RNA–Protein interactions for RNA: ENST00000229022.7

VDR-201, Transcript of vitamin D receptor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene VDR, Length 4,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-201ENST00000229022 LAMA1P25391 3075 aa7.32□□□□□ -1.24
VDR-201ENST00000229022 CELSR2Q9HCU4 2923 aa7.32□□□□□ -1.24
VDR-201ENST00000229022 KRTAP21-3Q3LHN1 58 aa7.32□□□□□ -1.24
VDR-201ENST00000229022 CELSR3Q9NYQ7 3312 aa7.3□□□□□ -1.24
VDR-201ENST00000229022 REV3LO60673 3130 aa7.29□□□□□ -1.24
VDR-201ENST00000229022 BOD1L1Q8NFC6 3051 aa7.28□□□□□ -1.24
VDR-201ENST00000229022 A6NN06 94 aa7.28□□□□□ -1.24
VDR-201ENST00000229022 ZANQ9Y493 2812 aa7.26□□□□□ -1.25
VDR-201ENST00000229022 PLAC4Q8WY50 150 aa7.25□□□□□ -1.25
VDR-201ENST00000229022 H3BS24 57 aa7.25□□□□□ -1.25
VDR-201ENST00000229022 DCHS2Q6V1P9 2916 aa7.23□□□□□ -1.25
VDR-201ENST00000229022 A8MUU9 505 aa7.22□□□□□ -1.25
VDR-201ENST00000229022 VCANP13611 3396 aa7.22□□□□□ -1.25
VDR-201ENST00000229022 C20orf166-AS1Q96NR2 134 aa7.2□□□□□ -1.26
VDR-201ENST00000229022 SZT2Q5T011 3432 aa7.19□□□□□ -1.26
VDR-201ENST00000229022 KRTAP25-1Q3LHN0 102 aa7.18□□□□□ -1.26
VDR-201ENST00000229022 A8MU10 97 aa7.16□□□□□ -1.26
VDR-201ENST00000229022 TNRC18O15417 2968 aaPredicted RBP7.16□□□□□ -1.26
VDR-201ENST00000229022 EYSQ5T1H1 3165 aa7.14□□□□□ -1.27
VDR-201ENST00000229022 TENM3Q9P273 2699 aa7.1□□□□□ -1.27
VDR-201ENST00000229022 SPTBN5Q9NRC6 3674 aaKnown RBP7.1□□□□□ -1.27
VDR-201ENST00000229022 CRYBG3Q68DQ2 2970 aa7.09□□□□□ -1.27
VDR-201ENST00000229022 KRTAP1-4P0C5Y4 121 aa7.08□□□□□ -1.28
VDR-201ENST00000229022 NF1P21359 2839 aa7.08□□□□□ -1.28
VDR-201ENST00000229022 HRNRQ86YZ3 2850 aaPredicted RBP7.07□□□□□ -1.28
VDR-201ENST00000229022 COL6A3P12111 3177 aa7.06□□□□□ -1.28
VDR-201ENST00000229022 CFAP47Q6ZTR5 3102 aa7.02□□□□□ -1.29
VDR-201ENST00000229022 FBN2P35556 2912 aa7.02□□□□□ -1.29
VDR-201ENST00000229022 SPEGQ15772 3267 aa6.99□□□□□ -1.29
VDR-201ENST00000229022 USP34Q70CQ2 3546 aa6.98□□□□□ -1.29
VDR-201ENST00000229022 TENM1Q9UKZ4 2725 aa6.98□□□□□ -1.29
VDR-201ENST00000229022 TNP1P09430 55 aa6.96□□□□□ -1.3
VDR-201ENST00000229022 XP32Q5T750 250 aa6.95□□□□□ -1.3
VDR-201ENST00000229022 DMXL1Q9Y485 3027 aa6.94□□□□□ -1.3
VDR-201ENST00000229022 KRTAP16-1A8MUX0 517 aa6.92□□□□□ -1.3
VDR-201ENST00000229022 MXRA5Q9NR99 2828 aa6.88□□□□□ -1.31
VDR-201ENST00000229022 TPRXLQ17RH7 258 aa6.88□□□□□ -1.31
VDR-201ENST00000229022 PP632Q6XCG6 107 aa6.88□□□□□ -1.31
VDR-201ENST00000229022 MYO15AQ9UKN7 3530 aa6.86□□□□□ -1.31
VDR-201ENST00000229022 NDUFAF8A1L188 74 aa6.83□□□□□ -1.32
VDR-201ENST00000229022 CELSR1Q9NYQ6 3014 aa6.81□□□□□ -1.32
VDR-201ENST00000229022 H0YAA0 97 aa6.81□□□□□ -1.32
VDR-201ENST00000229022 WDFY3Q8IZQ1 3526 aa6.81□□□□□ -1.32
VDR-201ENST00000229022 TENM2Q9NT68 2774 aa6.79□□□□□ -1.32
VDR-201ENST00000229022 LOC400499M0QZD8 3231 aa6.78□□□□□ -1.32
VDR-201ENST00000229022 TGP01266 2768 aa6.77□□□□□ -1.33
VDR-201ENST00000229022 KRTAP13-3Q3SY46 172 aa6.76□□□□□ -1.33
VDR-201ENST00000229022 PKD1L1Q8TDX9 2849 aa6.7□□□□□ -1.34
VDR-201ENST00000229022 KRTAP10-8P60410 259 aa6.68□□□□□ -1.34
VDR-201ENST00000229022 C10orf95Q9H7T3 257 aa6.68□□□□□ -1.34
VDR-201ENST00000229022 PDZD2O15018 2839 aa6.66□□□□□ -1.34
VDR-201ENST00000229022 P0C880 135 aa6.66□□□□□ -1.34
VDR-201ENST00000229022 A0A1B0GVY2 172 aa6.62□□□□□ -1.35
VDR-201ENST00000229022 VWFP04275 2813 aa6.56□□□□□ -1.36
VDR-201ENST00000229022 KRTAP10-10P60014 251 aa6.54□□□□□ -1.36
VDR-201ENST00000229022 DCHS1Q96JQ0 3298 aa6.53□□□□□ -1.36
VDR-201ENST00000229022 PRO2289Q9P1D8 64 aa6.53□□□□□ -1.36
VDR-201ENST00000229022 ZFHX4Q86UP3 3567 aa6.52□□□□□ -1.37
VDR-201ENST00000229022 SMG1Q96Q15 3661 aaKnown RBP6.51□□□□□ -1.37
VDR-201ENST00000229022 DMDP11532 3685 aa6.47□□□□□ -1.37
VDR-201ENST00000229022 FBN1P35555 2871 aaKnown RBP6.46□□□□□ -1.38
VDR-201ENST00000229022 CSMD1Q96PZ7 3565 aa6.42□□□□□ -1.38
VDR-201ENST00000229022 RELNP78509 3460 aa6.41□□□□□ -1.38
VDR-201ENST00000229022 OTOGQ6ZRI0 2925 aa6.4□□□□□ -1.38
VDR-201ENST00000229022 MUC3AQ02505 3323 aa6.39□□□□□ -1.39
VDR-201ENST00000229022 SRRM2Q9UQ35 2752 aaKnown RBP6.37□□□□□ -1.39
VDR-201ENST00000229022 KRTAP12-2P59991 146 aa6.35□□□□□ -1.39
VDR-201ENST00000229022 KRTAP3-1Q9BYR8 98 aa6.35□□□□□ -1.39
VDR-201ENST00000229022 BSNQ9UPA5 3926 aa6.35□□□□□ -1.39
VDR-201ENST00000229022 KRTAP13-4Q3LI77 160 aa6.33□□□□□ -1.4
VDR-201ENST00000229022 KRTAP12-1P59990 96 aa6.32□□□□□ -1.4
VDR-201ENST00000229022 SPENQ96T58 3664 aaKnown RBP6.32□□□□□ -1.4
VDR-201ENST00000229022 ASPMQ8IZT6 3477 aa6.32□□□□□ -1.4
VDR-201ENST00000229022 FBN3Q75N90 2809 aa6.31□□□□□ -1.4
VDR-201ENST00000229022 LAMA5O15230 3695 aa6.26□□□□□ -1.41
VDR-201ENST00000229022 MEGF8Q7Z7M0 2845 aa6.21□□□□□ -1.42
VDR-201ENST00000229022 KRTAP10-6P60371 365 aaPredicted RBP6.19□□□□□ -1.42
VDR-201ENST00000229022 SVEP1Q4LDE5 3571 aa6.16□□□□□ -1.42
VDR-201ENST00000229022 COL7A1Q02388 2944 aa6.14□□□□□ -1.43
VDR-201ENST00000229022 MT1HL1P0DM35 61 aa6.08□□□□□ -1.44
VDR-201ENST00000229022 NBPF19A0A087WUL8 3843 aa6.06□□□□□ -1.44
VDR-201ENST00000229022 ZFHX3Q15911 3703 aa6.05□□□□□ -1.44
VDR-201ENST00000229022 ANK3Q12955 4377 aaKnown RBP5.98□□□□□ -1.45
VDR-201ENST00000229022 KRTAP3-2Q9BYR7 98 aa5.98□□□□□ -1.45
VDR-201ENST00000229022 KRTAP10-4P60372 401 aaPredicted RBP5.97□□□□□ -1.45
VDR-201ENST00000229022 KRTAP3-3Q9BYR6 98 aa5.97□□□□□ -1.45
VDR-201ENST00000229022 KRTAP15-1Q3LI76 137 aa5.93□□□□□ -1.46
VDR-201ENST00000229022 AKAP9Q99996 3911 aa5.89□□□□□ -1.47
VDR-201ENST00000229022 TRRAPQ9Y4A5 3859 aa5.85□□□□□ -1.47
VDR-201ENST00000229022 VPS13CQ709C8 3753 aa5.84□□□□□ -1.47
VDR-201ENST00000229022 CSMD2Q7Z408 3487 aa5.81□□□□□ -1.48
VDR-201ENST00000229022 KRTAP23-1A1A580 65 aa5.77□□□□□ -1.49
VDR-201ENST00000229022 KRTAP10-12P60413 245 aa5.74□□□□□ -1.49
VDR-201ENST00000229022 INE1O15225 51 aa5.7□□□□□ -1.5
VDR-201ENST00000229022 KRTAP4-5Q9BYR2 181 aa5.7□□□□□ -1.5
VDR-201ENST00000229022 CUBNO60494 3623 aa5.7□□□□□ -1.5
VDR-201ENST00000229022 HUWE1Q7Z6Z7 4374 aaKnown RBP5.62□□□□□ -1.51
VDR-201ENST00000229022 KRTAP12-3P60328 96 aa5.61□□□□□ -1.51
VDR-201ENST00000229022 ALMS1Q8TCU4 4167 aa5.61□□□□□ -1.51
VDR-201ENST00000229022 ZNF469Q96JG9 3925 aaPredicted RBP5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms