RNA–Protein interactions for RNA: ENST00000580813.1

VNN3-214, Transcript of vanin 3, humanhuman

TSL 5

Gene VNN3, Length 558 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-214ENST00000580813 TOMM5Q8N4H5 51 aa0.56□□□□□ -2.32
VNN3-214ENST00000580813 APCP25054 2843 aa0.56□□□□□ -2.32
VNN3-214ENST00000580813 DEPDC5O75140 1603 aa0.56□□□□□ -2.32
VNN3-214ENST00000580813 CHD6Q8TD26 2715 aa0.56□□□□□ -2.32
VNN3-214ENST00000580813 CELSR2Q9HCU4 2923 aa0.55□□□□□ -2.32
VNN3-214ENST00000580813 LYNX1G3V0Z9 82 aa0.55□□□□□ -2.32
VNN3-214ENST00000580813 LINC00308Q8TCZ7 52 aa0.55□□□□□ -2.32
VNN3-214ENST00000580813 ABRACLQ9P1F3 81 aa0.55□□□□□ -2.32
VNN3-214ENST00000580813 AKAP6Q13023 2319 aa0.55□□□□□ -2.32
VNN3-214ENST00000580813 CSMD3Q7Z407 3707 aa0.55□□□□□ -2.32
VNN3-214ENST00000580813 ATRQ13535 2644 aa0.54□□□□□ -2.32
VNN3-214ENST00000580813 LINC01546A6NGU7 62 aa0.54□□□□□ -2.32
VNN3-214ENST00000580813 MRPL33O75394 65 aaKnown RBP0.54□□□□□ -2.32
VNN3-214ENST00000580813 MINOS1Q5TGZ0 78 aa0.54□□□□□ -2.32
VNN3-214ENST00000580813 DSPP15924 2871 aaKnown RBP0.54□□□□□ -2.32
VNN3-214ENST00000580813 LMO7Q8WWI1 1683 aa0.53□□□□□ -2.32
VNN3-214ENST00000580813 CHD9Q3L8U1 2897 aa0.53□□□□□ -2.32
VNN3-214ENST00000580813 ANK2Q01484 3957 aa0.53□□□□□ -2.32
VNN3-214ENST00000580813 KIAA0586Q9BVV6 1533 aa0.53□□□□□ -2.33
VNN3-214ENST00000580813 IQGAP2Q13576 1575 aa0.53□□□□□ -2.33
VNN3-214ENST00000580813 FAM208AQ9UK61 1670 aaKnown RBP0.53□□□□□ -2.33
VNN3-214ENST00000580813 CDC42BPAQ5VT25 1732 aa0.52□□□□□ -2.33
VNN3-214ENST00000580813 FRAS1Q86XX4 4008 aa0.52□□□□□ -2.33
VNN3-214ENST00000580813 BPTFQ12830 3046 aa0.52□□□□□ -2.33
VNN3-214ENST00000580813 PKDREJQ9NTG1 2253 aa0.52□□□□□ -2.33
VNN3-214ENST00000580813 TPRP12270 2363 aaKnown RBP0.52□□□□□ -2.33
VNN3-214ENST00000580813 ABCA2Q9BZC7 2435 aa0.52□□□□□ -2.33
VNN3-214ENST00000580813 DEFB109BQ30KR1 87 aa0.52□□□□□ -2.33
VNN3-214ENST00000580813 SMR3AQ99954 134 aa0.52□□□□□ -2.33
VNN3-214ENST00000580813 PCNX1Q96RV3 2341 aa0.52□□□□□ -2.33
VNN3-214ENST00000580813 TNXBP22105 4242 aa0.51□□□□□ -2.33
VNN3-214ENST00000580813 C6orf48Q9UBA6 75 aa0.51□□□□□ -2.33
VNN3-214ENST00000580813 SERF2P84101 59 aa0.5□□□□□ -2.33
VNN3-214ENST00000580813 WNK2Q9Y3S1 2297 aa0.5□□□□□ -2.33
VNN3-214ENST00000580813 PDE4DIPQ5VU43 2346 aa0.49□□□□□ -2.33
VNN3-214ENST00000580813 H0YGX0 51 aa0.49□□□□□ -2.33
VNN3-214ENST00000580813 S4R3F8 94 aa0.49□□□□□ -2.33
VNN3-214ENST00000580813 NCOR1O75376 2440 aa0.49□□□□□ -2.33
VNN3-214ENST00000580813 DDX60Q8IY21 1712 aaKnown RBP0.49□□□□□ -2.33
VNN3-214ENST00000580813 AKAP13Q12802 2813 aa0.49□□□□□ -2.33
VNN3-214ENST00000580813 KIF21BO75037 1637 aa0.49□□□□□ -2.33
VNN3-214ENST00000580813 TRANK1O15050 2925 aa0.48□□□□□ -2.33
VNN3-214ENST00000580813 VWFP04275 2813 aa0.48□□□□□ -2.33
VNN3-214ENST00000580813 HECTD1Q9ULT8 2610 aa0.48□□□□□ -2.33
VNN3-214ENST00000580813 USP24Q9UPU5 2620 aa0.48□□□□□ -2.33
VNN3-214ENST00000580813 PRM1P04553 51 aa0.47□□□□□ -2.33
VNN3-214ENST00000580813 WT1-ASQ06250 92 aa0.47□□□□□ -2.33
VNN3-214ENST00000580813 MUC5ACP98088 5654 aa0.47□□□□□ -2.33
VNN3-214ENST00000580813 TENM4Q6N022 2769 aa0.47□□□□□ -2.33
VNN3-214ENST00000580813 SPTA1P02549 2419 aa0.47□□□□□ -2.33
VNN3-214ENST00000580813 CSPG4Q6UVK1 2322 aa0.46□□□□□ -2.34
VNN3-214ENST00000580813 TMEM167BQ9NRX6 74 aa0.46□□□□□ -2.34
VNN3-214ENST00000580813 KAAG1Q9UBP8 84 aa0.46□□□□□ -2.34
VNN3-214ENST00000580813 TRPM2O94759 1503 aa0.46□□□□□ -2.34
VNN3-214ENST00000580813 ZFYVE26Q68DK2 2539 aa0.45□□□□□ -2.34
VNN3-214ENST00000580813 WFDC10BQ8IUB3 73 aa0.45□□□□□ -2.34
VNN3-214ENST00000580813 DEFB106AQ8N104 65 aa0.45□□□□□ -2.34
VNN3-214ENST00000580813 PRLHP81277 87 aa0.44□□□□□ -2.34
VNN3-214ENST00000580813 SPINK6Q6UWN8 80 aa0.44□□□□□ -2.34
VNN3-214ENST00000580813 EP300Q09472 2414 aaPredicted RBP0.44□□□□□ -2.34
VNN3-214ENST00000580813 ATP7AQ04656 1500 aa0.43□□□□□ -2.34
VNN3-214ENST00000580813 CHD8Q9HCK8 2581 aa0.43□□□□□ -2.34
VNN3-214ENST00000580813 KRTAP21-1Q3LI58 79 aa0.43□□□□□ -2.34
VNN3-214ENST00000580813 SMIM2Q9BVW6 85 aa0.42□□□□□ -2.34
VNN3-214ENST00000580813 FAT2Q9NYQ8 4349 aa0.42□□□□□ -2.34
VNN3-214ENST00000580813 OTOGQ6ZRI0 2925 aa0.42□□□□□ -2.34
VNN3-214ENST00000580813 MAP1BP46821 2468 aaKnown RBP0.42□□□□□ -2.34
VNN3-214ENST00000580813 BSNQ9UPA5 3926 aa0.42□□□□□ -2.34
VNN3-214ENST00000580813 TNRC18O15417 2968 aaPredicted RBP0.42□□□□□ -2.34
VNN3-214ENST00000580813 CEP290O15078 2479 aa0.41□□□□□ -2.34
VNN3-214ENST00000580813 MDN1Q9NU22 5596 aa0.41□□□□□ -2.34
VNN3-214ENST00000580813 CELSR1Q9NYQ6 3014 aa0.4□□□□□ -2.34
VNN3-214ENST00000580813 PKD1L2Q7Z442 2459 aa0.4□□□□□ -2.35
VNN3-214ENST00000580813 PHGR1C9JFL3 82 aa0.4□□□□□ -2.35
VNN3-214ENST00000580813 DEFB135Q30KP9 77 aa0.4□□□□□ -2.35
VNN3-214ENST00000580813 UBR5O95071 2799 aaPredicted RBP0.4□□□□□ -2.35
VNN3-214ENST00000580813 FSIP2Q5CZC0 6907 aa0.4□□□□□ -2.35
VNN3-214ENST00000580813 PRRC2CQ9Y520 2896 aaKnown RBP0.4□□□□□ -2.35
VNN3-214ENST00000580813 UNC79Q9P2D8 2635 aa0.4□□□□□ -2.35
VNN3-214ENST00000580813 SYNE1Q8NF91 8797 aaKnown RBP0.39□□□□□ -2.35
VNN3-214ENST00000580813 MMP24-AS1A0A0U1RRL7 71 aa0.39□□□□□ -2.35
VNN3-214ENST00000580813 NDUFA1O15239 70 aa0.39□□□□□ -2.35
VNN3-214ENST00000580813 NBASA2RRP1 2371 aa0.38□□□□□ -2.35
VNN3-214ENST00000580813 PRKDCP78527 4128 aaKnown RBP0.38□□□□□ -2.35
VNN3-214ENST00000580813 M0R2T5 61 aa0.38□□□□□ -2.35
VNN3-214ENST00000580813 MACF1Q9UPN3 7388 aaKnown RBP0.38□□□□□ -2.35
VNN3-214ENST00000580813 CREBBPQ92793 2442 aa0.38□□□□□ -2.35
VNN3-214ENST00000580813 SYNE2Q8WXH0 6885 aaKnown RBP0.37□□□□□ -2.35
VNN3-214ENST00000580813 SAMD9LQ8IVG5 1584 aa0.37□□□□□ -2.35
VNN3-214ENST00000580813 SPINK1P00995 79 aa0.37□□□□□ -2.35
VNN3-214ENST00000580813 NSD1Q96L73 2696 aaPredicted RBP0.37□□□□□ -2.35
VNN3-214ENST00000580813 HIVEP3Q5T1R4 2406 aa0.36□□□□□ -2.35
VNN3-214ENST00000580813 U3KQA8 63 aa0.36□□□□□ -2.35
VNN3-214ENST00000580813 CACNA1AO00555 2505 aa0.36□□□□□ -2.35
VNN3-214ENST00000580813 NAV2Q8IVL1 2488 aa0.36□□□□□ -2.35
VNN3-214ENST00000580813 SETXQ7Z333 2677 aaKnown RBP0.35□□□□□ -2.35
VNN3-214ENST00000580813 PDZD2O15018 2839 aa0.35□□□□□ -2.35
VNN3-214ENST00000580813 STAB1Q9NY15 2570 aa0.35□□□□□ -2.35
VNN3-214ENST00000580813 IGLV5-48A0A075B6I7 105 aa0.35□□□□□ -2.35
VNN3-214ENST00000580813 LYSTQ99698 3801 aa0.35□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms