RNA–Protein interactions for RNA: ENST00000230859.7

PAPD7-201, Transcript of Non-canonical poly(A) RNA polymerase PAPD7, humanhuman

TSL 1 (best) BASIC

Gene PAPD7, Length 5,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD7-201ENST00000230859 LRBAP50851 2863 aa13.82□□□□□ -0.2
PAPD7-201ENST00000230859 BOD1L1Q8NFC6 3051 aa13.81□□□□□ -0.2
PAPD7-201ENST00000230859 KMT2BQ9UMN6 2715 aaPredicted RBP13.81□□□□□ -0.2
PAPD7-201ENST00000230859 COL6A3P12111 3177 aa13.79□□□□□ -0.2
PAPD7-201ENST00000230859 SPTBN5Q9NRC6 3674 aaKnown RBP13.72□□□□□ -0.21
PAPD7-201ENST00000230859 SPEGQ15772 3267 aa13.72□□□□□ -0.21
PAPD7-201ENST00000230859 REV3LO60673 3130 aa13.7□□□□□ -0.22
PAPD7-201ENST00000230859 ATMQ13315 3056 aa13.69□□□□□ -0.22
PAPD7-201ENST00000230859 TENM4Q6N022 2769 aa13.69□□□□□ -0.22
PAPD7-201ENST00000230859 HIVEP1P15822 2718 aa13.68□□□□□ -0.22
PAPD7-201ENST00000230859 TACC2O95359 2948 aa13.65□□□□□ -0.22
PAPD7-201ENST00000230859 ZZEF1O43149 2961 aa13.63□□□□□ -0.23
PAPD7-201ENST00000230859 PP632Q6XCG6 107 aa13.59□□□□□ -0.23
PAPD7-201ENST00000230859 NDUFAF8A1L188 74 aa13.59□□□□□ -0.23
PAPD7-201ENST00000230859 C10orf95Q9H7T3 257 aa13.55□□□□□ -0.24
PAPD7-201ENST00000230859 FLNCQ14315 2725 aa13.54□□□□□ -0.24
PAPD7-201ENST00000230859 XP32Q5T750 250 aa13.53□□□□□ -0.24
PAPD7-201ENST00000230859 UTP20O75691 2785 aaKnown RBP13.51□□□□□ -0.25
PAPD7-201ENST00000230859 APCP25054 2843 aa13.5□□□□□ -0.25
PAPD7-201ENST00000230859 KRTAP10-8P60410 259 aa13.5□□□□□ -0.25
PAPD7-201ENST00000230859 DMXL2Q8TDJ6 3036 aa13.49□□□□□ -0.25
PAPD7-201ENST00000230859 USP34Q70CQ2 3546 aa13.49□□□□□ -0.25
PAPD7-201ENST00000230859 KRTAP1-4P0C5Y4 121 aa13.48□□□□□ -0.25
PAPD7-201ENST00000230859 NIPBLQ6KC79 2804 aaeCLIP13.44□□□□□ -0.266e-6■■■□□ 17.7
PAPD7-201ENST00000230859 COL12A1Q99715 3063 aa13.43□□□□□ -0.26
PAPD7-201ENST00000230859 HRNRQ86YZ3 2850 aaPredicted RBP13.41□□□□□ -0.26
PAPD7-201ENST00000230859 TPRXLQ17RH7 258 aa13.39□□□□□ -0.27
PAPD7-201ENST00000230859 EYSQ5T1H1 3165 aa13.35□□□□□ -0.27
PAPD7-201ENST00000230859 A0A1B0GVY2 172 aa13.29□□□□□ -0.28
PAPD7-201ENST00000230859 LOC400499M0QZD8 3231 aa13.27□□□□□ -0.29
PAPD7-201ENST00000230859 MYO15AQ9UKN7 3530 aa13.26□□□□□ -0.29
PAPD7-201ENST00000230859 TNRC18O15417 2968 aaPredicted RBP13.25□□□□□ -0.29
PAPD7-201ENST00000230859 CFAP47Q6ZTR5 3102 aa13.25□□□□□ -0.29
PAPD7-201ENST00000230859 ASH1LQ9NR48 2969 aaKnown RBP13.23□□□□□ -0.29
PAPD7-201ENST00000230859 PRO2289Q9P1D8 64 aa13.21□□□□□ -0.29
PAPD7-201ENST00000230859 KRTAP10-10P60014 251 aa13.2□□□□□ -0.3
PAPD7-201ENST00000230859 ZANQ9Y493 2812 aa13.18□□□□□ -0.3
PAPD7-201ENST00000230859 TENM3Q9P273 2699 aa13.17□□□□□ -0.3
PAPD7-201ENST00000230859 DMXL1Q9Y485 3027 aa13.16□□□□□ -0.3
PAPD7-201ENST00000230859 CRYBG3Q68DQ2 2970 aa13.09□□□□□ -0.31
PAPD7-201ENST00000230859 H0YAA0 97 aa13.07□□□□□ -0.32
PAPD7-201ENST00000230859 CELSR2Q9HCU4 2923 aa13.07□□□□□ -0.32
PAPD7-201ENST00000230859 P0C880 135 aa13.06□□□□□ -0.32
PAPD7-201ENST00000230859 KRTAP13-3Q3SY46 172 aa13.05□□□□□ -0.32
PAPD7-201ENST00000230859 TENM1Q9UKZ4 2725 aa12.92□□□□□ -0.34
PAPD7-201ENST00000230859 DCHS2Q6V1P9 2916 aa12.91□□□□□ -0.34
PAPD7-201ENST00000230859 FBN2P35556 2912 aa12.88□□□□□ -0.35
PAPD7-201ENST00000230859 WDFY3Q8IZQ1 3526 aa12.83□□□□□ -0.36
PAPD7-201ENST00000230859 NF1P21359 2839 aa12.78□□□□□ -0.36
PAPD7-201ENST00000230859 MXRA5Q9NR99 2828 aa12.71□□□□□ -0.37
PAPD7-201ENST00000230859 TENM2Q9NT68 2774 aa12.66□□□□□ -0.38
PAPD7-201ENST00000230859 ZFHX4Q86UP3 3567 aa12.63□□□□□ -0.39
PAPD7-201ENST00000230859 DCHS1Q96JQ0 3298 aa12.61□□□□□ -0.39
PAPD7-201ENST00000230859 RELNP78509 3460 aa12.57□□□□□ -0.4
PAPD7-201ENST00000230859 TGP01266 2768 aa12.49□□□□□ -0.41
PAPD7-201ENST00000230859 CSMD1Q96PZ7 3565 aa12.44□□□□□ -0.42
PAPD7-201ENST00000230859 ASPMQ8IZT6 3477 aa12.41□□□□□ -0.42
PAPD7-201ENST00000230859 SMG1Q96Q15 3661 aaKnown RBP12.4□□□□□ -0.42
PAPD7-201ENST00000230859 LAMA5O15230 3695 aa12.36□□□□□ -0.43
PAPD7-201ENST00000230859 DMDP11532 3685 aa12.34□□□□□ -0.43
PAPD7-201ENST00000230859 KRTAP13-4Q3LI77 160 aa12.34□□□□□ -0.43
PAPD7-201ENST00000230859 PDZD2O15018 2839 aa12.32□□□□□ -0.44
PAPD7-201ENST00000230859 KRTAP12-2P59991 146 aa12.3□□□□□ -0.44
PAPD7-201ENST00000230859 CELSR1Q9NYQ6 3014 aa12.27□□□□□ -0.44
PAPD7-201ENST00000230859 PKD1L1Q8TDX9 2849 aa12.27□□□□□ -0.44
PAPD7-201ENST00000230859 KRTAP12-1P59990 96 aa12.15□□□□□ -0.46
PAPD7-201ENST00000230859 VWFP04275 2813 aa12.03□□□□□ -0.48
PAPD7-201ENST00000230859 MUC3AQ02505 3323 aa12.01□□□□□ -0.49
PAPD7-201ENST00000230859 SVEP1Q4LDE5 3571 aa11.97□□□□□ -0.49
PAPD7-201ENST00000230859 KRTAP3-1Q9BYR8 98 aa11.94□□□□□ -0.5
PAPD7-201ENST00000230859 KRTAP15-1Q3LI76 137 aa11.92□□□□□ -0.5
PAPD7-201ENST00000230859 SPENQ96T58 3664 aaKnown RBP11.74□□□□□ -0.53
PAPD7-201ENST00000230859 ANK3Q12955 4377 aaKnown RBP11.73□□□□□ -0.53
PAPD7-201ENST00000230859 SRRM2Q9UQ35 2752 aaKnown RBP11.72□□□□□ -0.53
PAPD7-201ENST00000230859 BSNQ9UPA5 3926 aa11.71□□□□□ -0.53
PAPD7-201ENST00000230859 KRTAP10-6P60371 365 aaPredicted RBP11.67□□□□□ -0.54
PAPD7-201ENST00000230859 OTOGQ6ZRI0 2925 aa11.59□□□□□ -0.55
PAPD7-201ENST00000230859 NBPF19A0A087WUL8 3843 aa11.59□□□□□ -0.55
PAPD7-201ENST00000230859 FBN3Q75N90 2809 aa11.56□□□□□ -0.56
PAPD7-201ENST00000230859 FBN1P35555 2871 aaKnown RBP11.52□□□□□ -0.56
PAPD7-201ENST00000230859 MT1HL1P0DM35 61 aa11.49□□□□□ -0.57
PAPD7-201ENST00000230859 CUBNO60494 3623 aa11.46□□□□□ -0.57
PAPD7-201ENST00000230859 KRTAP10-12P60413 245 aa11.37□□□□□ -0.59
PAPD7-201ENST00000230859 CSMD2Q7Z408 3487 aa11.31□□□□□ -0.6
PAPD7-201ENST00000230859 TRRAPQ9Y4A5 3859 aa11.27□□□□□ -0.61
PAPD7-201ENST00000230859 INE1O15225 51 aa11.27□□□□□ -0.61
PAPD7-201ENST00000230859 MEGF8Q7Z7M0 2845 aa11.23□□□□□ -0.61
PAPD7-201ENST00000230859 KRTAP3-2Q9BYR7 98 aa11.19□□□□□ -0.62
PAPD7-201ENST00000230859 ZFHX3Q15911 3703 aa11.19□□□□□ -0.62
PAPD7-201ENST00000230859 VPS13CQ709C8 3753 aa11.17□□□□□ -0.62
PAPD7-201ENST00000230859 KRTAP3-3Q9BYR6 98 aa11.15□□□□□ -0.63
PAPD7-201ENST00000230859 CRCT1Q9UGL9 99 aa11.14□□□□□ -0.63
PAPD7-201ENST00000230859 COL7A1Q02388 2944 aa11.12□□□□□ -0.63
PAPD7-201ENST00000230859 KRTAP12-3P60328 96 aa11.04□□□□□ -0.64
PAPD7-201ENST00000230859 HUWE1Q7Z6Z7 4374 aaKnown RBP11.03□□□□□ -0.64
PAPD7-201ENST00000230859 KRTAP10-4P60372 401 aaPredicted RBP11□□□□□ -0.65
PAPD7-201ENST00000230859 KRTAP23-1A1A580 65 aa10.98□□□□□ -0.65
PAPD7-201ENST00000230859 KRTAP4-5Q9BYR2 181 aa10.93□□□□□ -0.66
PAPD7-201ENST00000230859 AKAP9Q99996 3911 aa10.84□□□□□ -0.67
PAPD7-201ENST00000230859 LCE3AQ5TA76 89 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms