RNA–Protein interactions for RNA: ENST00000222399.10

LAMB1-201, Transcript of laminin subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAMB1, Length 5,725 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-201ENST00000222399 KALRNO60229 2985 aa7.21□□□□□ -1.25
LAMB1-201ENST00000222399 APCP25054 2843 aa7.19□□□□□ -1.26
LAMB1-201ENST00000222399 TPRXLQ17RH7 258 aa7.19□□□□□ -1.26
LAMB1-201ENST00000222399 ATMQ13315 3056 aa7.19□□□□□ -1.26
LAMB1-201ENST00000222399 LAMA1P25391 3075 aa7.17□□□□□ -1.26
LAMB1-201ENST00000222399 PP632Q6XCG6 107 aa7.17□□□□□ -1.26
LAMB1-201ENST00000222399 NDUFAF8A1L188 74 aa7.16□□□□□ -1.26
LAMB1-201ENST00000222399 TACC2O95359 2948 aa7.15□□□□□ -1.26
LAMB1-201ENST00000222399 C10orf95Q9H7T3 257 aa7.14□□□□□ -1.27
LAMB1-201ENST00000222399 LRBAP50851 2863 aa7.14□□□□□ -1.27
LAMB1-201ENST00000222399 COL12A1Q99715 3063 aa7.12□□□□□ -1.27
LAMB1-201ENST00000222399 SPTBN5Q9NRC6 3674 aaKnown RBP7.11□□□□□ -1.27
LAMB1-201ENST00000222399 KRTAP10-8P60410 259 aa7.1□□□□□ -1.27
LAMB1-201ENST00000222399 A0A1B0GVY2 172 aa7.1□□□□□ -1.27
LAMB1-201ENST00000222399 COL6A3P12111 3177 aa7.09□□□□□ -1.27
LAMB1-201ENST00000222399 NIPBLQ6KC79 2804 aaeCLIP7.08□□□□□ -1.28
LAMB1-201ENST00000222399 H0YAA0 97 aa7.07□□□□□ -1.28
LAMB1-201ENST00000222399 TENM4Q6N022 2769 aa7.06□□□□□ -1.28
LAMB1-201ENST00000222399 KRTAP13-3Q3SY46 172 aa7.06□□□□□ -1.28
LAMB1-201ENST00000222399 FRYLO94915 3013 aa7.05□□□□□ -1.28
LAMB1-201ENST00000222399 ADGRG4Q8IZF6 3080 aa7.05□□□□□ -1.28
LAMB1-201ENST00000222399 FREM2Q5SZK8 3169 aa7.04□□□□□ -1.28
LAMB1-201ENST00000222399 DMXL2Q8TDJ6 3036 aa7.01□□□□□ -1.29
LAMB1-201ENST00000222399 EYSQ5T1H1 3165 aa7.01□□□□□ -1.29
LAMB1-201ENST00000222399 NBEAQ8NFP9 2946 aa7.01□□□□□ -1.29
LAMB1-201ENST00000222399 BOD1L1Q8NFC6 3051 aa6.99□□□□□ -1.29
LAMB1-201ENST00000222399 ASH1LQ9NR48 2969 aaKnown RBP6.98□□□□□ -1.29
LAMB1-201ENST00000222399 KRTAP10-10P60014 251 aa6.98□□□□□ -1.29
LAMB1-201ENST00000222399 CRYBG3Q68DQ2 2970 aa6.97□□□□□ -1.29
LAMB1-201ENST00000222399 SPEGQ15772 3267 aa6.94□□□□□ -1.3
LAMB1-201ENST00000222399 PRO2289Q9P1D8 64 aa6.93□□□□□ -1.3
LAMB1-201ENST00000222399 CELSR2Q9HCU4 2923 aa6.93□□□□□ -1.3
LAMB1-201ENST00000222399 ZZEF1O43149 2961 aa6.93□□□□□ -1.3
LAMB1-201ENST00000222399 P0C880 135 aa6.93□□□□□ -1.3
LAMB1-201ENST00000222399 REV3LO60673 3130 aa6.92□□□□□ -1.3
LAMB1-201ENST00000222399 TNRC18O15417 2968 aaPredicted RBP6.89□□□□□ -1.31
LAMB1-201ENST00000222399 DCHS2Q6V1P9 2916 aa6.88□□□□□ -1.31
LAMB1-201ENST00000222399 USP34Q70CQ2 3546 aa6.87□□□□□ -1.31
LAMB1-201ENST00000222399 HRNRQ86YZ3 2850 aaPredicted RBP6.87□□□□□ -1.31
LAMB1-201ENST00000222399 CFAP47Q6ZTR5 3102 aa6.84□□□□□ -1.31
LAMB1-201ENST00000222399 ZANQ9Y493 2812 aa6.82□□□□□ -1.32
LAMB1-201ENST00000222399 MYO15AQ9UKN7 3530 aa6.8□□□□□ -1.32
LAMB1-201ENST00000222399 DMXL1Q9Y485 3027 aa6.74□□□□□ -1.33
LAMB1-201ENST00000222399 NF1P21359 2839 aa6.71□□□□□ -1.34
LAMB1-201ENST00000222399 TENM2Q9NT68 2774 aa6.7□□□□□ -1.34
LAMB1-201ENST00000222399 TENM1Q9UKZ4 2725 aa6.7□□□□□ -1.34
LAMB1-201ENST00000222399 KRTAP12-2P59991 146 aa6.66□□□□□ -1.34
LAMB1-201ENST00000222399 FBN2P35556 2912 aa6.66□□□□□ -1.34
LAMB1-201ENST00000222399 LOC400499M0QZD8 3231 aa6.66□□□□□ -1.34
LAMB1-201ENST00000222399 TENM3Q9P273 2699 aa6.62□□□□□ -1.35
LAMB1-201ENST00000222399 TGP01266 2768 aa6.61□□□□□ -1.35
LAMB1-201ENST00000222399 KRTAP13-4Q3LI77 160 aa6.6□□□□□ -1.35
LAMB1-201ENST00000222399 CELSR1Q9NYQ6 3014 aa6.59□□□□□ -1.35
LAMB1-201ENST00000222399 KRTAP12-1P59990 96 aa6.55□□□□□ -1.36
LAMB1-201ENST00000222399 KRTAP3-1Q9BYR8 98 aa6.54□□□□□ -1.36
LAMB1-201ENST00000222399 MXRA5Q9NR99 2828 aa6.54□□□□□ -1.36
LAMB1-201ENST00000222399 WDFY3Q8IZQ1 3526 aa6.54□□□□□ -1.36
LAMB1-201ENST00000222399 ASPMQ8IZT6 3477 aa6.5□□□□□ -1.37
LAMB1-201ENST00000222399 RELNP78509 3460 aa6.48□□□□□ -1.37
LAMB1-201ENST00000222399 PDZD2O15018 2839 aa6.44□□□□□ -1.38
LAMB1-201ENST00000222399 ZFHX4Q86UP3 3567 aa6.42□□□□□ -1.38
LAMB1-201ENST00000222399 LAMA5O15230 3695 aa6.4□□□□□ -1.39
LAMB1-201ENST00000222399 DMDP11532 3685 aa6.37□□□□□ -1.39
LAMB1-201ENST00000222399 KRTAP10-6P60371 365 aaPredicted RBP6.35□□□□□ -1.39
LAMB1-201ENST00000222399 PKD1L1Q8TDX9 2849 aa6.33□□□□□ -1.4
LAMB1-201ENST00000222399 DCHS1Q96JQ0 3298 aa6.32□□□□□ -1.4
LAMB1-201ENST00000222399 KRTAP15-1Q3LI76 137 aa6.31□□□□□ -1.4
LAMB1-201ENST00000222399 MT1HL1P0DM35 61 aa6.28□□□□□ -1.4
LAMB1-201ENST00000222399 VWFP04275 2813 aa6.26□□□□□ -1.41
LAMB1-201ENST00000222399 NBPF19A0A087WUL8 3843 aa6.25□□□□□ -1.41
LAMB1-201ENST00000222399 ANK3Q12955 4377 aaKnown RBP6.25□□□□□ -1.41
LAMB1-201ENST00000222399 CSMD1Q96PZ7 3565 aa6.24□□□□□ -1.41
LAMB1-201ENST00000222399 OTOGQ6ZRI0 2925 aa6.2□□□□□ -1.42
LAMB1-201ENST00000222399 SMG1Q96Q15 3661 aaKnown RBP6.19□□□□□ -1.42
LAMB1-201ENST00000222399 MUC3AQ02505 3323 aa6.16□□□□□ -1.42
LAMB1-201ENST00000222399 KRTAP3-3Q9BYR6 98 aa6.13□□□□□ -1.43
LAMB1-201ENST00000222399 KRTAP3-2Q9BYR7 98 aa6.13□□□□□ -1.43
LAMB1-201ENST00000222399 KRTAP10-4P60372 401 aaPredicted RBP6.12□□□□□ -1.43
LAMB1-201ENST00000222399 FBN1P35555 2871 aaKnown RBP6.07□□□□□ -1.44
LAMB1-201ENST00000222399 SVEP1Q4LDE5 3571 aa6.06□□□□□ -1.44
LAMB1-201ENST00000222399 KRTAP10-12P60413 245 aa6.06□□□□□ -1.44
LAMB1-201ENST00000222399 FBN3Q75N90 2809 aa6.04□□□□□ -1.44
LAMB1-201ENST00000222399 KRTAP4-5Q9BYR2 181 aa6.01□□□□□ -1.45
LAMB1-201ENST00000222399 SPENQ96T58 3664 aaKnown RBP5.98□□□□□ -1.45
LAMB1-201ENST00000222399 MEGF8Q7Z7M0 2845 aa5.98□□□□□ -1.45
LAMB1-201ENST00000222399 ZFHX3Q15911 3703 aa5.97□□□□□ -1.45
LAMB1-201ENST00000222399 HUWE1Q7Z6Z7 4374 aaKnown RBP5.96□□□□□ -1.46
LAMB1-201ENST00000222399 CSMD2Q7Z408 3487 aa5.94□□□□□ -1.46
LAMB1-201ENST00000222399 ALMS1Q8TCU4 4167 aa5.94□□□□□ -1.46
LAMB1-201ENST00000222399 INE1O15225 51 aa5.94□□□□□ -1.46
LAMB1-201ENST00000222399 KRTAP23-1A1A580 65 aa5.9□□□□□ -1.46
LAMB1-201ENST00000222399 BSNQ9UPA5 3926 aa5.89□□□□□ -1.47
LAMB1-201ENST00000222399 KRTAP12-3P60328 96 aa5.88□□□□□ -1.47
LAMB1-201ENST00000222399 CRCT1Q9UGL9 99 aa5.86□□□□□ -1.47
LAMB1-201ENST00000222399 CUBNO60494 3623 aa5.86□□□□□ -1.47
LAMB1-201ENST00000222399 SRRM2Q9UQ35 2752 aaKnown RBP5.85□□□□□ -1.47
LAMB1-201ENST00000222399 TRRAPQ9Y4A5 3859 aa5.83□□□□□ -1.48
LAMB1-201ENST00000222399 COL7A1Q02388 2944 aa5.8□□□□□ -1.48
LAMB1-201ENST00000222399 LCE3AQ5TA76 89 aa5.8□□□□□ -1.48
LAMB1-201ENST00000222399 LORP23490 312 aaPredicted RBP5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms