RNA–Protein interactions for RNA: ENST00000263511.8

CROCCP3-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CROCCP3, Length 5,368 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-201ENST00000263511 APCP25054 2843 aa9.24□□□□□ -0.93
CROCCP3-201ENST00000263511 COL12A1Q99715 3063 aa9.24□□□□□ -0.93
CROCCP3-201ENST00000263511 DMXL2Q8TDJ6 3036 aa9.21□□□□□ -0.94
CROCCP3-201ENST00000263511 KALRNO60229 2985 aa9.2□□□□□ -0.94
CROCCP3-201ENST00000263511 NBEAQ8NFP9 2946 aa9.17□□□□□ -0.94
CROCCP3-201ENST00000263511 VCANP13611 3396 aa9.16□□□□□ -0.94
CROCCP3-201ENST00000263511 FRYLO94915 3013 aa9.15□□□□□ -0.94
CROCCP3-201ENST00000263511 TNP1P09430 55 aa9.13□□□□□ -0.95
CROCCP3-201ENST00000263511 LRBAP50851 2863 aa9.13□□□□□ -0.95
CROCCP3-201ENST00000263511 LAMA1P25391 3075 aa9.13□□□□□ -0.95
CROCCP3-201ENST00000263511 SZT2Q5T011 3432 aa9.11□□□□□ -0.95
CROCCP3-201ENST00000263511 ASH1LQ9NR48 2969 aaKnown RBP9.11□□□□□ -0.95
CROCCP3-201ENST00000263511 DNAH14Q0VDD8 3507 aa9.11□□□□□ -0.95
CROCCP3-201ENST00000263511 CRYBG3Q68DQ2 2970 aa9.1□□□□□ -0.95
CROCCP3-201ENST00000263511 KRTAP1-4P0C5Y4 121 aa9.1□□□□□ -0.95
CROCCP3-201ENST00000263511 NDUFAF8A1L188 74 aa9.09□□□□□ -0.95
CROCCP3-201ENST00000263511 XP32Q5T750 250 aa9.07□□□□□ -0.96
CROCCP3-201ENST00000263511 CELSR2Q9HCU4 2923 aa9.06□□□□□ -0.96
CROCCP3-201ENST00000263511 ADGRG4Q8IZF6 3080 aa9.02□□□□□ -0.97
CROCCP3-201ENST00000263511 BOD1L1Q8NFC6 3051 aa9□□□□□ -0.97
CROCCP3-201ENST00000263511 ZZEF1O43149 2961 aa8.98□□□□□ -0.97
CROCCP3-201ENST00000263511 DCHS2Q6V1P9 2916 aa8.96□□□□□ -0.98
CROCCP3-201ENST00000263511 TPRXLQ17RH7 258 aa8.95□□□□□ -0.98
CROCCP3-201ENST00000263511 EYSQ5T1H1 3165 aa8.91□□□□□ -0.98
CROCCP3-201ENST00000263511 TENM3Q9P273 2699 aa8.9□□□□□ -0.98
CROCCP3-201ENST00000263511 COL6A3P12111 3177 aa8.9□□□□□ -0.98
CROCCP3-201ENST00000263511 KRTAP10-8P60410 259 aa8.9□□□□□ -0.99
CROCCP3-201ENST00000263511 A0A1B0GVY2 172 aa8.89□□□□□ -0.99
CROCCP3-201ENST00000263511 ZANQ9Y493 2812 aa8.85□□□□□ -0.99
CROCCP3-201ENST00000263511 PP632Q6XCG6 107 aa8.84□□□□□ -0.99
CROCCP3-201ENST00000263511 C10orf95Q9H7T3 257 aa8.84□□□□□ -0.99
CROCCP3-201ENST00000263511 CFAP47Q6ZTR5 3102 aa8.83□□□□□ -1
CROCCP3-201ENST00000263511 TENM1Q9UKZ4 2725 aa8.82□□□□□ -1
CROCCP3-201ENST00000263511 SPEGQ15772 3267 aa8.79□□□□□ -1
CROCCP3-201ENST00000263511 KRTAP10-10P60014 251 aa8.77□□□□□ -1.01
CROCCP3-201ENST00000263511 KRTAP13-3Q3SY46 172 aa8.76□□□□□ -1.01
CROCCP3-201ENST00000263511 NF1P21359 2839 aa8.75□□□□□ -1.01
CROCCP3-201ENST00000263511 H0YAA0 97 aa8.73□□□□□ -1.01
CROCCP3-201ENST00000263511 TENM2Q9NT68 2774 aa8.71□□□□□ -1.01
CROCCP3-201ENST00000263511 PRO2289Q9P1D8 64 aa8.67□□□□□ -1.02
CROCCP3-201ENST00000263511 HRNRQ86YZ3 2850 aaPredicted RBP8.61□□□□□ -1.03
CROCCP3-201ENST00000263511 FBN2P35556 2912 aa8.58□□□□□ -1.04
CROCCP3-201ENST00000263511 P0C880 135 aa8.57□□□□□ -1.04
CROCCP3-201ENST00000263511 TNRC18O15417 2968 aaPredicted RBP8.56□□□□□ -1.04
CROCCP3-201ENST00000263511 SPTBN5Q9NRC6 3674 aaKnown RBP8.55□□□□□ -1.04
CROCCP3-201ENST00000263511 DMXL1Q9Y485 3027 aa8.52□□□□□ -1.05
CROCCP3-201ENST00000263511 USP34Q70CQ2 3546 aa8.5□□□□□ -1.05
CROCCP3-201ENST00000263511 MXRA5Q9NR99 2828 aa8.49□□□□□ -1.05
CROCCP3-201ENST00000263511 LOC400499M0QZD8 3231 aa8.47□□□□□ -1.05
CROCCP3-201ENST00000263511 PKD1L1Q8TDX9 2849 aa8.46□□□□□ -1.05
CROCCP3-201ENST00000263511 TGP01266 2768 aa8.45□□□□□ -1.06
CROCCP3-201ENST00000263511 CELSR1Q9NYQ6 3014 aa8.44□□□□□ -1.06
CROCCP3-201ENST00000263511 MYO15AQ9UKN7 3530 aa8.42□□□□□ -1.06
CROCCP3-201ENST00000263511 PDZD2O15018 2839 aa8.3□□□□□ -1.08
CROCCP3-201ENST00000263511 VWFP04275 2813 aa8.3□□□□□ -1.08
CROCCP3-201ENST00000263511 KRTAP12-2P59991 146 aa8.19□□□□□ -1.1
CROCCP3-201ENST00000263511 WDFY3Q8IZQ1 3526 aa8.17□□□□□ -1.1
CROCCP3-201ENST00000263511 RELNP78509 3460 aa8.14□□□□□ -1.11
CROCCP3-201ENST00000263511 KRTAP13-4Q3LI77 160 aa8.13□□□□□ -1.11
CROCCP3-201ENST00000263511 DCHS1Q96JQ0 3298 aa8.1□□□□□ -1.11
CROCCP3-201ENST00000263511 KRTAP12-1P59990 96 aa8.07□□□□□ -1.12
CROCCP3-201ENST00000263511 KRTAP3-1Q9BYR8 98 aa8.04□□□□□ -1.12
CROCCP3-201ENST00000263511 SRRM2Q9UQ35 2752 aaKnown RBP8□□□□□ -1.13
CROCCP3-201ENST00000263511 ASPMQ8IZT6 3477 aa7.98□□□□□ -1.13
CROCCP3-201ENST00000263511 ZFHX4Q86UP3 3567 aa7.96□□□□□ -1.14
CROCCP3-201ENST00000263511 FBN1P35555 2871 aaKnown RBP7.95□□□□□ -1.14
CROCCP3-201ENST00000263511 LAMA5O15230 3695 aa7.94□□□□□ -1.14
CROCCP3-201ENST00000263511 OTOGQ6ZRI0 2925 aa7.91□□□□□ -1.14
CROCCP3-201ENST00000263511 MT1HL1P0DM35 61 aa7.84□□□□□ -1.15
CROCCP3-201ENST00000263511 KRTAP15-1Q3LI76 137 aa7.83□□□□□ -1.16
CROCCP3-201ENST00000263511 KRTAP10-6P60371 365 aaPredicted RBP7.81□□□□□ -1.16
CROCCP3-201ENST00000263511 FBN3Q75N90 2809 aa7.8□□□□□ -1.16
CROCCP3-201ENST00000263511 NBPF19A0A087WUL8 3843 aa7.79□□□□□ -1.16
CROCCP3-201ENST00000263511 CSMD1Q96PZ7 3565 aa7.78□□□□□ -1.16
CROCCP3-201ENST00000263511 MEGF8Q7Z7M0 2845 aa7.7□□□□□ -1.18
CROCCP3-201ENST00000263511 DMDP11532 3685 aa7.7□□□□□ -1.18
CROCCP3-201ENST00000263511 ZFHX3Q15911 3703 aa7.69□□□□□ -1.18
CROCCP3-201ENST00000263511 MUC3AQ02505 3323 aa7.69□□□□□ -1.18
CROCCP3-201ENST00000263511 SMG1Q96Q15 3661 aaKnown RBP7.65□□□□□ -1.18
CROCCP3-201ENST00000263511 COL7A1Q02388 2944 aa7.64□□□□□ -1.19
CROCCP3-201ENST00000263511 CUBNO60494 3623 aa7.62□□□□□ -1.19
CROCCP3-201ENST00000263511 ANK3Q12955 4377 aaKnown RBP7.6□□□□□ -1.19
CROCCP3-201ENST00000263511 SVEP1Q4LDE5 3571 aa7.57□□□□□ -1.2
CROCCP3-201ENST00000263511 KRTAP10-4P60372 401 aaPredicted RBP7.57□□□□□ -1.2
CROCCP3-201ENST00000263511 KRTAP4-5Q9BYR2 181 aa7.56□□□□□ -1.2
CROCCP3-201ENST00000263511 KRTAP10-12P60413 245 aa7.53□□□□□ -1.2
CROCCP3-201ENST00000263511 KRTAP3-3Q9BYR6 98 aa7.52□□□□□ -1.21
CROCCP3-201ENST00000263511 KRTAP3-2Q9BYR7 98 aa7.52□□□□□ -1.21
CROCCP3-201ENST00000263511 CSMD2Q7Z408 3487 aa7.43□□□□□ -1.22
CROCCP3-201ENST00000263511 INE1O15225 51 aa7.37□□□□□ -1.23
CROCCP3-201ENST00000263511 CRCT1Q9UGL9 99 aa7.37□□□□□ -1.23
CROCCP3-201ENST00000263511 TRRAPQ9Y4A5 3859 aa7.32□□□□□ -1.24
CROCCP3-201ENST00000263511 KRTAP12-3P60328 96 aa7.3□□□□□ -1.24
CROCCP3-201ENST00000263511 SPENQ96T58 3664 aaKnown RBP7.28□□□□□ -1.24
CROCCP3-201ENST00000263511 HUWE1Q7Z6Z7 4374 aaKnown RBP7.21□□□□□ -1.25
CROCCP3-201ENST00000263511 KRTAP23-1A1A580 65 aa7.21□□□□□ -1.26
CROCCP3-201ENST00000263511 LCE3AQ5TA76 89 aa7.16□□□□□ -1.26
CROCCP3-201ENST00000263511 ALMS1Q8TCU4 4167 aa7.13□□□□□ -1.27
CROCCP3-201ENST00000263511 LORP23490 312 aaPredicted RBP7.11□□□□□ -1.27
CROCCP3-201ENST00000263511 KRTAP8-1Q8IUC2 63 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 215.3 ms