RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 ATP11AUNQ6ZP68 121 aa3.59□□□□□ -1.83
RTTN-209ENST00000583043 KMT2BQ9UMN6 2715 aaPredicted RBP3.59□□□□□ -1.83
RTTN-209ENST00000583043 PSPHP1O15172 72 aa3.59□□□□□ -1.84
RTTN-209ENST00000583043 Q5XG85 94 aa3.59□□□□□ -1.84
RTTN-209ENST00000583043 A0A1B0GU69 56 aa3.58□□□□□ -1.84
RTTN-209ENST00000583043 SPENQ96T58 3664 aaKnown RBP3.58□□□□□ -1.84
RTTN-209ENST00000583043 FREM2Q5SZK8 3169 aa3.58□□□□□ -1.84
RTTN-209ENST00000583043 KRTAP1-5Q9BYS1 174 aa3.58□□□□□ -1.84
RTTN-209ENST00000583043 KRTAP21-3Q3LHN1 58 aa3.58□□□□□ -1.84
RTTN-209ENST00000583043 LINC00304Q8N9R0 145 aa3.58□□□□□ -1.84
RTTN-209ENST00000583043 FRYQ5TBA9 3013 aa3.58□□□□□ -1.84
RTTN-209ENST00000583043 UBR5O95071 2799 aaPredicted RBP3.58□□□□□ -1.84
RTTN-209ENST00000583043 RPS29P62273 56 aaKnown RBP3.57□□□□□ -1.84
RTTN-209ENST00000583043 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.57□□□□□ -1.84
RTTN-209ENST00000583043 Q6ZRN7 208 aaPredicted RBP3.57□□□□□ -1.84
RTTN-209ENST00000583043 C7orf65Q6ZTY9 151 aa3.57□□□□□ -1.84
RTTN-209ENST00000583043 MUC3AQ02505 3323 aa3.57□□□□□ -1.84
RTTN-209ENST00000583043 KRTAP13-1Q8IUC0 172 aa3.56□□□□□ -1.84
RTTN-209ENST00000583043 CFAP46Q8IYW2 2715 aa3.56□□□□□ -1.84
RTTN-209ENST00000583043 ATRQ13535 2644 aa3.56□□□□□ -1.84
RTTN-209ENST00000583043 VPS13AQ96RL7 3174 aa3.56□□□□□ -1.84
RTTN-209ENST00000583043 LINC01558Q9Y6Z2 57 aa3.55□□□□□ -1.84
RTTN-209ENST00000583043 COL6A3P12111 3177 aa3.55□□□□□ -1.84
RTTN-209ENST00000583043 Q75L30 129 aa3.55□□□□□ -1.84
RTTN-209ENST00000583043 UQCR11O14957 56 aa3.54□□□□□ -1.84
RTTN-209ENST00000583043 CELSR3Q9NYQ7 3312 aa3.54□□□□□ -1.84
RTTN-209ENST00000583043 IGKV2D-30A0A075B6S6 120 aa3.54□□□□□ -1.84
RTTN-209ENST00000583043 IGKV2-30P06310 120 aa3.54□□□□□ -1.84
RTTN-209ENST00000583043 CDC42SE1Q9NRR8 79 aa3.54□□□□□ -1.84
RTTN-209ENST00000583043 KRTAP7-1Q8IUC3 87 aa3.53□□□□□ -1.84
RTTN-209ENST00000583043 SMR3BP02814 79 aaPredicted RBP3.53□□□□□ -1.85
RTTN-209ENST00000583043 Q96NJ1 140 aa3.53□□□□□ -1.85
RTTN-209ENST00000583043 CYSTM1Q9H1C7 97 aa3.52□□□□□ -1.85
RTTN-209ENST00000583043 FP248Q71RG6 208 aaPredicted RBP3.52□□□□□ -1.85
RTTN-209ENST00000583043 Q8N9P0 234 aaPredicted RBP3.51□□□□□ -1.85
RTTN-209ENST00000583043 FLNCQ14315 2725 aa3.51□□□□□ -1.85
RTTN-209ENST00000583043 DSPP15924 2871 aaKnown RBP3.51□□□□□ -1.85
RTTN-209ENST00000583043 A0A0G2JQZ4 141 aa3.5□□□□□ -1.85
RTTN-209ENST00000583043 SETXQ7Z333 2677 aaKnown RBP3.5□□□□□ -1.85
RTTN-209ENST00000583043 CAMK2N1Q7Z7J9 78 aa3.49□□□□□ -1.85
RTTN-209ENST00000583043 TEX15Q9BXT5 2789 aa3.49□□□□□ -1.85
RTTN-209ENST00000583043 WDFY4Q6ZS81 3184 aa3.49□□□□□ -1.85
RTTN-209ENST00000583043 CHD6Q8TD26 2715 aa3.49□□□□□ -1.85
RTTN-209ENST00000583043 TEP1Q99973 2627 aaKnown RBP3.48□□□□□ -1.85
RTTN-209ENST00000583043 DMAC1Q96GE9 116 aa3.48□□□□□ -1.85
RTTN-209ENST00000583043 HRNRQ86YZ3 2850 aaPredicted RBP3.48□□□□□ -1.85
RTTN-209ENST00000583043 FLNBO75369 2602 aaKnown RBP3.48□□□□□ -1.85
RTTN-209ENST00000583043 CENPEQ02224 2701 aa3.47□□□□□ -1.85
RTTN-209ENST00000583043 NBEAQ8NFP9 2946 aa3.47□□□□□ -1.85
RTTN-209ENST00000583043 ZFHX4Q86UP3 3567 aa3.47□□□□□ -1.85
RTTN-209ENST00000583043 KTN1-AS1Q86SY8 53 aa3.47□□□□□ -1.85
RTTN-209ENST00000583043 RETNLBQ9BQ08 111 aa3.47□□□□□ -1.85
RTTN-209ENST00000583043 HRES1P13985 223 aa3.47□□□□□ -1.85
RTTN-209ENST00000583043 OXTP01178 125 aa3.46□□□□□ -1.85
RTTN-209ENST00000583043 A0A087X002 238 aa3.46□□□□□ -1.86
RTTN-209ENST00000583043 MIR22HGQ0VDD5 57 aa3.46□□□□□ -1.86
RTTN-209ENST00000583043 Q5W150 140 aa3.46□□□□□ -1.86
RTTN-209ENST00000583043 CFAP47Q6ZTR5 3102 aa3.46□□□□□ -1.86
RTTN-209ENST00000583043 MAST4O15021 2626 aa3.46□□□□□ -1.86
RTTN-209ENST00000583043 NSD1Q96L73 2696 aaPredicted RBP3.45□□□□□ -1.86
RTTN-209ENST00000583043 APCP25054 2843 aa3.45□□□□□ -1.86
RTTN-209ENST00000583043 ANAPC11Q9NYG5 84 aa3.45□□□□□ -1.86
RTTN-209ENST00000583043 ASPMQ8IZT6 3477 aa3.45□□□□□ -1.86
RTTN-209ENST00000583043 LOC400499M0QZD8 3231 aa3.44□□□□□ -1.86
RTTN-209ENST00000583043 H3BS24 57 aa3.44□□□□□ -1.86
RTTN-209ENST00000583043 GCN1Q92616 2671 aaKnown RBP3.44□□□□□ -1.86
RTTN-209ENST00000583043 SMG1Q96Q15 3661 aaKnown RBP3.44□□□□□ -1.86
RTTN-209ENST00000583043 Q5VV11 94 aa3.44□□□□□ -1.86
RTTN-209ENST00000583043 ITPR1Q14643 2758 aa3.43□□□□□ -1.86
RTTN-209ENST00000583043 MGAM2Q2M2H8 2515 aa3.43□□□□□ -1.86
RTTN-209ENST00000583043 PANO1I0J062 215 aa3.43□□□□□ -1.86
RTTN-209ENST00000583043 LINC01554Q52M75 96 aa3.42□□□□□ -1.86
RTTN-209ENST00000583043 Q6ZSA8 131 aa3.42□□□□□ -1.86
RTTN-209ENST00000583043 UTP20O75691 2785 aaKnown RBP3.42□□□□□ -1.86
RTTN-209ENST00000583043 LCA10Q71F78 164 aa3.41□□□□□ -1.86
RTTN-209ENST00000583043 KRTAP10-1P60331 282 aa3.41□□□□□ -1.86
RTTN-209ENST00000583043 KRTAP11-1Q8IUC1 163 aa3.41□□□□□ -1.86
RTTN-209ENST00000583043 RBM12B-AS1Q9P1G2 102 aa3.41□□□□□ -1.86
RTTN-209ENST00000583043 PRR26Q8N8Z3 221 aa3.4□□□□□ -1.86
RTTN-209ENST00000583043 BOD1L1Q8NFC6 3051 aa3.39□□□□□ -1.87
RTTN-209ENST00000583043 DCHS1Q96JQ0 3298 aa3.39□□□□□ -1.87
RTTN-209ENST00000583043 NIPBLQ6KC79 2804 aaeCLIP3.39□□□□□ -1.87
RTTN-209ENST00000583043 A0A0A0MQY5 61 aa3.39□□□□□ -1.87
RTTN-209ENST00000583043 KRTAP10-2P60368 255 aa3.39□□□□□ -1.87
RTTN-209ENST00000583043 ITPR2Q14571 2701 aa3.38□□□□□ -1.87
RTTN-209ENST00000583043 LUZP6Q538Z0 58 aa3.38□□□□□ -1.87
RTTN-209ENST00000583043 BSNQ9UPA5 3926 aa3.38□□□□□ -1.87
RTTN-209ENST00000583043 KALRNO60229 2985 aa3.37□□□□□ -1.87
RTTN-209ENST00000583043 COL6A5A8TX70 2615 aa3.37□□□□□ -1.87
RTTN-209ENST00000583043 HIVEP1P15822 2718 aa3.37□□□□□ -1.87
RTTN-209ENST00000583043 ADGRG4Q8IZF6 3080 aa3.36□□□□□ -1.87
RTTN-209ENST00000583043 ATMQ13315 3056 aa3.36□□□□□ -1.87
RTTN-209ENST00000583043 LAMA5O15230 3695 aa3.35□□□□□ -1.87
RTTN-209ENST00000583043 MAP1AP78559 2803 aaPredicted RBP3.35□□□□□ -1.87
RTTN-209ENST00000583043 DMXL2Q8TDJ6 3036 aa3.35□□□□□ -1.87
RTTN-209ENST00000583043 STAB1Q9NY15 2570 aa3.35□□□□□ -1.87
RTTN-209ENST00000583043 KRTAP13-2Q52LG2 175 aa3.35□□□□□ -1.87
RTTN-209ENST00000583043 SPATA8Q6RVD6 105 aa3.35□□□□□ -1.87
RTTN-209ENST00000583043 DMXL1Q9Y485 3027 aa3.34□□□□□ -1.87
RTTN-209ENST00000583043 A0A1B0GU33 70 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms