RNA–Protein interactions for RNA: ENST00000566228.5

SNX29-205, Transcript of sorting nexin 29, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNX29, Length 8,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-205ENST00000566228 LINC00612Q8N6U2 182 aa6.83□□□□□ -1.32
SNX29-205ENST00000566228 NOTCH1P46531 2555 aa6.83□□□□□ -1.32
SNX29-205ENST00000566228 K7EIL1 84 aa6.83□□□□□ -1.32
SNX29-205ENST00000566228 HELZ2Q9BYK8 2649 aaKnown RBP6.83□□□□□ -1.32
SNX29-205ENST00000566228 XIRP2A4UGR9 3374 aa6.82□□□□□ -1.32
SNX29-205ENST00000566228 KRTAP16-1A8MUX0 517 aa6.79□□□□□ -1.32
SNX29-205ENST00000566228 A0A1W2PNM2 257 aa6.78□□□□□ -1.32
SNX29-205ENST00000566228 EIF4EBP3O60516 100 aaPredicted RBP6.76□□□□□ -1.33
SNX29-205ENST00000566228 A0A1W2PNN7 141 aa6.75□□□□□ -1.33
SNX29-205ENST00000566228 COL6A5A8TX70 2615 aa6.75□□□□□ -1.33
SNX29-205ENST00000566228 TEX15Q9BXT5 2789 aa6.73□□□□□ -1.33
SNX29-205ENST00000566228 ANAPC11Q9NYG5 84 aa6.73□□□□□ -1.33
SNX29-205ENST00000566228 OXTP01178 125 aa6.72□□□□□ -1.33
SNX29-205ENST00000566228 FP248Q71RG6 208 aaPredicted RBP6.72□□□□□ -1.33
SNX29-205ENST00000566228 CHD6Q8TD26 2715 aa6.72□□□□□ -1.33
SNX29-205ENST00000566228 M0QZ58 72 aa6.69□□□□□ -1.34
SNX29-205ENST00000566228 KRTAP10-11P60412 298 aa6.69□□□□□ -1.34
SNX29-205ENST00000566228 GIG44P09565 113 aaPredicted RBP6.69□□□□□ -1.34
SNX29-205ENST00000566228 PRUNE2Q8WUY3 3088 aa6.68□□□□□ -1.34
SNX29-205ENST00000566228 CDH23Q9H251 3354 aa6.67□□□□□ -1.34
SNX29-205ENST00000566228 LAMA3Q16787 3333 aa6.66□□□□□ -1.34
SNX29-205ENST00000566228 PLAC8Q9NZF1 115 aa6.65□□□□□ -1.35
SNX29-205ENST00000566228 IGSF10Q6WRI0 2623 aa6.63□□□□□ -1.35
SNX29-205ENST00000566228 TEP1Q99973 2627 aaKnown RBP6.62□□□□□ -1.35
SNX29-205ENST00000566228 Q5W150 140 aa6.62□□□□□ -1.35
SNX29-205ENST00000566228 SETXQ7Z333 2677 aaKnown RBP6.62□□□□□ -1.35
SNX29-205ENST00000566228 RANBP2P49792 3224 aaKnown RBP6.62□□□□□ -1.35
SNX29-205ENST00000566228 A0A0G2JQZ4 141 aa6.6□□□□□ -1.35
SNX29-205ENST00000566228 MMP24-AS1A0A0U1RRL7 71 aa6.6□□□□□ -1.35
SNX29-205ENST00000566228 Q5VV11 94 aa6.58□□□□□ -1.36
SNX29-205ENST00000566228 CASC10Q5T4H9 136 aa6.58□□□□□ -1.36
SNX29-205ENST00000566228 NSD1Q96L73 2696 aaPredicted RBP6.56□□□□□ -1.36
SNX29-205ENST00000566228 C20orf166-AS1Q96NR2 134 aa6.55□□□□□ -1.36
SNX29-205ENST00000566228 SPRR1BP22528 89 aa6.55□□□□□ -1.36
SNX29-205ENST00000566228 SPATA8Q6RVD6 105 aa6.54□□□□□ -1.36
SNX29-205ENST00000566228 PANO1I0J062 215 aa6.53□□□□□ -1.36
SNX29-205ENST00000566228 DNAH14Q0VDD8 3507 aa6.53□□□□□ -1.36
SNX29-205ENST00000566228 LINC00472Q9H8W2 130 aa6.53□□□□□ -1.36
SNX29-205ENST00000566228 PRAC1Q96KF2 57 aa6.52□□□□□ -1.37
SNX29-205ENST00000566228 ITPR2Q14571 2701 aa6.52□□□□□ -1.37
SNX29-205ENST00000566228 ADM2Q7Z4H4 148 aa6.52□□□□□ -1.37
SNX29-205ENST00000566228 SPRR1AP35321 89 aa6.51□□□□□ -1.37
SNX29-205ENST00000566228 CHD7Q9P2D1 2997 aa6.5□□□□□ -1.37
SNX29-205ENST00000566228 HTTP42858 3142 aa6.5□□□□□ -1.37
SNX29-205ENST00000566228 SZT2Q5T011 3432 aa6.5□□□□□ -1.37
SNX29-205ENST00000566228 GCN1Q92616 2671 aaKnown RBP6.48□□□□□ -1.37
SNX29-205ENST00000566228 Q8NDZ9 215 aa6.47□□□□□ -1.37
SNX29-205ENST00000566228 CELSR3Q9NYQ7 3312 aa6.47□□□□□ -1.37
SNX29-205ENST00000566228 Q5VSD8 79 aa6.47□□□□□ -1.37
SNX29-205ENST00000566228 KRTAP10-3P60369 221 aa6.47□□□□□ -1.37
SNX29-205ENST00000566228 Q6ZR54 194 aa6.47□□□□□ -1.37
SNX29-205ENST00000566228 LAMA2P24043 3122 aaKnown RBP6.46□□□□□ -1.38
SNX29-205ENST00000566228 RPS29P62273 56 aaKnown RBP6.44□□□□□ -1.38
SNX29-205ENST00000566228 TNP1P09430 55 aa6.44□□□□□ -1.38
SNX29-205ENST00000566228 UNC80Q8N2C7 3258 aa6.43□□□□□ -1.38
SNX29-205ENST00000566228 PP632Q6XCG6 107 aa6.43□□□□□ -1.38
SNX29-205ENST00000566228 Q5XG85 94 aa6.42□□□□□ -1.38
SNX29-205ENST00000566228 COL6A3P12111 3177 aa6.41□□□□□ -1.38
SNX29-205ENST00000566228 SPTBN5Q9NRC6 3674 aaKnown RBP6.41□□□□□ -1.38
SNX29-205ENST00000566228 A0A087X002 238 aa6.39□□□□□ -1.39
SNX29-205ENST00000566228 A0A096LNT2 108 aa6.39□□□□□ -1.39
SNX29-205ENST00000566228 KRTAP1-3Q8IUG1 177 aa6.38□□□□□ -1.39
SNX29-205ENST00000566228 KRTAP25-1Q3LHN0 102 aa6.38□□□□□ -1.39
SNX29-205ENST00000566228 A8MUU9 505 aa6.37□□□□□ -1.39
SNX29-205ENST00000566228 ZNF292O60281 2723 aa6.36□□□□□ -1.39
SNX29-205ENST00000566228 A0A0C4DFX4 3053 aa6.35□□□□□ -1.39
SNX29-205ENST00000566228 USP34Q70CQ2 3546 aa6.34□□□□□ -1.39
SNX29-205ENST00000566228 APCP25054 2843 aa6.33□□□□□ -1.4
SNX29-205ENST00000566228 EYSQ5T1H1 3165 aa6.33□□□□□ -1.4
SNX29-205ENST00000566228 LCE6AA0A183 80 aa6.32□□□□□ -1.4
SNX29-205ENST00000566228 KRTAP26-1Q6PEX3 210 aa6.31□□□□□ -1.4
SNX29-205ENST00000566228 WDFY4Q6ZS81 3184 aa6.3□□□□□ -1.4
SNX29-205ENST00000566228 KRTAP1-1Q07627 177 aa6.29□□□□□ -1.4
SNX29-205ENST00000566228 TRIOO75962 3097 aa6.29□□□□□ -1.4
SNX29-205ENST00000566228 MAP1AP78559 2803 aaPredicted RBP6.29□□□□□ -1.4
SNX29-205ENST00000566228 UTP20O75691 2785 aaKnown RBP6.29□□□□□ -1.4
SNX29-205ENST00000566228 CFAP54Q96N23 3096 aa6.28□□□□□ -1.4
SNX29-205ENST00000566228 VCANP13611 3396 aa6.27□□□□□ -1.41
SNX29-205ENST00000566228 NDUFAF8A1L188 74 aa6.26□□□□□ -1.41
SNX29-205ENST00000566228 P0C880 135 aa6.25□□□□□ -1.41
SNX29-205ENST00000566228 TNRC18O15417 2968 aaPredicted RBP6.23□□□□□ -1.41
SNX29-205ENST00000566228 C10orf95Q9H7T3 257 aa6.22□□□□□ -1.41
SNX29-205ENST00000566228 PRO2289Q9P1D8 64 aa6.2□□□□□ -1.42
SNX29-205ENST00000566228 TRANK1O15050 2925 aa6.2□□□□□ -1.42
SNX29-205ENST00000566228 LAMA1P25391 3075 aa6.2□□□□□ -1.42
SNX29-205ENST00000566228 MGAQ8IWI9 3026 aa6.2□□□□□ -1.42
SNX29-205ENST00000566228 NOTCH2NLQ7Z3S9 236 aa6.19□□□□□ -1.42
SNX29-205ENST00000566228 CHD9Q3L8U1 2897 aa6.18□□□□□ -1.42
SNX29-205ENST00000566228 VPS13AQ96RL7 3174 aa6.17□□□□□ -1.42
SNX29-205ENST00000566228 SPEGQ15772 3267 aa6.17□□□□□ -1.42
SNX29-205ENST00000566228 KRTAP29-1A8MX34 341 aaPredicted RBP6.15□□□□□ -1.43
SNX29-205ENST00000566228 KRTAP10-1P60331 282 aa6.14□□□□□ -1.43
SNX29-205ENST00000566228 A6NN06 94 aa6.13□□□□□ -1.43
SNX29-205ENST00000566228 UBR5O95071 2799 aaPredicted RBP6.12□□□□□ -1.43
SNX29-205ENST00000566228 MYO15AQ9UKN7 3530 aa6.12□□□□□ -1.43
SNX29-205ENST00000566228 TENM3Q9P273 2699 aa6.11□□□□□ -1.43
SNX29-205ENST00000566228 CYSTM1Q9H1C7 97 aa6.07□□□□□ -1.44
SNX29-205ENST00000566228 KRTAP4-16G5E9R7 235 aaPredicted RBP6.07□□□□□ -1.44
SNX29-205ENST00000566228 ASPMQ8IZT6 3477 aa6.06□□□□□ -1.44
SNX29-205ENST00000566228 NBEAL2Q6ZNJ1 2754 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms