RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 KRTAP4-7Q9BYR0 210 aa2.1□□□□□ -2.07
RNF38-201ENST00000259605 HIVEP1P15822 2718 aa2.09□□□□□ -2.07
RNF38-201ENST00000259605 KRTAP4-8A0A0G2JLE6 195 aa2.08□□□□□ -2.08
RNF38-201ENST00000259605 KRTAP9-2Q9BYQ4 174 aa2.08□□□□□ -2.08
RNF38-201ENST00000259605 KRTAP11-1Q8IUC1 163 aa2.08□□□□□ -2.08
RNF38-201ENST00000259605 COL6A3P12111 3177 aa2.07□□□□□ -2.08
RNF38-201ENST00000259605 XIRP2A4UGR9 3374 aa2.06□□□□□ -2.08
RNF38-201ENST00000259605 TENM3Q9P273 2699 aa2.05□□□□□ -2.08
RNF38-201ENST00000259605 TENM2Q9NT68 2774 aa2.05□□□□□ -2.08
RNF38-201ENST00000259605 RANBP2P49792 3224 aaKnown RBP2.04□□□□□ -2.08
RNF38-201ENST00000259605 KRTAP4-12Q9BQ66 201 aa2.04□□□□□ -2.08
RNF38-201ENST00000259605 FBN2P35556 2912 aa2.04□□□□□ -2.08
RNF38-201ENST00000259605 A0A0C4DFX4 3053 aa2.04□□□□□ -2.08
RNF38-201ENST00000259605 KRTAP23-1A1A580 65 aa2.04□□□□□ -2.08
RNF38-201ENST00000259605 RELNP78509 3460 aa2.03□□□□□ -2.08
RNF38-201ENST00000259605 VCANP13611 3396 aa2.03□□□□□ -2.08
RNF38-201ENST00000259605 ITPR1Q14643 2758 aa2.03□□□□□ -2.08
RNF38-201ENST00000259605 KRTAP9-9Q9BYP9 154 aa2.03□□□□□ -2.08
RNF38-201ENST00000259605 KRTAP9-4Q9BYQ2 154 aa2.03□□□□□ -2.08
RNF38-201ENST00000259605 DNAH14Q0VDD8 3507 aa2.02□□□□□ -2.09
RNF38-201ENST00000259605 ZFHX4Q86UP3 3567 aa2.02□□□□□ -2.09
RNF38-201ENST00000259605 KRTAP7-1Q8IUC3 87 aa2.02□□□□□ -2.09
RNF38-201ENST00000259605 CFAP54Q96N23 3096 aa2.02□□□□□ -2.09
RNF38-201ENST00000259605 HTTP42858 3142 aa2.01□□□□□ -2.09
RNF38-201ENST00000259605 H0YAA0 97 aa2□□□□□ -2.09
RNF38-201ENST00000259605 WDFY3Q8IZQ1 3526 aa2□□□□□ -2.09
RNF38-201ENST00000259605 KRTAP5-6Q6L8G9 129 aaPredicted RBP2□□□□□ -2.09
RNF38-201ENST00000259605 MKI67P46013 3256 aaKnown RBP2□□□□□ -2.09
RNF38-201ENST00000259605 ZFHX3Q15911 3703 aa2□□□□□ -2.09
RNF38-201ENST00000259605 BRCA2P51587 3418 aa1.99□□□□□ -2.09
RNF38-201ENST00000259605 PRRC2CQ9Y520 2896 aaKnown RBP1.99□□□□□ -2.09
RNF38-201ENST00000259605 SZT2Q5T011 3432 aa1.99□□□□□ -2.09
RNF38-201ENST00000259605 KRTAP9-6A0A140TA67 174 aa1.98□□□□□ -2.09
RNF38-201ENST00000259605 TENM1Q9UKZ4 2725 aa1.98□□□□□ -2.09
RNF38-201ENST00000259605 KRTAP15-1Q3LI76 137 aa1.97□□□□□ -2.09
RNF38-201ENST00000259605 LAMA3Q16787 3333 aa1.97□□□□□ -2.09
RNF38-201ENST00000259605 DSPP15924 2871 aaKnown RBP1.97□□□□□ -2.09
RNF38-201ENST00000259605 MUC3AQ02505 3323 aa1.96□□□□□ -2.09
RNF38-201ENST00000259605 SPTBN5Q9NRC6 3674 aaKnown RBP1.96□□□□□ -2.1
RNF38-201ENST00000259605 KRTAP4-9Q9BYQ8 210 aa1.95□□□□□ -2.1
RNF38-201ENST00000259605 REV3LO60673 3130 aa1.94□□□□□ -2.1
RNF38-201ENST00000259605 LAMA2P24043 3122 aaKnown RBP1.93□□□□□ -2.1
RNF38-201ENST00000259605 NIPBLQ6KC79 2804 aaeCLIP1.93□□□□□ -2.1
RNF38-201ENST00000259605 UNC80Q8N2C7 3258 aa1.93□□□□□ -2.1
RNF38-201ENST00000259605 CHD7Q9P2D1 2997 aa1.93□□□□□ -2.1
RNF38-201ENST00000259605 KRTAP13-4Q3LI77 160 aa1.92□□□□□ -2.1
RNF38-201ENST00000259605 DMDP11532 3685 aa1.92□□□□□ -2.1
RNF38-201ENST00000259605 SMG1Q96Q15 3661 aaKnown RBP1.91□□□□□ -2.1
RNF38-201ENST00000259605 KRTAP12-2P59991 146 aa1.91□□□□□ -2.1
RNF38-201ENST00000259605 KRTAP8-1Q8IUC2 63 aa1.9□□□□□ -2.1
RNF38-201ENST00000259605 FRYQ5TBA9 3013 aa1.9□□□□□ -2.11
RNF38-201ENST00000259605 SPEGQ15772 3267 aa1.89□□□□□ -2.11
RNF38-201ENST00000259605 BIRC6Q9NR09 4857 aa1.89□□□□□ -2.11
RNF38-201ENST00000259605 NBEAL2Q6ZNJ1 2754 aa1.89□□□□□ -2.11
RNF38-201ENST00000259605 ASPMQ8IZT6 3477 aa1.89□□□□□ -2.11
RNF38-201ENST00000259605 KRTAP10-12P60413 245 aa1.89□□□□□ -2.11
RNF38-201ENST00000259605 MYO15AQ9UKN7 3530 aa1.88□□□□□ -2.11
RNF38-201ENST00000259605 EYSQ5T1H1 3165 aa1.88□□□□□ -2.11
RNF38-201ENST00000259605 CRCT1Q9UGL9 99 aa1.88□□□□□ -2.11
RNF38-201ENST00000259605 APCP25054 2843 aa1.87□□□□□ -2.11
RNF38-201ENST00000259605 CRYBG3Q68DQ2 2970 aa1.87□□□□□ -2.11
RNF38-201ENST00000259605 KALRNO60229 2985 aa1.87□□□□□ -2.11
RNF38-201ENST00000259605 MT1HL1P0DM35 61 aa1.87□□□□□ -2.11
RNF38-201ENST00000259605 KRTAP3-1Q9BYR8 98 aa1.87□□□□□ -2.11
RNF38-201ENST00000259605 CELSR3Q9NYQ7 3312 aa1.86□□□□□ -2.11
RNF38-201ENST00000259605 OTOGQ6ZRI0 2925 aa1.86□□□□□ -2.11
RNF38-201ENST00000259605 KRTAP10-6P60371 365 aaPredicted RBP1.86□□□□□ -2.11
RNF38-201ENST00000259605 FBN1P35555 2871 aaKnown RBP1.86□□□□□ -2.11
RNF38-201ENST00000259605 SPENQ96T58 3664 aaKnown RBP1.86□□□□□ -2.11
RNF38-201ENST00000259605 DNAH12Q6ZR08 3092 aa1.86□□□□□ -2.11
RNF38-201ENST00000259605 NF1P21359 2839 aa1.85□□□□□ -2.11
RNF38-201ENST00000259605 PDZD2O15018 2839 aa1.85□□□□□ -2.11
RNF38-201ENST00000259605 CDH23Q9H251 3354 aa1.85□□□□□ -2.11
RNF38-201ENST00000259605 LOC400499M0QZD8 3231 aa1.85□□□□□ -2.11
RNF38-201ENST00000259605 LAMA1P25391 3075 aa1.85□□□□□ -2.11
RNF38-201ENST00000259605 CFAP47Q6ZTR5 3102 aa1.84□□□□□ -2.11
RNF38-201ENST00000259605 TRIOO75962 3097 aa1.84□□□□□ -2.11
RNF38-201ENST00000259605 KRTAP10-7P60409 375 aaPredicted RBP1.84□□□□□ -2.11
RNF38-201ENST00000259605 PRUNE2Q8WUY3 3088 aa1.84□□□□□ -2.12
RNF38-201ENST00000259605 DMXL1Q9Y485 3027 aa1.84□□□□□ -2.12
RNF38-201ENST00000259605 LAMA5O15230 3695 aa1.83□□□□□ -2.12
RNF38-201ENST00000259605 INE1O15225 51 aa1.81□□□□□ -2.12
RNF38-201ENST00000259605 MGAQ8IWI9 3026 aa1.8□□□□□ -2.12
RNF38-201ENST00000259605 PKD1L1Q8TDX9 2849 aa1.79□□□□□ -2.12
RNF38-201ENST00000259605 DNHD1Q96M86 4753 aa1.79□□□□□ -2.12
RNF38-201ENST00000259605 VPS13AQ96RL7 3174 aa1.79□□□□□ -2.12
RNF38-201ENST00000259605 FRYLO94915 3013 aa1.78□□□□□ -2.12
RNF38-201ENST00000259605 NBEAQ8NFP9 2946 aa1.78□□□□□ -2.12
RNF38-201ENST00000259605 CELSR2Q9HCU4 2923 aa1.78□□□□□ -2.12
RNF38-201ENST00000259605 C5orf42Q9H799 3197 aa1.77□□□□□ -2.13
RNF38-201ENST00000259605 BSNQ9UPA5 3926 aa1.77□□□□□ -2.13
RNF38-201ENST00000259605 DMXL2Q8TDJ6 3036 aa1.77□□□□□ -2.13
RNF38-201ENST00000259605 KRTAP12-1P59990 96 aa1.77□□□□□ -2.13
RNF38-201ENST00000259605 KRTAP12-3P60328 96 aa1.77□□□□□ -2.13
RNF38-201ENST00000259605 CSMD2Q7Z408 3487 aa1.77□□□□□ -2.13
RNF38-201ENST00000259605 SPRR2FQ96RM1 72 aa1.77□□□□□ -2.13
RNF38-201ENST00000259605 MXRA5Q9NR99 2828 aa1.76□□□□□ -2.13
RNF38-201ENST00000259605 TACC2O95359 2948 aa1.76□□□□□ -2.13
RNF38-201ENST00000259605 DCHS1Q96JQ0 3298 aa1.76□□□□□ -2.13
RNF38-201ENST00000259605 KRTAP5-9P26371 169 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms