RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Ly6g5bQ8K1T4 194 aa14.55□□□□□ -0.08
Shkbp1-201ENSMUST00000003857 Cdpf1Q8R3A2 119 aa14.55□□□□□ -0.08
Shkbp1-201ENSMUST00000003857 Tmem160Q9D938 188 aa14.55□□□□□ -0.08
Shkbp1-201ENSMUST00000003857 Dnajb12Q9QYI4 376 aaKnown RBP14.55□□□□□ -0.08
Shkbp1-201ENSMUST00000003857 Gm6525A0A0A6YW33 106 aa14.55□□□□□ -0.08
Shkbp1-201ENSMUST00000003857 Trbv14A0A140T8L9 115 aa14.55□□□□□ -0.08
Shkbp1-201ENSMUST00000003857 Rps20P60867 119 aaKnown RBP14.55□□□□□ -0.08
Shkbp1-201ENSMUST00000003857 Tomm6Q9CQN3 74 aa14.55□□□□□ -0.08
Shkbp1-201ENSMUST00000003857 Tspo2Q9CRZ8 162 aa14.55□□□□□ -0.08
Shkbp1-201ENSMUST00000003857 Ube2l6Q9QZU9 153 aa14.55□□□□□ -0.08
Shkbp1-201ENSMUST00000003857 TroQ6DIC6 2087 aa14.55□□□□□ -0.08
Shkbp1-201ENSMUST00000003857 Trdv2-1A0A0G2JGB9 116 aa14.54□□□□□ -0.08
Shkbp1-201ENSMUST00000003857 Itgb1bp1O35671 200 aa14.54□□□□□ -0.08
Shkbp1-201ENSMUST00000003857 Zfand3Q497H0 227 aa14.54□□□□□ -0.08
Shkbp1-201ENSMUST00000003857 Trdv2-2Q5R1A4 116 aa14.54□□□□□ -0.08
Shkbp1-201ENSMUST00000003857 QrfpQ8CE23 124 aa14.54□□□□□ -0.08
Shkbp1-201ENSMUST00000003857 Mrpl20Q9CQL4 149 aa14.54□□□□□ -0.08
Shkbp1-201ENSMUST00000003857 RhogP84096 191 aa14.54□□□□□ -0.08
Shkbp1-201ENSMUST00000003857 Prok1Q14A28 105 aa14.54□□□□□ -0.08
Shkbp1-201ENSMUST00000003857 Defb20Q30KP3 96 aa14.54□□□□□ -0.08
Shkbp1-201ENSMUST00000003857 Gng7Q61016 68 aa14.54□□□□□ -0.08
Shkbp1-201ENSMUST00000003857 Msrb2Q78J03 175 aa14.54□□□□□ -0.08
Shkbp1-201ENSMUST00000003857 Aqp6Q8C4A0 293 aa14.54□□□□□ -0.08
Shkbp1-201ENSMUST00000003857 Fam24aQ8CF27 98 aa14.54□□□□□ -0.08
Shkbp1-201ENSMUST00000003857 Pgpep1lQ9CWB5 130 aa14.54□□□□□ -0.08
Shkbp1-201ENSMUST00000003857 Npc2Q9Z0J0 149 aa14.54□□□□□ -0.08
Shkbp1-201ENSMUST00000003857 Ccdc71lE9Q4T4 218 aa14.53□□□□□ -0.08
Shkbp1-201ENSMUST00000003857 Defa35E9QLQ1 93 aa14.53□□□□□ -0.08
Shkbp1-201ENSMUST00000003857 CrygbP04344 175 aa14.53□□□□□ -0.08
Shkbp1-201ENSMUST00000003857 CnfnQ6PCW6 111 aa14.53□□□□□ -0.08
Shkbp1-201ENSMUST00000003857 Vps25Q9CQ80 176 aa14.53□□□□□ -0.08
Shkbp1-201ENSMUST00000003857 Lama5Q61001 3718 aa14.53□□□□□ -0.08
Shkbp1-201ENSMUST00000003857 Nav2E9Q842 2432 aa14.53□□□□□ -0.08
Shkbp1-201ENSMUST00000003857 Ighv1-16A0A075B5U1 98 aa14.53□□□□□ -0.08
Shkbp1-201ENSMUST00000003857 AhspQ9CY02 102 aa14.53□□□□□ -0.08
Shkbp1-201ENSMUST00000003857 Rabac1Q9Z0S9 185 aa14.53□□□□□ -0.08
Shkbp1-201ENSMUST00000003857 Obox8V9GWY9 217 aa14.53□□□□□ -0.08
Shkbp1-201ENSMUST00000003857 Abca4O35600 2310 aa14.52□□□□□ -0.08
Shkbp1-201ENSMUST00000003857 Igkv4-90A0A075B5L3 117 aa14.52□□□□□ -0.08
Shkbp1-201ENSMUST00000003857 Ighv3-1A0A075B5S6 116 aa14.52□□□□□ -0.08
Shkbp1-201ENSMUST00000003857 Cd33Q63994 403 aa14.52□□□□□ -0.08
Shkbp1-201ENSMUST00000003857 Olfr365Q8VFT2 312 aa14.52□□□□□ -0.08
Shkbp1-201ENSMUST00000003857 Q9CX25 107 aa14.52□□□□□ -0.08
Shkbp1-201ENSMUST00000003857 Mfge8P21956 463 aaKnown RBP14.52□□□□□ -0.09
Shkbp1-201ENSMUST00000003857 Ccl6P27784 116 aa14.52□□□□□ -0.09
Shkbp1-201ENSMUST00000003857 Srsf2Q62093 221 aaKnown RBP14.52□□□□□ -0.09
Shkbp1-201ENSMUST00000003857 Minos1Q7TNS2 76 aa14.52□□□□□ -0.09
Shkbp1-201ENSMUST00000003857 Esp38A8R0X1 80 aa14.51□□□□□ -0.09
Shkbp1-201ENSMUST00000003857 Lynx1P0DP60 116 aa14.51□□□□□ -0.09
Shkbp1-201ENSMUST00000003857 Cacng7P62956 275 aa14.51□□□□□ -0.09
Shkbp1-201ENSMUST00000003857 Gm10118Q8C8J5 116 aa14.51□□□□□ -0.09
Shkbp1-201ENSMUST00000003857 Olfr1367Q8VFG2 316 aa14.51□□□□□ -0.09
Shkbp1-201ENSMUST00000003857 Rchy1Q9CR50 261 aa14.51□□□□□ -0.09
Shkbp1-201ENSMUST00000003857 Gtsf1lQ9CWD0 151 aa14.51□□□□□ -0.09
Shkbp1-201ENSMUST00000003857 Prrc2cQ3TLH4 2846 aaKnown RBP14.51□□□□□ -0.09
Shkbp1-201ENSMUST00000003857 Tmem141A2AJB2 108 aa14.51□□□□□ -0.09
Shkbp1-201ENSMUST00000003857 Omt2bD3YX29 119 aa14.51□□□□□ -0.09
Shkbp1-201ENSMUST00000003857 Ca1P13634 261 aa14.51□□□□□ -0.09
Shkbp1-201ENSMUST00000003857 Gm9970F6ZED4 185 aa14.5□□□□□ -0.09
Shkbp1-201ENSMUST00000003857 BtcQ05928 177 aa14.5□□□□□ -0.09
Shkbp1-201ENSMUST00000003857 PdpnQ62011 172 aa14.5□□□□□ -0.09
Shkbp1-201ENSMUST00000003857 Rnf185Q91YT2 192 aa14.5□□□□□ -0.09
Shkbp1-201ENSMUST00000003857 Tctex1d2Q9CQ66 144 aa14.5□□□□□ -0.09
Shkbp1-201ENSMUST00000003857 Tppp3Q9CRB6 176 aaKnown RBP14.5□□□□□ -0.09
Shkbp1-201ENSMUST00000003857 Tctex1d1Q9D5I4 173 aa14.5□□□□□ -0.09
Shkbp1-201ENSMUST00000003857 CtrlQ9ER05 264 aa14.5□□□□□ -0.09
Shkbp1-201ENSMUST00000003857 Gm16442D3YZG3 307 aa14.49□□□□□ -0.09
Shkbp1-201ENSMUST00000003857 CrxO54751 299 aa14.49□□□□□ -0.09
Shkbp1-201ENSMUST00000003857 P01756 117 aa14.49□□□□□ -0.09
Shkbp1-201ENSMUST00000003857 P01757 117 aa14.49□□□□□ -0.09
Shkbp1-201ENSMUST00000003857 Rbx1P62878 108 aa14.49□□□□□ -0.09
Shkbp1-201ENSMUST00000003857 AW146154Q3TPQ7 468 aa14.49□□□□□ -0.09
Shkbp1-201ENSMUST00000003857 7420426K07RikQ3UX66 186 aa14.49□□□□□ -0.09
Shkbp1-201ENSMUST00000003857 Atp6v0e1Q9CQD8 81 aa14.49□□□□□ -0.09
Shkbp1-201ENSMUST00000003857 Q9D131 166 aa14.49□□□□□ -0.09
Shkbp1-201ENSMUST00000003857 Rnf114Q9ET26 229 aa14.49□□□□□ -0.09
Shkbp1-201ENSMUST00000003857 Sec16aA2AIX1 2377 aa14.49□□□□□ -0.09
Shkbp1-201ENSMUST00000003857 Gm5941Q497P9 117 aa14.49□□□□□ -0.09
Shkbp1-201ENSMUST00000003857 Clec4b2Q67DU8 208 aa14.49□□□□□ -0.09
Shkbp1-201ENSMUST00000003857 Prima1Q810F0 153 aa14.49□□□□□ -0.09
Shkbp1-201ENSMUST00000003857 Znf787Q8BIF9 381 aa14.49□□□□□ -0.09
Shkbp1-201ENSMUST00000003857 Trpt1Q8K3A2 249 aa14.49□□□□□ -0.09
Shkbp1-201ENSMUST00000003857 ManfQ9CXI5 179 aaKnown RBP14.49□□□□□ -0.09
Shkbp1-201ENSMUST00000003857 Vmn1r63Q9EPT1 300 aa14.49□□□□□ -0.09
Shkbp1-201ENSMUST00000003857 SelenokQ9JLJ1 94 aa14.49□□□□□ -0.09
Shkbp1-201ENSMUST00000003857 Hcfc1Q61191 2045 aaKnown RBP14.49□□□□□ -0.09
Shkbp1-201ENSMUST00000003857 Ceacam15A0A0B4J1L0 234 aa14.48□□□□□ -0.09
Shkbp1-201ENSMUST00000003857 A0A1Y7VMQ4 148 aa14.48□□□□□ -0.09
Shkbp1-201ENSMUST00000003857 Gm15293D3YX02 93 aa14.48□□□□□ -0.09
Shkbp1-201ENSMUST00000003857 Prrx2Q06348 247 aa14.48□□□□□ -0.09
Shkbp1-201ENSMUST00000003857 Tcrg-V6A0A075B5Y8 134 aa14.48□□□□□ -0.09
Shkbp1-201ENSMUST00000003857 Defb30Q30KN4 75 aa14.48□□□□□ -0.09
Shkbp1-201ENSMUST00000003857 Crip3Q6Q6R3 243 aa14.48□□□□□ -0.09
Shkbp1-201ENSMUST00000003857 Olfr1437Q7TQR7 312 aa14.48□□□□□ -0.09
Shkbp1-201ENSMUST00000003857 NpbQ8K4P1 119 aa14.48□□□□□ -0.09
Shkbp1-201ENSMUST00000003857 Fmc1Q9CR13 113 aa14.48□□□□□ -0.09
Shkbp1-201ENSMUST00000003857 Bub3Q9WVA3 326 aa14.48□□□□□ -0.09
Shkbp1-201ENSMUST00000003857 Gm5105Q8C6Y9 112 aa14.47□□□□□ -0.09
Shkbp1-201ENSMUST00000003857 D630044L22RikQ8C701 164 aa14.47□□□□□ -0.09
Shkbp1-201ENSMUST00000003857 PdfS4R2K0 231 aa14.47□□□□□ -0.09
Retrieved 100 of 22,080 RNA–protein pairs in 31.4 ms