RNA–Protein interactions for RNA: ENST00000261900.7

CCNT1-201, Transcript of cyclin T1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNT1, Length 6,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-201ENST00000261900 CFAP54Q96N23 3096 aa4.59□□□□□ -1.68
CCNT1-201ENST00000261900 TENM1Q9UKZ4 2725 aa4.57□□□□□ -1.68
CCNT1-201ENST00000261900 C10orf95Q9H7T3 257 aa4.56□□□□□ -1.68
CCNT1-201ENST00000261900 NIPBLQ6KC79 2804 aaeCLIP4.55□□□□□ -1.68
CCNT1-201ENST00000261900 PP632Q6XCG6 107 aa4.55□□□□□ -1.68
CCNT1-201ENST00000261900 CHD7Q9P2D1 2997 aa4.55□□□□□ -1.68
CCNT1-201ENST00000261900 SPEGQ15772 3267 aa4.54□□□□□ -1.68
CCNT1-201ENST00000261900 TRIOO75962 3097 aa4.54□□□□□ -1.68
CCNT1-201ENST00000261900 CRYBG3Q68DQ2 2970 aa4.54□□□□□ -1.68
CCNT1-201ENST00000261900 DMDP11532 3685 aa4.54□□□□□ -1.68
CCNT1-201ENST00000261900 A0A0C4DFX4 3053 aa4.54□□□□□ -1.68
CCNT1-201ENST00000261900 TACC2O95359 2948 aa4.53□□□□□ -1.68
CCNT1-201ENST00000261900 SPTBN5Q9NRC6 3674 aaKnown RBP4.52□□□□□ -1.69
CCNT1-201ENST00000261900 KRTAP7-1Q8IUC3 87 aa4.51□□□□□ -1.69
CCNT1-201ENST00000261900 KALRNO60229 2985 aa4.5□□□□□ -1.69
CCNT1-201ENST00000261900 FRYLO94915 3013 aa4.49□□□□□ -1.69
CCNT1-201ENST00000261900 H3BS24 57 aa4.49□□□□□ -1.69
CCNT1-201ENST00000261900 CYSTM1Q9H1C7 97 aa4.48□□□□□ -1.69
CCNT1-201ENST00000261900 KRTAP16-1A8MUX0 517 aa4.47□□□□□ -1.69
CCNT1-201ENST00000261900 KRTAP25-1Q3LHN0 102 aa4.47□□□□□ -1.69
CCNT1-201ENST00000261900 P0C880 135 aa4.47□□□□□ -1.69
CCNT1-201ENST00000261900 APCP25054 2843 aa4.46□□□□□ -1.69
CCNT1-201ENST00000261900 KRTAP1-4P0C5Y4 121 aa4.46□□□□□ -1.7
CCNT1-201ENST00000261900 NF1P21359 2839 aa4.45□□□□□ -1.7
CCNT1-201ENST00000261900 WDFY4Q6ZS81 3184 aa4.43□□□□□ -1.7
CCNT1-201ENST00000261900 KRTAP13-3Q3SY46 172 aa4.41□□□□□ -1.7
CCNT1-201ENST00000261900 VPS13AQ96RL7 3174 aa4.41□□□□□ -1.7
CCNT1-201ENST00000261900 COL6A3P12111 3177 aa4.4□□□□□ -1.71
CCNT1-201ENST00000261900 DMXL2Q8TDJ6 3036 aa4.38□□□□□ -1.71
CCNT1-201ENST00000261900 LAMA1P25391 3075 aa4.37□□□□□ -1.71
CCNT1-201ENST00000261900 TNRC18O15417 2968 aaPredicted RBP4.37□□□□□ -1.71
CCNT1-201ENST00000261900 CELSR2Q9HCU4 2923 aa4.37□□□□□ -1.71
CCNT1-201ENST00000261900 NDUFAF8A1L188 74 aa4.36□□□□□ -1.71
CCNT1-201ENST00000261900 PKD1L1Q8TDX9 2849 aa4.36□□□□□ -1.71
CCNT1-201ENST00000261900 PDZD2O15018 2839 aa4.36□□□□□ -1.71
CCNT1-201ENST00000261900 LOC400499M0QZD8 3231 aa4.34□□□□□ -1.71
CCNT1-201ENST00000261900 FBN3Q75N90 2809 aa4.33□□□□□ -1.72
CCNT1-201ENST00000261900 SPENQ96T58 3664 aaKnown RBP4.32□□□□□ -1.72
CCNT1-201ENST00000261900 ASPMQ8IZT6 3477 aa4.31□□□□□ -1.72
CCNT1-201ENST00000261900 ASH1LQ9NR48 2969 aaKnown RBP4.31□□□□□ -1.72
CCNT1-201ENST00000261900 DCHS2Q6V1P9 2916 aa4.31□□□□□ -1.72
CCNT1-201ENST00000261900 COL12A1Q99715 3063 aa4.29□□□□□ -1.72
CCNT1-201ENST00000261900 LRBAP50851 2863 aa4.29□□□□□ -1.72
CCNT1-201ENST00000261900 ZFHX3Q15911 3703 aa4.29□□□□□ -1.72
CCNT1-201ENST00000261900 CFAP47Q6ZTR5 3102 aa4.28□□□□□ -1.72
CCNT1-201ENST00000261900 SRRM2Q9UQ35 2752 aaKnown RBP4.27□□□□□ -1.73
CCNT1-201ENST00000261900 A6NN06 94 aa4.26□□□□□ -1.73
CCNT1-201ENST00000261900 ZFHX4Q86UP3 3567 aa4.24□□□□□ -1.73
CCNT1-201ENST00000261900 ATMQ13315 3056 aa4.22□□□□□ -1.73
CCNT1-201ENST00000261900 VWFP04275 2813 aa4.21□□□□□ -1.73
CCNT1-201ENST00000261900 CELSR3Q9NYQ7 3312 aa4.2□□□□□ -1.74
CCNT1-201ENST00000261900 DCHS1Q96JQ0 3298 aa4.17□□□□□ -1.74
CCNT1-201ENST00000261900 FREM2Q5SZK8 3169 aa4.17□□□□□ -1.74
CCNT1-201ENST00000261900 LAMA5O15230 3695 aa4.16□□□□□ -1.74
CCNT1-201ENST00000261900 ZZEF1O43149 2961 aa4.15□□□□□ -1.74
CCNT1-201ENST00000261900 DMXL1Q9Y485 3027 aa4.15□□□□□ -1.75
CCNT1-201ENST00000261900 H0YAA0 97 aa4.14□□□□□ -1.75
CCNT1-201ENST00000261900 TGP01266 2768 aa4.12□□□□□ -1.75
CCNT1-201ENST00000261900 MXRA5Q9NR99 2828 aa4.08□□□□□ -1.76
CCNT1-201ENST00000261900 BOD1L1Q8NFC6 3051 aa4.08□□□□□ -1.76
CCNT1-201ENST00000261900 NBEAQ8NFP9 2946 aa4.08□□□□□ -1.76
CCNT1-201ENST00000261900 KRTAP12-2P59991 146 aa4.07□□□□□ -1.76
CCNT1-201ENST00000261900 KRTAP15-1Q3LI76 137 aa4.06□□□□□ -1.76
CCNT1-201ENST00000261900 ZANQ9Y493 2812 aa4.06□□□□□ -1.76
CCNT1-201ENST00000261900 KRTAP13-4Q3LI77 160 aa4.06□□□□□ -1.76
CCNT1-201ENST00000261900 FBN2P35556 2912 aa4.04□□□□□ -1.76
CCNT1-201ENST00000261900 RELNP78509 3460 aa4.02□□□□□ -1.77
CCNT1-201ENST00000261900 CELSR1Q9NYQ6 3014 aa4.01□□□□□ -1.77
CCNT1-201ENST00000261900 BSNQ9UPA5 3926 aa3.97□□□□□ -1.77
CCNT1-201ENST00000261900 CRCT1Q9UGL9 99 aa3.96□□□□□ -1.78
CCNT1-201ENST00000261900 SMG1Q96Q15 3661 aaKnown RBP3.96□□□□□ -1.78
CCNT1-201ENST00000261900 ADGRG4Q8IZF6 3080 aa3.93□□□□□ -1.78
CCNT1-201ENST00000261900 CSMD2Q7Z408 3487 aa3.92□□□□□ -1.78
CCNT1-201ENST00000261900 KRTAP12-1P59990 96 aa3.91□□□□□ -1.78
CCNT1-201ENST00000261900 CSMD1Q96PZ7 3565 aa3.89□□□□□ -1.79
CCNT1-201ENST00000261900 MT1HL1P0DM35 61 aa3.88□□□□□ -1.79
CCNT1-201ENST00000261900 KRTAP10-12P60413 245 aa3.88□□□□□ -1.79
CCNT1-201ENST00000261900 SVEP1Q4LDE5 3571 aa3.83□□□□□ -1.8
CCNT1-201ENST00000261900 VPS13CQ709C8 3753 aa3.83□□□□□ -1.8
CCNT1-201ENST00000261900 COL7A1Q02388 2944 aa3.81□□□□□ -1.8
CCNT1-201ENST00000261900 HRNRQ86YZ3 2850 aaPredicted RBP3.8□□□□□ -1.8
CCNT1-201ENST00000261900 KRTAP4-5Q9BYR2 181 aa3.78□□□□□ -1.8
CCNT1-201ENST00000261900 LORP23490 312 aaPredicted RBP3.77□□□□□ -1.81
CCNT1-201ENST00000261900 KRTAP3-1Q9BYR8 98 aa3.77□□□□□ -1.81
CCNT1-201ENST00000261900 KRTAP8-1Q8IUC2 63 aa3.77□□□□□ -1.81
CCNT1-201ENST00000261900 FBN1P35555 2871 aaKnown RBP3.73□□□□□ -1.81
CCNT1-201ENST00000261900 KRTAP12-3P60328 96 aa3.71□□□□□ -1.82
CCNT1-201ENST00000261900 MEGF8Q7Z7M0 2845 aa3.7□□□□□ -1.82
CCNT1-201ENST00000261900 KRTAP10-6P60371 365 aaPredicted RBP3.69□□□□□ -1.82
CCNT1-201ENST00000261900 NBPF19A0A087WUL8 3843 aa3.66□□□□□ -1.82
CCNT1-201ENST00000261900 INE1O15225 51 aa3.62□□□□□ -1.83
CCNT1-201ENST00000261900 ZNF469Q96JG9 3925 aaPredicted RBP3.62□□□□□ -1.83
CCNT1-201ENST00000261900 OTOGQ6ZRI0 2925 aa3.6□□□□□ -1.83
CCNT1-201ENST00000261900 KRTAP10-5P60370 271 aa3.58□□□□□ -1.84
CCNT1-201ENST00000261900 KRTAP10-4P60372 401 aaPredicted RBP3.58□□□□□ -1.84
CCNT1-201ENST00000261900 AKAP9Q99996 3911 aa3.56□□□□□ -1.84
CCNT1-201ENST00000261900 CUBNO60494 3623 aa3.56□□□□□ -1.84
CCNT1-201ENST00000261900 LCE3AQ5TA76 89 aa3.54□□□□□ -1.84
CCNT1-201ENST00000261900 KRTAP23-1A1A580 65 aa3.54□□□□□ -1.84
CCNT1-201ENST00000261900 KRTAP10-7P60409 375 aaPredicted RBP3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms