RNA–Protein interactions for RNA: ENST00000260777.14

SHTN1-201, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHTN1, Length 5,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-201ENST00000260777 C20orf166-AS1Q96NR2 134 aa8.71□□□□□ -1.02
SHTN1-201ENST00000260777 COL12A1Q99715 3063 aa8.71□□□□□ -1.02
SHTN1-201ENST00000260777 BOD1L1Q8NFC6 3051 aa8.7□□□□□ -1.02
SHTN1-201ENST00000260777 APCP25054 2843 aa8.69□□□□□ -1.02
SHTN1-201ENST00000260777 TACC2O95359 2948 aa8.69□□□□□ -1.02
SHTN1-201ENST00000260777 COL6A3P12111 3177 aa8.69□□□□□ -1.02
SHTN1-201ENST00000260777 FRYLO94915 3013 aa8.64□□□□□ -1.03
SHTN1-201ENST00000260777 DMXL2Q8TDJ6 3036 aa8.61□□□□□ -1.03
SHTN1-201ENST00000260777 NIPBLQ6KC79 2804 aaeCLIP8.59□□□□□ -1.03
SHTN1-201ENST00000260777 ASH1LQ9NR48 2969 aaKnown RBP8.58□□□□□ -1.04
SHTN1-201ENST00000260777 KRTAP1-4P0C5Y4 121 aa8.58□□□□□ -1.04
SHTN1-201ENST00000260777 HIVEP1P15822 2718 aa8.58□□□□□ -1.04
SHTN1-201ENST00000260777 KRTAP16-1A8MUX0 517 aa8.57□□□□□ -1.04
SHTN1-201ENST00000260777 ZZEF1O43149 2961 aa8.55□□□□□ -1.04
SHTN1-201ENST00000260777 EYSQ5T1H1 3165 aa8.51□□□□□ -1.05
SHTN1-201ENST00000260777 HRNRQ86YZ3 2850 aaPredicted RBP8.51□□□□□ -1.05
SHTN1-201ENST00000260777 SPTBN5Q9NRC6 3674 aaKnown RBP8.48□□□□□ -1.05
SHTN1-201ENST00000260777 NDUFAF8A1L188 74 aa8.48□□□□□ -1.05
SHTN1-201ENST00000260777 KRTAP21-3Q3LHN1 58 aa8.47□□□□□ -1.05
SHTN1-201ENST00000260777 CELSR2Q9HCU4 2923 aa8.44□□□□□ -1.06
SHTN1-201ENST00000260777 ZANQ9Y493 2812 aa8.44□□□□□ -1.06
SHTN1-201ENST00000260777 H0YAA0 97 aa8.42□□□□□ -1.06
SHTN1-201ENST00000260777 CFAP47Q6ZTR5 3102 aa8.4□□□□□ -1.06
SHTN1-201ENST00000260777 XP32Q5T750 250 aa8.4□□□□□ -1.07
SHTN1-201ENST00000260777 TNP1P09430 55 aa8.39□□□□□ -1.07
SHTN1-201ENST00000260777 USP34Q70CQ2 3546 aa8.37□□□□□ -1.07
SHTN1-201ENST00000260777 DCHS2Q6V1P9 2916 aa8.36□□□□□ -1.07
SHTN1-201ENST00000260777 TNRC18O15417 2968 aaPredicted RBP8.35□□□□□ -1.07
SHTN1-201ENST00000260777 SPEGQ15772 3267 aa8.31□□□□□ -1.08
SHTN1-201ENST00000260777 PP632Q6XCG6 107 aa8.3□□□□□ -1.08
SHTN1-201ENST00000260777 KRTAP13-3Q3SY46 172 aa8.29□□□□□ -1.08
SHTN1-201ENST00000260777 REV3LO60673 3130 aa8.28□□□□□ -1.08
SHTN1-201ENST00000260777 DMXL1Q9Y485 3027 aa8.28□□□□□ -1.08
SHTN1-201ENST00000260777 TENM4Q6N022 2769 aa8.27□□□□□ -1.09
SHTN1-201ENST00000260777 C10orf95Q9H7T3 257 aa8.27□□□□□ -1.09
SHTN1-201ENST00000260777 FBN2P35556 2912 aa8.24□□□□□ -1.09
SHTN1-201ENST00000260777 LOC400499M0QZD8 3231 aa8.22□□□□□ -1.09
SHTN1-201ENST00000260777 CRYBG3Q68DQ2 2970 aa8.22□□□□□ -1.09
SHTN1-201ENST00000260777 TPRXLQ17RH7 258 aa8.21□□□□□ -1.1
SHTN1-201ENST00000260777 P0C880 135 aa8.16□□□□□ -1.1
SHTN1-201ENST00000260777 NF1P21359 2839 aa8.15□□□□□ -1.1
SHTN1-201ENST00000260777 MXRA5Q9NR99 2828 aa8.06□□□□□ -1.12
SHTN1-201ENST00000260777 KRTAP10-8P60410 259 aa8.02□□□□□ -1.13
SHTN1-201ENST00000260777 CELSR1Q9NYQ6 3014 aa8.01□□□□□ -1.13
SHTN1-201ENST00000260777 TENM3Q9P273 2699 aa8.01□□□□□ -1.13
SHTN1-201ENST00000260777 A0A1B0GVY2 172 aa8□□□□□ -1.13
SHTN1-201ENST00000260777 MYO15AQ9UKN7 3530 aa7.98□□□□□ -1.13
SHTN1-201ENST00000260777 TGP01266 2768 aa7.98□□□□□ -1.13
SHTN1-201ENST00000260777 TENM1Q9UKZ4 2725 aa7.91□□□□□ -1.14
SHTN1-201ENST00000260777 KRTAP12-2P59991 146 aa7.87□□□□□ -1.15
SHTN1-201ENST00000260777 TENM2Q9NT68 2774 aa7.86□□□□□ -1.15
SHTN1-201ENST00000260777 RELNP78509 3460 aa7.86□□□□□ -1.15
SHTN1-201ENST00000260777 WDFY3Q8IZQ1 3526 aa7.85□□□□□ -1.15
SHTN1-201ENST00000260777 KRTAP10-10P60014 251 aa7.82□□□□□ -1.16
SHTN1-201ENST00000260777 KRTAP3-1Q9BYR8 98 aa7.82□□□□□ -1.16
SHTN1-201ENST00000260777 PDZD2O15018 2839 aa7.8□□□□□ -1.16
SHTN1-201ENST00000260777 KRTAP12-1P59990 96 aa7.76□□□□□ -1.17
SHTN1-201ENST00000260777 PRO2289Q9P1D8 64 aa7.75□□□□□ -1.17
SHTN1-201ENST00000260777 ZFHX4Q86UP3 3567 aa7.72□□□□□ -1.17
SHTN1-201ENST00000260777 KRTAP13-4Q3LI77 160 aa7.71□□□□□ -1.17
SHTN1-201ENST00000260777 ASPMQ8IZT6 3477 aa7.69□□□□□ -1.18
SHTN1-201ENST00000260777 DCHS1Q96JQ0 3298 aa7.65□□□□□ -1.18
SHTN1-201ENST00000260777 CSMD1Q96PZ7 3565 aa7.62□□□□□ -1.19
SHTN1-201ENST00000260777 KRTAP10-6P60371 365 aaPredicted RBP7.61□□□□□ -1.19
SHTN1-201ENST00000260777 LAMA5O15230 3695 aa7.59□□□□□ -1.19
SHTN1-201ENST00000260777 ANK3Q12955 4377 aaKnown RBP7.57□□□□□ -1.2
SHTN1-201ENST00000260777 PKD1L1Q8TDX9 2849 aa7.54□□□□□ -1.2
SHTN1-201ENST00000260777 SMG1Q96Q15 3661 aaKnown RBP7.53□□□□□ -1.2
SHTN1-201ENST00000260777 VWFP04275 2813 aa7.52□□□□□ -1.21
SHTN1-201ENST00000260777 OTOGQ6ZRI0 2925 aa7.52□□□□□ -1.21
SHTN1-201ENST00000260777 NBPF19A0A087WUL8 3843 aa7.49□□□□□ -1.21
SHTN1-201ENST00000260777 DMDP11532 3685 aa7.43□□□□□ -1.22
SHTN1-201ENST00000260777 FBN1P35555 2871 aaKnown RBP7.43□□□□□ -1.22
SHTN1-201ENST00000260777 KRTAP3-2Q9BYR7 98 aa7.36□□□□□ -1.23
SHTN1-201ENST00000260777 FBN3Q75N90 2809 aa7.36□□□□□ -1.23
SHTN1-201ENST00000260777 KRTAP3-3Q9BYR6 98 aa7.34□□□□□ -1.23
SHTN1-201ENST00000260777 SVEP1Q4LDE5 3571 aa7.31□□□□□ -1.24
SHTN1-201ENST00000260777 MT1HL1P0DM35 61 aa7.29□□□□□ -1.24
SHTN1-201ENST00000260777 KRTAP15-1Q3LI76 137 aa7.26□□□□□ -1.25
SHTN1-201ENST00000260777 MEGF8Q7Z7M0 2845 aa7.26□□□□□ -1.25
SHTN1-201ENST00000260777 MUC3AQ02505 3323 aa7.25□□□□□ -1.25
SHTN1-201ENST00000260777 KRTAP10-4P60372 401 aaPredicted RBP7.23□□□□□ -1.25
SHTN1-201ENST00000260777 SPENQ96T58 3664 aaKnown RBP7.19□□□□□ -1.26
SHTN1-201ENST00000260777 TRRAPQ9Y4A5 3859 aa7.19□□□□□ -1.26
SHTN1-201ENST00000260777 SRRM2Q9UQ35 2752 aaKnown RBP7.18□□□□□ -1.26
SHTN1-201ENST00000260777 HUWE1Q7Z6Z7 4374 aaKnown RBP7.17□□□□□ -1.26
SHTN1-201ENST00000260777 ZFHX3Q15911 3703 aa7.17□□□□□ -1.26
SHTN1-201ENST00000260777 BSNQ9UPA5 3926 aa7.14□□□□□ -1.27
SHTN1-201ENST00000260777 CSMD2Q7Z408 3487 aa7.11□□□□□ -1.27
SHTN1-201ENST00000260777 CUBNO60494 3623 aa7.01□□□□□ -1.29
SHTN1-201ENST00000260777 COL7A1Q02388 2944 aa7.01□□□□□ -1.29
SHTN1-201ENST00000260777 INE1O15225 51 aa7□□□□□ -1.29
SHTN1-201ENST00000260777 KRTAP23-1A1A580 65 aa6.97□□□□□ -1.29
SHTN1-201ENST00000260777 KRTAP10-12P60413 245 aa6.95□□□□□ -1.3
SHTN1-201ENST00000260777 ALMS1Q8TCU4 4167 aa6.94□□□□□ -1.3
SHTN1-201ENST00000260777 VPS13CQ709C8 3753 aa6.89□□□□□ -1.31
SHTN1-201ENST00000260777 KRTAP4-5Q9BYR2 181 aa6.87□□□□□ -1.31
SHTN1-201ENST00000260777 LORP23490 312 aaPredicted RBP6.81□□□□□ -1.32
SHTN1-201ENST00000260777 KRTAP12-3P60328 96 aa6.8□□□□□ -1.32
SHTN1-201ENST00000260777 DNAH9Q9NYC9 4486 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms