RNA–Protein interactions for RNA: ENST00000233072.9

CPS1-201, Transcript of carbamoyl-phosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPS1, Length 5,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-201ENST00000233072 PRRC2CQ9Y520 2896 aaKnown RBP3.3□□□□□ -1.88
CPS1-201ENST00000233072 SZT2Q5T011 3432 aa3.29□□□□□ -1.88
CPS1-201ENST00000233072 COL6A3P12111 3177 aa3.28□□□□□ -1.88
CPS1-201ENST00000233072 LAMA1P25391 3075 aa3.27□□□□□ -1.89
CPS1-201ENST00000233072 HUWE1Q7Z6Z7 4374 aaKnown RBP3.27□□□□□ -1.89
CPS1-201ENST00000233072 KRTAP10-12P60413 245 aa3.26□□□□□ -1.89
CPS1-201ENST00000233072 MGAQ8IWI9 3026 aa3.26□□□□□ -1.89
CPS1-201ENST00000233072 MT1HL1P0DM35 61 aa3.25□□□□□ -1.89
CPS1-201ENST00000233072 NBEAL2Q6ZNJ1 2754 aa3.25□□□□□ -1.89
CPS1-201ENST00000233072 LAMA3Q16787 3333 aa3.23□□□□□ -1.89
CPS1-201ENST00000233072 A0A0C4DFX4 3053 aa3.22□□□□□ -1.89
CPS1-201ENST00000233072 UNC80Q8N2C7 3258 aa3.22□□□□□ -1.89
CPS1-201ENST00000233072 KRTAP3-2Q9BYR7 98 aa3.21□□□□□ -1.9
CPS1-201ENST00000233072 EYSQ5T1H1 3165 aa3.21□□□□□ -1.9
CPS1-201ENST00000233072 UBR5O95071 2799 aaPredicted RBP3.21□□□□□ -1.9
CPS1-201ENST00000233072 NOTCH1P46531 2555 aa3.21□□□□□ -1.9
CPS1-201ENST00000233072 KRTAP3-3Q9BYR6 98 aa3.2□□□□□ -1.9
CPS1-201ENST00000233072 HIVEP1P15822 2718 aa3.19□□□□□ -1.9
CPS1-201ENST00000233072 APCP25054 2843 aa3.19□□□□□ -1.9
CPS1-201ENST00000233072 UTP20O75691 2785 aaKnown RBP3.18□□□□□ -1.9
CPS1-201ENST00000233072 KRTAP10-4P60372 401 aaPredicted RBP3.17□□□□□ -1.9
CPS1-201ENST00000233072 TRIOO75962 3097 aa3.17□□□□□ -1.9
CPS1-201ENST00000233072 ITPR1Q14643 2758 aa3.15□□□□□ -1.9
CPS1-201ENST00000233072 KRTAP12-3P60328 96 aa3.14□□□□□ -1.91
CPS1-201ENST00000233072 VCANP13611 3396 aa3.13□□□□□ -1.91
CPS1-201ENST00000233072 CDH23Q9H251 3354 aa3.13□□□□□ -1.91
CPS1-201ENST00000233072 ANK3Q12955 4377 aaKnown RBP3.13□□□□□ -1.91
CPS1-201ENST00000233072 DCHS1Q96JQ0 3298 aa3.1□□□□□ -1.91
CPS1-201ENST00000233072 LRBAP50851 2863 aa3.09□□□□□ -1.91
CPS1-201ENST00000233072 DSPP15924 2871 aaKnown RBP3.09□□□□□ -1.91
CPS1-201ENST00000233072 CFAP54Q96N23 3096 aa3.09□□□□□ -1.91
CPS1-201ENST00000233072 XIRP2A4UGR9 3374 aa3.08□□□□□ -1.92
CPS1-201ENST00000233072 NIPBLQ6KC79 2804 aaeCLIP3.08□□□□□ -1.92
CPS1-201ENST00000233072 LCE3AQ5TA76 89 aa3.08□□□□□ -1.92
CPS1-201ENST00000233072 TENM4Q6N022 2769 aa3.08□□□□□ -1.92
CPS1-201ENST00000233072 DNAH2Q9P225 4427 aa3.07□□□□□ -1.92
CPS1-201ENST00000233072 HRNRQ86YZ3 2850 aaPredicted RBP3.07□□□□□ -1.92
CPS1-201ENST00000233072 FRYLO94915 3013 aa3.06□□□□□ -1.92
CPS1-201ENST00000233072 USP34Q70CQ2 3546 aa3.05□□□□□ -1.92
CPS1-201ENST00000233072 FRYQ5TBA9 3013 aa3.04□□□□□ -1.92
CPS1-201ENST00000233072 CRCT1Q9UGL9 99 aa3.04□□□□□ -1.92
CPS1-201ENST00000233072 DMXL1Q9Y485 3027 aa3.04□□□□□ -1.92
CPS1-201ENST00000233072 ZZEF1O43149 2961 aa3.04□□□□□ -1.92
CPS1-201ENST00000233072 TGP01266 2768 aa3.03□□□□□ -1.93
CPS1-201ENST00000233072 WDFY4Q6ZS81 3184 aa3.03□□□□□ -1.93
CPS1-201ENST00000233072 DMDP11532 3685 aa3.01□□□□□ -1.93
CPS1-201ENST00000233072 VPS13AQ96RL7 3174 aa3.01□□□□□ -1.93
CPS1-201ENST00000233072 KRTAP4-5Q9BYR2 181 aa3□□□□□ -1.93
CPS1-201ENST00000233072 KRTAP8-1Q8IUC2 63 aa2.99□□□□□ -1.93
CPS1-201ENST00000233072 KALRNO60229 2985 aa2.99□□□□□ -1.93
CPS1-201ENST00000233072 TENM2Q9NT68 2774 aa2.99□□□□□ -1.93
CPS1-201ENST00000233072 FLNCQ14315 2725 aa2.98□□□□□ -1.93
CPS1-201ENST00000233072 DNAH14Q0VDD8 3507 aa2.98□□□□□ -1.93
CPS1-201ENST00000233072 MYO15AQ9UKN7 3530 aa2.96□□□□□ -1.94
CPS1-201ENST00000233072 CELSR3Q9NYQ7 3312 aa2.96□□□□□ -1.94
CPS1-201ENST00000233072 PDZD2O15018 2839 aa2.95□□□□□ -1.94
CPS1-201ENST00000233072 NBEAQ8NFP9 2946 aa2.95□□□□□ -1.94
CPS1-201ENST00000233072 KRTAP19-4Q3LI73 84 aa2.95□□□□□ -1.94
CPS1-201ENST00000233072 ATMQ13315 3056 aa2.94□□□□□ -1.94
CPS1-201ENST00000233072 SPEGQ15772 3267 aa2.94□□□□□ -1.94
CPS1-201ENST00000233072 LORP23490 312 aaPredicted RBP2.93□□□□□ -1.94
CPS1-201ENST00000233072 ZFHX4Q86UP3 3567 aa2.92□□□□□ -1.94
CPS1-201ENST00000233072 DNAH1Q9P2D7 4330 aa2.92□□□□□ -1.94
CPS1-201ENST00000233072 FREM2Q5SZK8 3169 aa2.91□□□□□ -1.94
CPS1-201ENST00000233072 KRTAP10-5P60370 271 aa2.91□□□□□ -1.94
CPS1-201ENST00000233072 WDFY3Q8IZQ1 3526 aa2.9□□□□□ -1.94
CPS1-201ENST00000233072 COL12A1Q99715 3063 aa2.9□□□□□ -1.95
CPS1-201ENST00000233072 MT1HP80294 61 aa2.89□□□□□ -1.95
CPS1-201ENST00000233072 SPRR2GQ9BYE4 73 aa2.89□□□□□ -1.95
CPS1-201ENST00000233072 ASH1LQ9NR48 2969 aaKnown RBP2.89□□□□□ -1.95
CPS1-201ENST00000233072 DNAH10Q8IVF4 4471 aa2.88□□□□□ -1.95
CPS1-201ENST00000233072 FBN2P35556 2912 aa2.88□□□□□ -1.95
CPS1-201ENST00000233072 CRYBG3Q68DQ2 2970 aa2.87□□□□□ -1.95
CPS1-201ENST00000233072 CFAP47Q6ZTR5 3102 aa2.86□□□□□ -1.95
CPS1-201ENST00000233072 TENM1Q9UKZ4 2725 aa2.86□□□□□ -1.95
CPS1-201ENST00000233072 DMXL2Q8TDJ6 3036 aa2.85□□□□□ -1.95
CPS1-201ENST00000233072 ADGRG4Q8IZF6 3080 aa2.85□□□□□ -1.95
CPS1-201ENST00000233072 DCHS2Q6V1P9 2916 aa2.84□□□□□ -1.95
CPS1-201ENST00000233072 TENM3Q9P273 2699 aa2.84□□□□□ -1.95
CPS1-201ENST00000233072 BOD1L1Q8NFC6 3051 aa2.84□□□□□ -1.96
CPS1-201ENST00000233072 TACC2O95359 2948 aa2.84□□□□□ -1.96
CPS1-201ENST00000233072 CELSR1Q9NYQ6 3014 aa2.83□□□□□ -1.96
CPS1-201ENST00000233072 MT2AP02795 61 aa2.83□□□□□ -1.96
CPS1-201ENST00000233072 LOC400499M0QZD8 3231 aa2.82□□□□□ -1.96
CPS1-201ENST00000233072 DYNC1H1Q14204 4646 aaKnown RBP2.82□□□□□ -1.96
CPS1-201ENST00000233072 DNAH6Q9C0G6 4158 aa2.82□□□□□ -1.96
CPS1-201ENST00000233072 DNAH9Q9NYC9 4486 aa2.82□□□□□ -1.96
CPS1-201ENST00000233072 CELSR2Q9HCU4 2923 aa2.81□□□□□ -1.96
CPS1-201ENST00000233072 ASPMQ8IZT6 3477 aa2.81□□□□□ -1.96
CPS1-201ENST00000233072 NF1P21359 2839 aa2.81□□□□□ -1.96
CPS1-201ENST00000233072 MXRA5Q9NR99 2828 aa2.8□□□□□ -1.96
CPS1-201ENST00000233072 KRTAP4-1Q9BYQ7 146 aa2.8□□□□□ -1.96
CPS1-201ENST00000233072 DNAH3Q8TD57 4116 aa2.8□□□□□ -1.96
CPS1-201ENST00000233072 DNAH11Q96DT5 4516 aa2.79□□□□□ -1.96
CPS1-201ENST00000233072 SMG1Q96Q15 3661 aaKnown RBP2.79□□□□□ -1.96
CPS1-201ENST00000233072 BSNQ9UPA5 3926 aa2.79□□□□□ -1.96
CPS1-201ENST00000233072 KRTAP10-7P60409 375 aaPredicted RBP2.79□□□□□ -1.96
CPS1-201ENST00000233072 DNAH17Q9UFH2 4485 aa2.78□□□□□ -1.96
CPS1-201ENST00000233072 ZANQ9Y493 2812 aa2.78□□□□□ -1.96
CPS1-201ENST00000233072 LCE3CQ5T5A8 94 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 199 ms