RNA–Protein interactions for RNA: ENSMUST00000034131.9

Vps35-201, Transcript of Vacuolar protein sorting-associated protein 35, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vps35, Length 3,474 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35-201ENSMUST00000034131 Trav7-2Q5R1I3 112 aa10.6□□□□□ -0.71
Vps35-201ENSMUST00000034131 AamdcQ8R0P4 122 aa10.6□□□□□ -0.71
Vps35-201ENSMUST00000034131 Olfr877Q8VF62 311 aa10.6□□□□□ -0.71
Vps35-201ENSMUST00000034131 Pip4p2Q9CZX7 257 aa10.6□□□□□ -0.71
Vps35-201ENSMUST00000034131 OtorQ9JIE3 128 aa10.6□□□□□ -0.71
Vps35-201ENSMUST00000034131 Dmxl1Q6PNC0 3013 aa10.59□□□□□ -0.71
Vps35-201ENSMUST00000034131 TprF6ZDS4 2431 aaKnown RBP10.59□□□□□ -0.71
Vps35-201ENSMUST00000034131 Trdv1A0A075B657 112 aa10.59□□□□□ -0.71
Vps35-201ENSMUST00000034131 Vamp8O70404 101 aa10.59□□□□□ -0.71
Vps35-201ENSMUST00000034131 Spink13Q3UTS8 97 aa10.59□□□□□ -0.71
Vps35-201ENSMUST00000034131 Tctex1d4Q8CDY7 219 aa10.59□□□□□ -0.71
Vps35-201ENSMUST00000034131 PoleQ9WVF7 2283 aa10.59□□□□□ -0.71
Vps35-201ENSMUST00000034131 Igkv6-23A0A140T8N5 115 aa10.59□□□□□ -0.71
Vps35-201ENSMUST00000034131 Rasl10aQ8K5A4 203 aa10.59□□□□□ -0.71
Vps35-201ENSMUST00000034131 Olfr981Q8VEU2 310 aa10.59□□□□□ -0.71
Vps35-201ENSMUST00000034131 Flg2Q2VIS4 2362 aa10.59□□□□□ -0.71
Vps35-201ENSMUST00000034131 Trav5-1A0A075B5Z7 114 aa10.59□□□□□ -0.71
Vps35-201ENSMUST00000034131 Trav14-2A0A075B694 121 aa10.59□□□□□ -0.71
Vps35-201ENSMUST00000034131 CstadQ9D245 104 aa10.59□□□□□ -0.71
Vps35-201ENSMUST00000034131 Rev3lQ61493 3122 aa10.58□□□□□ -0.72
Vps35-201ENSMUST00000034131 Trav9d-1A0A075B699 112 aa10.58□□□□□ -0.72
Vps35-201ENSMUST00000034131 9830107B12RikD3Z5D6 160 aa10.58□□□□□ -0.72
Vps35-201ENSMUST00000034131 Ighv3-6P18531 116 aa10.58□□□□□ -0.72
Vps35-201ENSMUST00000034131 Cks1brtQ3UNC9 96 aa10.58□□□□□ -0.72
Vps35-201ENSMUST00000034131 Prss29Q99MS4 279 aa10.58□□□□□ -0.72
Vps35-201ENSMUST00000034131 Q9D131 166 aa10.58□□□□□ -0.72
Vps35-201ENSMUST00000034131 Defa-rs2P17534 91 aa10.58□□□□□ -0.72
Vps35-201ENSMUST00000034131 Prss28Q924N9 274 aa10.58□□□□□ -0.72
Vps35-201ENSMUST00000034131 Icam4Q9ERM2 262 aa10.58□□□□□ -0.72
Vps35-201ENSMUST00000034131 Rs1Q9Z1L4 224 aa10.58□□□□□ -0.72
Vps35-201ENSMUST00000034131 MgaA2AWL7 3003 aaKnown RBP10.58□□□□□ -0.72
Vps35-201ENSMUST00000034131 Map1bP14873 2464 aaKnown RBP10.58□□□□□ -0.72
Vps35-201ENSMUST00000034131 Gm15127B1AVZ5 449 aa10.57□□□□□ -0.72
Vps35-201ENSMUST00000034131 Gm15091B1AZM2 449 aa10.57□□□□□ -0.72
Vps35-201ENSMUST00000034131 P01794 123 aa10.57□□□□□ -0.72
Vps35-201ENSMUST00000034131 YrdcQ3U5F4 280 aa10.57□□□□□ -0.72
Vps35-201ENSMUST00000034131 Gm5464Q3UY29 175 aa10.57□□□□□ -0.72
Vps35-201ENSMUST00000034131 Trav8d-2Q5R1B6 112 aa10.57□□□□□ -0.72
Vps35-201ENSMUST00000034131 Fmc1Q9CR13 113 aa10.57□□□□□ -0.72
Vps35-201ENSMUST00000034131 TectaO08523 2155 aa10.57□□□□□ -0.72
Vps35-201ENSMUST00000034131 Gm29644A0A087WPG2 191 aa10.57□□□□□ -0.72
Vps35-201ENSMUST00000034131 Esp23A8R0V5 104 aa10.57□□□□□ -0.72
Vps35-201ENSMUST00000034131 Fam222aQ6PGH4 453 aa10.57□□□□□ -0.72
Vps35-201ENSMUST00000034131 Rln3Q8CHK2 141 aa10.57□□□□□ -0.72
Vps35-201ENSMUST00000034131 Fam110aQ8R184 296 aa10.57□□□□□ -0.72
Vps35-201ENSMUST00000034131 Pgpep1Q9ESW8 209 aa10.57□□□□□ -0.72
Vps35-201ENSMUST00000034131 Asxl3Q8C4A5 2259 aa10.57□□□□□ -0.72
Vps35-201ENSMUST00000034131 Samd10Q7TST3 202 aa10.57□□□□□ -0.72
Vps35-201ENSMUST00000034131 Spock3Q8BKV0 436 aa10.57□□□□□ -0.72
Vps35-201ENSMUST00000034131 Gm17324Q8C6J8 137 aa10.57□□□□□ -0.72
Vps35-201ENSMUST00000034131 Klk15Q8CGR4 254 aa10.57□□□□□ -0.72
Vps35-201ENSMUST00000034131 Fstl3Q9EQC7 256 aa10.57□□□□□ -0.72
Vps35-201ENSMUST00000034131 Zfp119aQ9JIC0 545 aa10.57□□□□□ -0.72
Vps35-201ENSMUST00000034131 TracA0A075B662 137 aa10.56□□□□□ -0.72
Vps35-201ENSMUST00000034131 TcraP01849 138 aa10.56□□□□□ -0.72
Vps35-201ENSMUST00000034131 Folr2Q05685 251 aa10.56□□□□□ -0.72
Vps35-201ENSMUST00000034131 Olfr1209Q3SXJ3 310 aa10.56□□□□□ -0.72
Vps35-201ENSMUST00000034131 Klhdc1Q80YG3 406 aa10.56□□□□□ -0.72
Vps35-201ENSMUST00000034131 Col27a1Q5QNQ9 1845 aa10.56□□□□□ -0.72
Vps35-201ENSMUST00000034131 PolP10400 120 aa10.56□□□□□ -0.72
Vps35-201ENSMUST00000034131 7420426K07RikQ3UX66 186 aa10.56□□□□□ -0.72
Vps35-201ENSMUST00000034131 Snrnp40Q6PE01 358 aa10.56□□□□□ -0.72
Vps35-201ENSMUST00000034131 Cdip1Q9DB75 208 aa10.56□□□□□ -0.72
Vps35-201ENSMUST00000034131 Abca7Q91V24 2159 aa10.56□□□□□ -0.72
Vps35-201ENSMUST00000034131 Ros1Q78DX7 2340 aa10.56□□□□□ -0.72
Vps35-201ENSMUST00000034131 Ighv8-12A0A0G2JDE1 119 aa10.56□□□□□ -0.72
Vps35-201ENSMUST00000034131 Igkv6-15A0A140T8M5 115 aa10.56□□□□□ -0.72
Vps35-201ENSMUST00000034131 ColqO35348 457 aa10.56□□□□□ -0.72
Vps35-201ENSMUST00000034131 Zfhx2Q2MHN3 2562 aa10.56□□□□□ -0.72
Vps35-201ENSMUST00000034131 Pcsk5Q04592 1877 aa10.55□□□□□ -0.72
Vps35-201ENSMUST00000034131 Ighv1-20A0A0A6YX66 117 aa10.55□□□□□ -0.72
Vps35-201ENSMUST00000034131 Cd24P24807 76 aa10.55□□□□□ -0.72
Vps35-201ENSMUST00000034131 Rbfox3Q8BIF2 374 aa10.55□□□□□ -0.72
Vps35-201ENSMUST00000034131 Gm45717A0A1B0GT68 152 aa10.55□□□□□ -0.72
Vps35-201ENSMUST00000034131 Ndufa1O35683 70 aa10.55□□□□□ -0.72
Vps35-201ENSMUST00000034131 P01756 117 aa10.55□□□□□ -0.72
Vps35-201ENSMUST00000034131 P01757 117 aa10.55□□□□□ -0.72
Vps35-201ENSMUST00000034131 Tcl1b4P56844 120 aa10.55□□□□□ -0.72
Vps35-201ENSMUST00000034131 Hist1h1tQ07133 208 aa10.55□□□□□ -0.72
Vps35-201ENSMUST00000034131 Rnase2aQ8K196 155 aa10.55□□□□□ -0.72
Vps35-201ENSMUST00000034131 Cacna1gQ5SUF7 2381 aa10.55□□□□□ -0.72
Vps35-201ENSMUST00000034131 Trav7-5A0A0G2JFX6 112 aa10.54□□□□□ -0.72
Vps35-201ENSMUST00000034131 KprpB2RUR4 657 aa10.54□□□□□ -0.72
Vps35-201ENSMUST00000034131 Esp3J3QN49 87 aa10.54□□□□□ -0.72
Vps35-201ENSMUST00000034131 Mex3bQ69Z36 601 aaKnown RBP10.54□□□□□ -0.72
Vps35-201ENSMUST00000034131 Spink2Q8BMY7 86 aa10.54□□□□□ -0.72
Vps35-201ENSMUST00000034131 Ins1P01325 108 aa10.54□□□□□ -0.72
Vps35-201ENSMUST00000034131 Dynlrb1P62627 96 aa10.54□□□□□ -0.72
Vps35-201ENSMUST00000034131 Cfc1P97766 202 aa10.54□□□□□ -0.72
Vps35-201ENSMUST00000034131 NpbQ8K4P1 119 aa10.54□□□□□ -0.72
Vps35-201ENSMUST00000034131 CadB2RQC6 2225 aa10.54□□□□□ -0.72
Vps35-201ENSMUST00000034131 Ighv1-37A0A0A6YW32 117 aa10.54□□□□□ -0.72
Vps35-201ENSMUST00000034131 Gm19345G3UYD9 124 aa10.54□□□□□ -0.72
Vps35-201ENSMUST00000034131 P04943 107 aa10.54□□□□□ -0.72
Vps35-201ENSMUST00000034131 Gm10277Q6R5C6 214 aa10.54□□□□□ -0.72
Vps35-201ENSMUST00000034131 Spta1P08032 2415 aa10.53□□□□□ -0.72
Vps35-201ENSMUST00000034131 Cd5P13379 494 aa10.53□□□□□ -0.72
Vps35-201ENSMUST00000034131 HilpdaQ9JLS0 64 aa10.53□□□□□ -0.72
Vps35-201ENSMUST00000034131 Ighv1-7A0A075B5T7 117 aa10.53□□□□□ -0.72
Vps35-201ENSMUST00000034131 A0A1L1SR50 188 aa10.53□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 70 ms