RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 NUP188Q5SRE5 1749 aa0.13□□□□□ -2.39
CHD9-211ENST00000564600 RRBP1Q9P2E9 1410 aaKnown RBP0.13□□□□□ -2.39
CHD9-211ENST00000564600 ANKRD50Q9ULJ7 1429 aa0.13□□□□□ -2.39
CHD9-211ENST00000564600 DCHS1Q96JQ0 3298 aa0.12□□□□□ -2.39
CHD9-211ENST00000564600 FREM2Q5SZK8 3169 aa0.12□□□□□ -2.39
CHD9-211ENST00000564600 EYSQ5T1H1 3165 aa0.12□□□□□ -2.39
CHD9-211ENST00000564600 PRUNE2Q8WUY3 3088 aa0.12□□□□□ -2.39
CHD9-211ENST00000564600 SRCAPQ6ZRS2 3230 aa0.12□□□□□ -2.39
CHD9-211ENST00000564600 DMXL1Q9Y485 3027 aa0.12□□□□□ -2.39
CHD9-211ENST00000564600 SHPRHQ149N8 1683 aa0.12□□□□□ -2.39
CHD9-211ENST00000564600 TTC37Q6PGP7 1564 aa0.12□□□□□ -2.39
CHD9-211ENST00000564600 MAGI2Q86UL8 1455 aa0.12□□□□□ -2.39
CHD9-211ENST00000564600 SPEGQ15772 3267 aa0.12□□□□□ -2.39
CHD9-211ENST00000564600 UNC80Q8N2C7 3258 aa0.12□□□□□ -2.39
CHD9-211ENST00000564600 DNAJC13O75165 2243 aa0.12□□□□□ -2.39
CHD9-211ENST00000564600 NDUFA3O95167 84 aa0.12□□□□□ -2.39
CHD9-211ENST00000564600 NREPQ16612 68 aa0.12□□□□□ -2.39
CHD9-211ENST00000564600 NMES1Q9C002 83 aa0.12□□□□□ -2.39
CHD9-211ENST00000564600 NOP10Q9NPE3 64 aaKnown RBP0.12□□□□□ -2.39
CHD9-211ENST00000564600 ABRACLQ9P1F3 81 aa0.12□□□□□ -2.39
CHD9-211ENST00000564600 ANKRD36A6QL64 1941 aa0.12□□□□□ -2.39
CHD9-211ENST00000564600 MON2Q7Z3U7 1717 aa0.12□□□□□ -2.39
CHD9-211ENST00000564600 PKD1L3Q7Z443 1732 aa0.12□□□□□ -2.39
CHD9-211ENST00000564600 CRYBG1Q9Y4K1 1723 aa0.12□□□□□ -2.39
CHD9-211ENST00000564600 SLIT1O75093 1534 aa0.12□□□□□ -2.39
CHD9-211ENST00000564600 MKI67P46013 3256 aaKnown RBP0.12□□□□□ -2.39
CHD9-211ENST00000564600 HFM1A2PYH4 1435 aa0.12□□□□□ -2.39
CHD9-211ENST00000564600 CEP162Q5TB80 1403 aa0.12□□□□□ -2.39
CHD9-211ENST00000564600 CFAP54Q96N23 3096 aa0.12□□□□□ -2.39
CHD9-211ENST00000564600 BCORQ6W2J9 1755 aa0.11□□□□□ -2.39
CHD9-211ENST00000564600 USF3Q68DE3 2245 aa0.11□□□□□ -2.39
CHD9-211ENST00000564600 C5P01031 1676 aa0.11□□□□□ -2.39
CHD9-211ENST00000564600 TOPAZ1Q8N9V7 1692 aa0.11□□□□□ -2.39
CHD9-211ENST00000564600 MED14O60244 1454 aa0.11□□□□□ -2.39
CHD9-211ENST00000564600 RALGAPBQ86X10 1494 aa0.11□□□□□ -2.39
CHD9-211ENST00000564600 NRXN1Q9ULB1 1477 aa0.11□□□□□ -2.39
CHD9-211ENST00000564600 LAMA1P25391 3075 aa0.11□□□□□ -2.39
CHD9-211ENST00000564600 ETDCA0A1B0GVM5 59 aa0.11□□□□□ -2.39
CHD9-211ENST00000564600 BIRC6Q9NR09 4857 aa0.11□□□□□ -2.39
CHD9-211ENST00000564600 NEXMIFQ5QGS0 1516 aa0.11□□□□□ -2.39
CHD9-211ENST00000564600 VPS13AQ96RL7 3174 aa0.11□□□□□ -2.39
CHD9-211ENST00000564600 RGPD4Q7Z3J3 1758 aa0.11□□□□□ -2.39
CHD9-211ENST00000564600 THOC2Q8NI27 1593 aaKnown RBP0.11□□□□□ -2.39
CHD9-211ENST00000564600 RB1CC1Q8TDY2 1594 aa0.11□□□□□ -2.39
CHD9-211ENST00000564600 LAMA3Q16787 3333 aa0.1□□□□□ -2.39
CHD9-211ENST00000564600 KIAA1551Q9HCM1 1747 aa0.1□□□□□ -2.39
CHD9-211ENST00000564600 FMN2Q9NZ56 1722 aa0.1□□□□□ -2.39
CHD9-211ENST00000564600 TARBP1Q13395 1621 aaKnown RBP0.1□□□□□ -2.39
CHD9-211ENST00000564600 AKAP12Q02952 1782 aa0.1□□□□□ -2.39
CHD9-211ENST00000564600 PAPPA2Q9BXP8 1791 aa0.1□□□□□ -2.39
CHD9-211ENST00000564600 MAGI3Q5TCQ9 1506 aa0.1□□□□□ -2.39
CHD9-211ENST00000564600 LRRC7Q96NW7 1537 aa0.1□□□□□ -2.39
CHD9-211ENST00000564600 SPRR2DP22532 72 aa0.1□□□□□ -2.39
CHD9-211ENST00000564600 SPRR2BP35325 72 aa0.1□□□□□ -2.39
CHD9-211ENST00000564600 DEFA5Q01523 94 aa0.1□□□□□ -2.39
CHD9-211ENST00000564600 DEFB114Q30KQ6 69 aa0.1□□□□□ -2.39
CHD9-211ENST00000564600 SMIM5Q71RC9 77 aa0.1□□□□□ -2.39
CHD9-211ENST00000564600 ADGRG4Q8IZF6 3080 aa0.1□□□□□ -2.39
CHD9-211ENST00000564600 RANBP2P49792 3224 aaKnown RBP0.1□□□□□ -2.39
CHD9-211ENST00000564600 SMARCA2P51531 1590 aa0.1□□□□□ -2.39
CHD9-211ENST00000564600 CC2D2AQ9P2K1 1620 aa0.09□□□□□ -2.39
CHD9-211ENST00000564600 MAP3K4Q9Y6R4 1608 aa0.09□□□□□ -2.39
CHD9-211ENST00000564600 GOLGB1Q14789 3259 aaKnown RBP0.09□□□□□ -2.39
CHD9-211ENST00000564600 RGPD3A6NKT7 1758 aaPredicted RBP0.09□□□□□ -2.39
CHD9-211ENST00000564600 LYNX1G3V0Z9 82 aa0.09□□□□□ -2.4
CHD9-211ENST00000564600 H3BNG1 76 aa0.09□□□□□ -2.4
CHD9-211ENST00000564600 PRLHP81277 87 aa0.09□□□□□ -2.4
CHD9-211ENST00000564600 MINOS1Q5TGZ0 78 aa0.09□□□□□ -2.4
CHD9-211ENST00000564600 KCNQ1DNQ9H478 68 aa0.09□□□□□ -2.4
CHD9-211ENST00000564600 TMEM167BQ9NRX6 74 aa0.09□□□□□ -2.4
CHD9-211ENST00000564600 ZFHX3Q15911 3703 aa0.09□□□□□ -2.4
CHD9-211ENST00000564600 HRNRQ86YZ3 2850 aaPredicted RBP0.09□□□□□ -2.4
CHD9-211ENST00000564600 PCNTO95613 3336 aa0.09□□□□□ -2.4
CHD9-211ENST00000564600 CENPFP49454 3210 aa0.09□□□□□ -2.4
CHD9-211ENST00000564600 NCOA2Q15596 1464 aa0.09□□□□□ -2.4
CHD9-211ENST00000564600 MUC3AQ02505 3323 aa0.08□□□□□ -2.4
CHD9-211ENST00000564600 ARHGEF5Q12774 1597 aa0.08□□□□□ -2.4
CHD9-211ENST00000564600 LCE6AA0A183 80 aa0.08□□□□□ -2.4
CHD9-211ENST00000564600 IAPPP10997 89 aa0.08□□□□□ -2.4
CHD9-211ENST00000564600 TDRG1Q3Y452 100 aa0.08□□□□□ -2.4
CHD9-211ENST00000564600 ENHOQ6UWT2 76 aa0.08□□□□□ -2.4
CHD9-211ENST00000564600 PPLO60437 1756 aa0.08□□□□□ -2.4
CHD9-211ENST00000564600 LTN1O94822 1766 aa0.08□□□□□ -2.4
CHD9-211ENST00000564600 RGPD2P0DJD1 1756 aa0.08□□□□□ -2.4
CHD9-211ENST00000564600 KIF14Q15058 1648 aa0.08□□□□□ -2.4
CHD9-211ENST00000564600 MYO3AQ8NEV4 1616 aa0.08□□□□□ -2.4
CHD9-211ENST00000564600 SZT2Q5T011 3432 aa0.08□□□□□ -2.4
CHD9-211ENST00000564600 LAMA5O15230 3695 aa0.08□□□□□ -2.4
CHD9-211ENST00000564600 COL4A6Q14031 1691 aa0.08□□□□□ -2.4
CHD9-211ENST00000564600 DUOX2Q9NRD8 1548 aa0.08□□□□□ -2.4
CHD9-211ENST00000564600 USP34Q70CQ2 3546 aa0.07□□□□□ -2.4
CHD9-211ENST00000564600 VCANP13611 3396 aa0.07□□□□□ -2.4
CHD9-211ENST00000564600 CDH23Q9H251 3354 aa0.07□□□□□ -2.4
CHD9-211ENST00000564600 DEPDC5O75140 1603 aa0.07□□□□□ -2.4
CHD9-211ENST00000564600 SHROOM2Q13796 1616 aa0.07□□□□□ -2.4
CHD9-211ENST00000564600 CICQ96RK0 1608 aaPredicted RBP0.07□□□□□ -2.4
CHD9-211ENST00000564600 MMP24-AS1A0A0U1RRL7 71 aa0.07□□□□□ -2.4
CHD9-211ENST00000564600 SMIM27A0A1W2PRY6 76 aa0.07□□□□□ -2.4
CHD9-211ENST00000564600 H0YGX0 51 aa0.07□□□□□ -2.4
CHD9-211ENST00000564600 WT1-ASQ06250 92 aa0.07□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms