RNA–Protein interactions for RNA: ENSMUST00000194038.1

Pcdha8-201, Transcript of Protocadherin alpha 8, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha8, Length 5,338 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8-201ENSMUST00000194038 LitafQ9JLJ0 161 aa11.52□□□□□ -0.56
Pcdha8-201ENSMUST00000194038 Ighv1-69A0A0G2JFS5 117 aa11.52□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 Gm5129F6YHA9 99 aa11.52□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 Tctex1d4Q8CDY7 219 aa11.52□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 Gm4763Q8CFJ5 196 aa11.52□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 Cd99Q8VCN6 175 aa11.52□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 Lypd8Q9D7S0 255 aa11.52□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 Trav14-2A0A075B694 121 aa11.52□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 Gm10384Q3UQ87 92 aa11.52□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 Gm10604Q3V0X7 143 aa11.52□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 Ighv1-80A0A075B5Y3 117 aa11.52□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 Rnf138Q9CQE0 245 aaKnown RBP11.52□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 Trav4n-4A0A075B615 110 aa11.51□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 SbpP15501 199 aa11.51□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 Ndufa3Q9CQ91 84 aa11.51□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 Gtsf1Q9DAN6 167 aa11.51□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 Abca7Q91V24 2159 aa11.51□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 Malrd1A2AJX4 2123 aa11.51□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 Trav6n-6A0A075B6B2 114 aa11.51□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 Ighv1-9A0A0A6YW37 117 aa11.51□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 4930442H23RikQ9D5G7 103 aa11.51□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 Them7Q9DCP4 223 aa11.51□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 Gm17677B3GLJ5 116 aa11.51□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 Socs3O35718 225 aa11.51□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 Ighv1-62-3P01754 117 aa11.51□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 Vwc2lQ505H4 222 aa11.51□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 Thap8E9Q695 213 aa11.51□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 Ccl25O35903 144 aa11.51□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 Igll1P20764 209 aa11.51□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 Ndufa4Q62425 82 aaKnown RBP11.51□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 P01789 122 aa11.5□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 P01792 123 aa11.5□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 CrygbP04344 175 aa11.5□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 Gm12830F6XVH0 157 aa11.5□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 Gm19684G3UZ45 117 aa11.5□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 MsmbO08540 113 aa11.5□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 P01726 129 aa11.5□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 H1fxQ80ZM5 188 aa11.5□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 Phf3B2RQG2 2025 aaKnown RBP11.5□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 P01812 117 aa11.5□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 Cox6a1P43024 111 aa11.5□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 Il19Q8CJ70 176 aa11.5□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 Wdr81Q5ND34 1934 aa11.5□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 KprpB2RUR4 657 aa11.5□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 LeprotO89013 131 aa11.49□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 P04219 140 aa11.49□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 Tcf15Q60756 195 aa11.49□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 Parm1Q923D3 296 aa11.49□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 Ca1P13634 261 aa11.49□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 P01649 108 aa11.49□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 P01680 129 aa11.49□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 5730522E02RikQ5SP45 163 aa11.49□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 Msrb2Q78J03 175 aa11.49□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 Ighv1-19A0A0A6YWX0 117 aa11.49□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 Igkv4-53A0A0G2JFC6 119 aa11.49□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 Ighv3-8A0A075B5T0 131 aa11.48□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 Igkv20-101-2A0A0G2JDU3 113 aa11.48□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 Foxi1Q922I5 372 aa11.48□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 Fam216aQ9DB54 251 aa11.48□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 Atg2bQ80XK6 2075 aa11.48□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 Ighv1-16A0A075B5U1 98 aa11.48□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 P01725 110 aa11.48□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 Clec5aQ9R007 190 aa11.48□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 Dmrtc1c1Q9D410 238 aa11.48□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 Lamtor3O88653 124 aa11.48□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 Taf15Q8BQ46 557 aaKnown RBP11.48□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 Shisa9Q9CZN4 424 aa11.48□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 Stpg1Q9D2F5 341 aa11.48□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 Trav6-6A0A075B603 114 aa11.47□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 Myod1P10085 318 aa11.47□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 Csrp1P97315 193 aaKnown RBP11.47□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 Pygo2Q80V76 405 aa11.47□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 Oxld1Q9CR10 201 aa11.47□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 GlrxQ9QUH0 107 aa11.47□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 Znrd1Q791N7 123 aa11.47□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 Igkv4-62A0A0G2JDW9 117 aa11.47□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 Gm26558Q8BLW8 286 aa11.47□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 Exph5Q0VAV2 1960 aa11.47□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 Smim26Q3V460 107 aa11.46□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 Atp6v0e1Q9CQD8 81 aa11.46□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 Bcorl1A2AQH4 1781 aa11.46□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 Plxna3P70208 1872 aa11.46□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 A0A1L1SR50 188 aa11.46□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 Gm28038F7BCN9 126 aa11.46□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 1700084M14RikB1AT01 78 aa11.46□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 Cd59aO55186 123 aa11.46□□□□□ -0.57
Pcdha8-201ENSMUST00000194038 PtprdQ64487 1912 aa11.46□□□□□ -0.58
Pcdha8-201ENSMUST00000194038 Shank1D3YZU1 2167 aa11.46□□□□□ -0.58
Pcdha8-201ENSMUST00000194038 Dpm3Q9D1Q4 92 aa11.46□□□□□ -0.58
Pcdha8-201ENSMUST00000194038 Trav14d-1A0A075B6B1 121 aa11.45□□□□□ -0.58
Pcdha8-201ENSMUST00000194038 CtsgP28293 261 aa11.45□□□□□ -0.58
Pcdha8-201ENSMUST00000194038 Ly6g5bQ8K1T4 194 aa11.45□□□□□ -0.58
Pcdha8-201ENSMUST00000194038 Itgb4A2A863 1818 aa11.45□□□□□ -0.58
Pcdha8-201ENSMUST00000194038 Ighv1-23A0A0A6YVW3 117 aa11.45□□□□□ -0.58
Pcdha8-201ENSMUST00000194038 Defa27F2Z403 93 aa11.45□□□□□ -0.58
Pcdha8-201ENSMUST00000194038 Rasl10aQ8K5A4 203 aa11.45□□□□□ -0.58
Pcdha8-201ENSMUST00000194038 Prok2Q9QXU7 128 aa11.45□□□□□ -0.58
Pcdha8-201ENSMUST00000194038 Trbv30A0A0B4J1P1 111 aa11.45□□□□□ -0.58
Pcdha8-201ENSMUST00000194038 Colca2F8VPY8 239 aa11.45□□□□□ -0.58
Pcdha8-201ENSMUST00000194038 Foxl2O88470 375 aa11.45□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 60.8 ms