RNA–Protein interactions for RNA: ENST00000256552.10

TRPM1-201, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPM1, Length 5,514 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-201ENST00000256552 KRTAP10-1P60331 282 aa5.64□□□□□ -1.51
TRPM1-201ENST00000256552 DMXL2Q8TDJ6 3036 aa5.64□□□□□ -1.51
TRPM1-201ENST00000256552 STAB1Q9NY15 2570 aa5.63□□□□□ -1.51
TRPM1-201ENST00000256552 APCP25054 2843 aa5.63□□□□□ -1.51
TRPM1-201ENST00000256552 KRTAP13-2Q52LG2 175 aa5.63□□□□□ -1.51
TRPM1-201ENST00000256552 ATMQ13315 3056 aa5.61□□□□□ -1.51
TRPM1-201ENST00000256552 USP34Q70CQ2 3546 aa5.6□□□□□ -1.51
TRPM1-201ENST00000256552 STAB2Q8WWQ8 2551 aa5.6□□□□□ -1.51
TRPM1-201ENST00000256552 CFAP47Q6ZTR5 3102 aa5.6□□□□□ -1.51
TRPM1-201ENST00000256552 Q6ZRN7 208 aaPredicted RBP5.59□□□□□ -1.51
TRPM1-201ENST00000256552 FLNBO75369 2602 aaKnown RBP5.58□□□□□ -1.52
TRPM1-201ENST00000256552 TNRC18O15417 2968 aaPredicted RBP5.56□□□□□ -1.52
TRPM1-201ENST00000256552 UBR5O95071 2799 aaPredicted RBP5.56□□□□□ -1.52
TRPM1-201ENST00000256552 MYO15AQ9UKN7 3530 aa5.56□□□□□ -1.52
TRPM1-201ENST00000256552 UTP20O75691 2785 aaKnown RBP5.55□□□□□ -1.52
TRPM1-201ENST00000256552 SPTBN5Q9NRC6 3674 aaKnown RBP5.54□□□□□ -1.52
TRPM1-201ENST00000256552 EYSQ5T1H1 3165 aa5.54□□□□□ -1.52
TRPM1-201ENST00000256552 TEP1Q99973 2627 aaKnown RBP5.54□□□□□ -1.52
TRPM1-201ENST00000256552 KRTAP13-3Q3SY46 172 aa5.54□□□□□ -1.52
TRPM1-201ENST00000256552 Q5VSD8 79 aa5.52□□□□□ -1.53
TRPM1-201ENST00000256552 DMXL1Q9Y485 3027 aa5.51□□□□□ -1.53
TRPM1-201ENST00000256552 KRTAP15-1Q3LI76 137 aa5.51□□□□□ -1.53
TRPM1-201ENST00000256552 NSD1Q96L73 2696 aaPredicted RBP5.5□□□□□ -1.53
TRPM1-201ENST00000256552 COL12A1Q99715 3063 aa5.5□□□□□ -1.53
TRPM1-201ENST00000256552 TPRXLQ17RH7 258 aa5.49□□□□□ -1.53
TRPM1-201ENST00000256552 HIVEP1P15822 2718 aa5.49□□□□□ -1.53
TRPM1-201ENST00000256552 MUC3AQ02505 3323 aa5.46□□□□□ -1.54
TRPM1-201ENST00000256552 HRNRQ86YZ3 2850 aaPredicted RBP5.45□□□□□ -1.54
TRPM1-201ENST00000256552 ZFHX3Q15911 3703 aa5.44□□□□□ -1.54
TRPM1-201ENST00000256552 WDFY3Q8IZQ1 3526 aa5.44□□□□□ -1.54
TRPM1-201ENST00000256552 DCHS1Q96JQ0 3298 aa5.43□□□□□ -1.54
TRPM1-201ENST00000256552 LOC400499M0QZD8 3231 aa5.42□□□□□ -1.54
TRPM1-201ENST00000256552 IGSF10Q6WRI0 2623 aa5.42□□□□□ -1.54
TRPM1-201ENST00000256552 CELSR2Q9HCU4 2923 aa5.4□□□□□ -1.54
TRPM1-201ENST00000256552 FLNCQ14315 2725 aa5.4□□□□□ -1.55
TRPM1-201ENST00000256552 KRTAP10-8P60410 259 aa5.4□□□□□ -1.55
TRPM1-201ENST00000256552 ZANQ9Y493 2812 aa5.39□□□□□ -1.55
TRPM1-201ENST00000256552 CSMD1Q96PZ7 3565 aa5.37□□□□□ -1.55
TRPM1-201ENST00000256552 ZFHX4Q86UP3 3567 aa5.36□□□□□ -1.55
TRPM1-201ENST00000256552 FBN2P35556 2912 aa5.35□□□□□ -1.55
TRPM1-201ENST00000256552 NIPBLQ6KC79 2804 aaeCLIP5.33□□□□□ -1.56
TRPM1-201ENST00000256552 ITPR2Q14571 2701 aa5.32□□□□□ -1.56
TRPM1-201ENST00000256552 KRTAP1-4P0C5Y4 121 aa5.32□□□□□ -1.56
TRPM1-201ENST00000256552 DCHS2Q6V1P9 2916 aa5.3□□□□□ -1.56
TRPM1-201ENST00000256552 TGP01266 2768 aa5.27□□□□□ -1.57
TRPM1-201ENST00000256552 KRTAP12-2P59991 146 aa5.24□□□□□ -1.57
TRPM1-201ENST00000256552 NF1P21359 2839 aa5.24□□□□□ -1.57
TRPM1-201ENST00000256552 SMG1Q96Q15 3661 aaKnown RBP5.23□□□□□ -1.57
TRPM1-201ENST00000256552 DMDP11532 3685 aa5.23□□□□□ -1.57
TRPM1-201ENST00000256552 INE1O15225 51 aa5.21□□□□□ -1.58
TRPM1-201ENST00000256552 PRO2289Q9P1D8 64 aa5.19□□□□□ -1.58
TRPM1-201ENST00000256552 KMT2BQ9UMN6 2715 aaPredicted RBP5.18□□□□□ -1.58
TRPM1-201ENST00000256552 ASPMQ8IZT6 3477 aa5.18□□□□□ -1.58
TRPM1-201ENST00000256552 MXRA5Q9NR99 2828 aa5.17□□□□□ -1.58
TRPM1-201ENST00000256552 RELNP78509 3460 aa5.17□□□□□ -1.58
TRPM1-201ENST00000256552 XP32Q5T750 250 aa5.16□□□□□ -1.58
TRPM1-201ENST00000256552 KRTAP3-1Q9BYR8 98 aa5.14□□□□□ -1.59
TRPM1-201ENST00000256552 CRYBG3Q68DQ2 2970 aa5.14□□□□□ -1.59
TRPM1-201ENST00000256552 KRTAP12-1P59990 96 aa5.12□□□□□ -1.59
TRPM1-201ENST00000256552 LAMA5O15230 3695 aa5.11□□□□□ -1.59
TRPM1-201ENST00000256552 SVEP1Q4LDE5 3571 aa5.11□□□□□ -1.59
TRPM1-201ENST00000256552 TENM3Q9P273 2699 aa5.1□□□□□ -1.59
TRPM1-201ENST00000256552 CELSR1Q9NYQ6 3014 aa5.09□□□□□ -1.59
TRPM1-201ENST00000256552 KRTAP13-4Q3LI77 160 aa5.09□□□□□ -1.59
TRPM1-201ENST00000256552 KRTAP10-6P60371 365 aaPredicted RBP5.03□□□□□ -1.6
TRPM1-201ENST00000256552 PDZD2O15018 2839 aa5.03□□□□□ -1.6
TRPM1-201ENST00000256552 SPENQ96T58 3664 aaKnown RBP5.02□□□□□ -1.61
TRPM1-201ENST00000256552 CUBNO60494 3623 aa4.99□□□□□ -1.61
TRPM1-201ENST00000256552 A0A1B0GVY2 172 aa4.96□□□□□ -1.62
TRPM1-201ENST00000256552 KRTAP10-10P60014 251 aa4.95□□□□□ -1.62
TRPM1-201ENST00000256552 TENM2Q9NT68 2774 aa4.91□□□□□ -1.62
TRPM1-201ENST00000256552 SRRM2Q9UQ35 2752 aaKnown RBP4.89□□□□□ -1.63
TRPM1-201ENST00000256552 TENM4Q6N022 2769 aa4.87□□□□□ -1.63
TRPM1-201ENST00000256552 PKD1L1Q8TDX9 2849 aa4.87□□□□□ -1.63
TRPM1-201ENST00000256552 KRTAP3-2Q9BYR7 98 aa4.86□□□□□ -1.63
TRPM1-201ENST00000256552 TENM1Q9UKZ4 2725 aa4.84□□□□□ -1.63
TRPM1-201ENST00000256552 VWFP04275 2813 aa4.84□□□□□ -1.63
TRPM1-201ENST00000256552 KRTAP3-3Q9BYR6 98 aa4.81□□□□□ -1.64
TRPM1-201ENST00000256552 ALMS1Q8TCU4 4167 aa4.81□□□□□ -1.64
TRPM1-201ENST00000256552 FBN3Q75N90 2809 aa4.74□□□□□ -1.65
TRPM1-201ENST00000256552 MEGF8Q7Z7M0 2845 aa4.71□□□□□ -1.66
TRPM1-201ENST00000256552 KRTAP23-1A1A580 65 aa4.7□□□□□ -1.66
TRPM1-201ENST00000256552 FBN1P35555 2871 aaKnown RBP4.7□□□□□ -1.66
TRPM1-201ENST00000256552 ANK3Q12955 4377 aaKnown RBP4.69□□□□□ -1.66
TRPM1-201ENST00000256552 NBPF19A0A087WUL8 3843 aa4.67□□□□□ -1.66
TRPM1-201ENST00000256552 VPS13CQ709C8 3753 aa4.65□□□□□ -1.66
TRPM1-201ENST00000256552 OTOGQ6ZRI0 2925 aa4.65□□□□□ -1.67
TRPM1-201ENST00000256552 BSNQ9UPA5 3926 aa4.64□□□□□ -1.67
TRPM1-201ENST00000256552 COL7A1Q02388 2944 aa4.64□□□□□ -1.67
TRPM1-201ENST00000256552 CSMD2Q7Z408 3487 aa4.63□□□□□ -1.67
TRPM1-201ENST00000256552 TRRAPQ9Y4A5 3859 aa4.62□□□□□ -1.67
TRPM1-201ENST00000256552 CSMD3Q7Z407 3707 aa4.52□□□□□ -1.69
TRPM1-201ENST00000256552 HUWE1Q7Z6Z7 4374 aaKnown RBP4.49□□□□□ -1.69
TRPM1-201ENST00000256552 KRTAP21-3Q3LHN1 58 aa4.48□□□□□ -1.69
TRPM1-201ENST00000256552 KRTAP10-12P60413 245 aa4.47□□□□□ -1.69
TRPM1-201ENST00000256552 AKAP9Q99996 3911 aa4.44□□□□□ -1.7
TRPM1-201ENST00000256552 LORP23490 312 aaPredicted RBP4.44□□□□□ -1.7
TRPM1-201ENST00000256552 KRTAP12-3P60328 96 aa4.41□□□□□ -1.7
TRPM1-201ENST00000256552 LCE3AQ5TA76 89 aa4.37□□□□□ -1.71
TRPM1-201ENST00000256552 KRTAP10-4P60372 401 aaPredicted RBP4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms