RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 RpeQ8VEE0 228 aa7.66□□□□□ -1.18
Ccdc40-202ENSMUST00000053440 Mrpl33Q9CQP0 65 aa7.66□□□□□ -1.18
Ccdc40-202ENSMUST00000053440 Tm4sf20Q9CQY8 226 aa7.66□□□□□ -1.18
Ccdc40-202ENSMUST00000053440 UrahQ9CRB3 118 aa7.66□□□□□ -1.18
Ccdc40-202ENSMUST00000053440 Sub1P11031 127 aaKnown RBP7.65□□□□□ -1.18
Ccdc40-202ENSMUST00000053440 Rchy1Q9CR50 261 aa7.65□□□□□ -1.18
Ccdc40-202ENSMUST00000053440 Ighv1-31A0A0A6YWK5 117 aa7.65□□□□□ -1.18
Ccdc40-202ENSMUST00000053440 Sertad4A7DTG3 377 aa7.65□□□□□ -1.18
Ccdc40-202ENSMUST00000053440 Ins1P01325 108 aa7.65□□□□□ -1.18
Ccdc40-202ENSMUST00000053440 TbpP29037 316 aa7.65□□□□□ -1.18
Ccdc40-202ENSMUST00000053440 Fam24aQ8CF27 98 aa7.65□□□□□ -1.18
Ccdc40-202ENSMUST00000053440 Vmn1r62Q8R2C0 300 aa7.65□□□□□ -1.18
Ccdc40-202ENSMUST00000053440 Cysrt1Q9D1E4 142 aa7.65□□□□□ -1.18
Ccdc40-202ENSMUST00000053440 Ttc32Q9DAC7 148 aa7.65□□□□□ -1.18
Ccdc40-202ENSMUST00000053440 Plekhb2Q9QZC7 221 aa7.65□□□□□ -1.18
Ccdc40-202ENSMUST00000053440 Sptbn4E9PX29 2561 aa7.65□□□□□ -1.18
Ccdc40-202ENSMUST00000053440 Ighv1-37A0A0A6YW32 117 aa7.65□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 Ighv8-8A0A0A6YXQ0 119 aa7.65□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 Olfr235E9Q9Z6 312 aa7.65□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 Mfge8P21956 463 aaKnown RBP7.65□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 Defb20Q30KP3 96 aa7.65□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 PdpnQ62011 172 aa7.65□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 Q9D131 166 aa7.65□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 Vmn1r63Q9EPT1 300 aa7.65□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 Arpc1aQ9R0Q6 370 aa7.65□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 Esp23A8R0V5 104 aa7.64□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 BC030500E9Q6W0 185 aa7.64□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 CrxO54751 299 aa7.64□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 P0C913 63 aa7.64□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 Cd5P13379 494 aa7.64□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 Ripply2Q2WG76 128 aa7.64□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 Gm5105Q8C6Y9 112 aa7.64□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 Trpt1Q8K3A2 249 aa7.64□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 Dkk2Q9QYZ8 259 aa7.64□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 Akap6E9Q9K8 2307 aa7.64□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 Obp2bA2BHR0 176 aa7.64□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 Svs5P30933 122 aa7.64□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 Olfr1431Q8VF59 312 aa7.64□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 Col6a4A2AX52 2309 aa7.64□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 Gm15293D3YX02 93 aa7.64□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 Omt2bD3YX29 119 aa7.64□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 Gm2174F6ZVF2 133 aa7.64□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 NpsP0C0P8 89 aa7.64□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 Defa13P50711 93 aa7.64□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 Tmem30bQ8BHG3 353 aa7.64□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 Tmem11Q8BK08 190 aa7.64□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 Stxbp6Q8R3T5 210 aa7.64□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 Fbxl15Q91W61 300 aa7.64□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 Plrg1Q922V4 513 aaKnown RBP7.64□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 Mrpl20Q9CQL4 149 aa7.64□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 Tomm6Q9CQN3 74 aa7.64□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 Rab1bQ9D1G1 201 aa7.64□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 Trav7-5A0A0G2JFX6 112 aa7.63□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 Gm45521A0A1B0GRK0 198 aa7.63□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 Tmem29A2ANF5 204 aa7.63□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 Gm16442D3YZG3 307 aa7.63□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 Tnfrsf9P20334 256 aa7.63□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 Gm4763Q8CFJ5 196 aa7.63□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 Cox8bP48772 70 aa7.63□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 Rbfox3Q8BIF2 374 aa7.63□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 D630044L22RikQ8C701 164 aa7.63□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 Smim13E9Q942 88 aa7.62□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 Q3UNZ8 350 aa7.62□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 QrfpQ8CE23 124 aa7.62□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 PpdpfQ9CR37 115 aa7.62□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 Rab9aQ9R0M6 201 aa7.62□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 Gm10036E9PYL9 178 aaKnown RBP7.62□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 Znf239P24399 201 aa7.62□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 Spata46Q4FZF2 204 aa7.62□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 Slc35d2Q762D5 326 aa7.62□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 Olfr810Q8VFH9 312 aa7.62□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 Olfr873Q8VFJ0 319 aa7.62□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 Rabac1Q9Z0S9 185 aa7.62□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 RbpjP31266 526 aa7.62□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 Pde6hP61249 83 aa7.62□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 Josd1Q9DBJ6 202 aa7.62□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 Cspg4Q8VHY0 2327 aa7.62□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 Thy1P01831 162 aa7.61□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 Gm6040Q4QY32 63 aa7.61□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 Snx22Q8C084 192 aa7.61□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 Ly6g5bQ8K1T4 194 aa7.61□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 Tspo2Q9CRZ8 162 aa7.61□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 Tex48Q9DA81 110 aa7.61□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 Spg11Q3UHA3 2430 aa7.61□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 Mrps21P58059 87 aa7.61□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 Prrx2Q06348 247 aa7.61□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 Ubald2Q8BQH4 164 aa7.61□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 Olfr365Q8VFT2 312 aa7.61□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 Dppa2Q9CWH0 301 aa7.61□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 Prr23a3Q9CWP9 254 aa7.61□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 GlrxQ9QUH0 107 aa7.61□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 Tmem141A2AJB2 108 aa7.61□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 Smad7O35253 426 aa7.61□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 P01748 117 aa7.61□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 Prima1Q810F0 153 aa7.61□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 Gnb1lQ9EQ15 326 aa7.61□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 Bhlha15Q9QYC3 197 aa7.61□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 Dopey2Q3UHQ6 2295 aa7.61□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 NbeaQ9EPN1 2936 aa7.61□□□□□ -1.19
Ccdc40-202ENSMUST00000053440 Prrc2aQ7TSC1 2158 aaKnown RBP7.6□□□□□ -1.19
Retrieved 100 of 22,080 RNA–protein pairs in 39.6 ms