-201ENST00000264638 PDZD2O15018 2839 aa6.75□□□□□ -1.33
CNTNAP1-201ENST00000264638 SMG1Q96Q15 3661 aaKnown RBP6.74□□□□□ -1.33
CNTNAP1-201ENST00000264638 PRO2289Q9P1D8 64 aa6.7□□□□□ -1.34
CNTNAP1-201ENST00000264638 TGP01266 2768 aa6.68□□□□□ -1.34
CNTNAP1-201ENST00000264638 CSMD1Q96PZ7 3565 aa6.62□□□□□ -1.35
CNTNAP1-201ENST00000264638 KRTAP12-2P59991 146 aa6.6□□□□□ -1.35
CNTNAP1-201ENST00000264638 VWFP04275 2813 aa6.6□□□□□ -1.35
CNTNAP1-201ENST00000264638 KRTAP13-4Q3LI77 160 aa6.6□□□□□ -1.35
CNTNAP1-201ENST00000264638 OTOGQ6ZRI0 2925 aa6.57□□□□□ -1.36
CNTNAP1-201ENST00000264638 SVEP1Q4LDE5 3571 aa6.53□□□□□ -1.36
CNTNAP1-201ENST00000264638 SPENQ96T58 3664 aaKnown RBP6.51□□□□□ -1.37
CNTNAP1-201ENST00000264638 BSNQ9UPA5 3926 aa6.51□□□□□ -1.37
CNTNAP1-201ENST00000264638 KRTAP12-1P59990 96 aa6.51□□□□□ -1.37
CNTNAP1-201ENST00000264638 FBN1P35555 2871 aaKnown RBP6.46□□□□□ -1.37
CNTNAP1-201ENST00000264638 KRTAP15-1Q3LI76 137 aa6.4□□□□□ -1.39
CNTNAP1-201ENST00000264638 NBPF19A0A087WUL8 3843 aa6.39□□□□□ -1.39
CNTNAP1-201ENST00000264638 INE1O15225 51 aa6.38□□□□□ -1.39
CNTNAP1-201ENST00000264638 KRTAP3-1Q9BYR8 98 aa6.34□□□□□ -1.39
CNTNAP1-201ENST00000264638 SRRM2Q9UQ35 2752 aaKnown RBP6.33□□□□□ -1.4
CNTNAP1-201ENST00000264638 ZFHX3Q15911 3703 aa6.33□□□□□ -1.4
CNTNAP1-201ENST00000264638 ANK3Q12955 4377 aaKnown RBP6.33□□□□□ -1.4
CNTNAP1-201ENST00000264638 CSMD2Q7Z408 3487 aa6.31□□□□□ -1.4
CNTNAP1-201ENST00000264638 MT1HL1P0DM35 61 aa6.3□□□□□ -1.4
CNTNAP1-201ENST00000264638 FBN3Q75N90 2809 aa6.29□□□□□ -1.4
CNTNAP1-201ENST00000264638 CUBNO60494 3623 aa6.27□□□□□ -1.41
CNTNAP1-201ENST00000264638 KRTAP10-6P60371 365 aaPredicted RBP6.23□□□□□ -1.41
CNTNAP1-201ENST00000264638 MEGF8Q7Z7M0 2845 aa6.17□□□□□ -1.42
CNTNAP1-201ENST00000264638 KRTAP10-4P60372 401 aaPredicted RBP6.15□□□□□ -1.42
CNTNAP1-201ENST00000264638 COL7A1Q02388 2944 aa6.12□□□□□ -1.43
CNTNAP1-201ENST00000264638 VPS13CQ709C8 3753 aa6.11□□□□□ -1.43
CNTNAP1-201ENST00000264638 TRRAPQ9Y4A5 3859 aa6.07□□□□□ -1.44
CNTNAP1-201ENST00000264638 KRTAP4-5Q9BYR2 181 aa6.05□□□□□ -1.44
CNTNAP1-201ENST00000264638 KRTAP3-2Q9BYR7 98 aa5.98□□□□□ -1.45
CNTNAP1-201ENST00000264638 ZNF469Q96JG9 3925 aaPredicted RBP5.98□□□□□ -1.45
CNTNAP1-201ENST00000264638 KRTAP3-3Q9BYR6 98 aa5.95□□□□□ -1.46
CNTNAP1-201ENST00000264638 HUWE1Q7Z6Z7 4374 aaKnown RBP5.95□□□□□ -1.46
CNTNAP1-201ENST00000264638 KRTAP23-1A1A580 65 aa5.94□□□□□ -1.46
CNTNAP1-201ENST00000264638 KRTAP10-12P60413 245 aa5.87□□□□□ -1.47
CNTNAP1-201ENST00000264638 ALMS1Q8TCU4 4167 aa5.85□□□□□ -1.47
CNTNAP1-201ENST00000264638 AKAP9Q99996 3911 aa5.83□□□□□ -1.48
CNTNAP1-201ENST00000264638 KRTAP12-3P60328 96 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms