RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 ORAOV1Q8WV07 137 aa2.83□□□□□ -1.96
CKAP4-203ENST00000553039 SPANXB1Q9NS25 103 aaPredicted RBP2.83□□□□□ -1.96
CKAP4-203ENST00000553039 TOMM7Q9P0U1 55 aa2.83□□□□□ -1.96
CKAP4-203ENST00000553039 SSPOA2VEC9 5147 aa2.83□□□□□ -1.96
CKAP4-203ENST00000553039 FCGBPQ9Y6R7 5405 aaPredicted RBP2.82□□□□□ -1.96
CKAP4-203ENST00000553039 TRBV30A0A0K0K1B3 111 aa2.82□□□□□ -1.96
CKAP4-203ENST00000553039 NDUFC2-KCTD14E9PQ53 114 aa2.82□□□□□ -1.96
CKAP4-203ENST00000553039 CXCL5P42830 114 aa2.82□□□□□ -1.96
CKAP4-203ENST00000553039 CKS1BP61024 79 aa2.82□□□□□ -1.96
CKAP4-203ENST00000553039 UNQ6190/PRO20217Q6UXQ8 127 aa2.82□□□□□ -1.96
CKAP4-203ENST00000553039 Q8IZM0 81 aa2.82□□□□□ -1.96
CKAP4-203ENST00000553039 COPS9Q8WXC6 57 aa2.82□□□□□ -1.96
CKAP4-203ENST00000553039 ZNF625Q96I27 306 aaPredicted RBP2.82□□□□□ -1.96
CKAP4-203ENST00000553039 PSPHP1O15172 72 aa2.81□□□□□ -1.96
CKAP4-203ENST00000553039 SLC25A20O43772 301 aa2.81□□□□□ -1.96
CKAP4-203ENST00000553039 MEIG1Q5JSS6 88 aa2.81□□□□□ -1.96
CKAP4-203ENST00000553039 CAMK2N1Q7Z7J9 78 aa2.81□□□□□ -1.96
CKAP4-203ENST00000553039 SPANXDQ9BXN6 97 aa2.81□□□□□ -1.96
CKAP4-203ENST00000553039 NHP2Q9NX24 153 aaKnown RBP2.81□□□□□ -1.96
CKAP4-203ENST00000553039 SPANXCQ9NY87 97 aa2.81□□□□□ -1.96
CKAP4-203ENST00000553039 C6orf48Q9UBA6 75 aa2.81□□□□□ -1.96
CKAP4-203ENST00000553039 SMIM13P0DJ93 91 aa2.8□□□□□ -1.96
CKAP4-203ENST00000553039 IFITM1P13164 125 aa2.8□□□□□ -1.96
CKAP4-203ENST00000553039 FXYD2P54710 66 aa2.8□□□□□ -1.96
CKAP4-203ENST00000553039 C9orf129Q5T035 196 aaKnown RBP2.8□□□□□ -1.96
CKAP4-203ENST00000553039 ERG28Q9UKR5 140 aa2.8□□□□□ -1.96
CKAP4-203ENST00000553039 A0A0B4J2C4 111 aa2.79□□□□□ -1.96
CKAP4-203ENST00000553039 A0A1B0GV90 55 aa2.79□□□□□ -1.96
CKAP4-203ENST00000553039 K7ERJ3 54 aa2.79□□□□□ -1.96
CKAP4-203ENST00000553039 TAX1BP3O14907 124 aa2.79□□□□□ -1.96
CKAP4-203ENST00000553039 LINC00158P58513 81 aa2.79□□□□□ -1.96
CKAP4-203ENST00000553039 COX17Q14061 63 aa2.79□□□□□ -1.96
CKAP4-203ENST00000553039 MUSTN1Q8IVN3 82 aa2.79□□□□□ -1.96
CKAP4-203ENST00000553039 RAB37Q96AX2 223 aa2.79□□□□□ -1.96
CKAP4-203ENST00000553039 SYNE2Q8WXH0 6885 aaKnown RBP2.79□□□□□ -1.96
CKAP4-203ENST00000553039 NPC2P61916 151 aa2.78□□□□□ -1.96
CKAP4-203ENST00000553039 RPS29P62273 56 aaKnown RBP2.78□□□□□ -1.96
CKAP4-203ENST00000553039 LYRM7Q5U5X0 104 aa2.78□□□□□ -1.96
CKAP4-203ENST00000553039 C2orf82Q6UX34 121 aa2.78□□□□□ -1.96
CKAP4-203ENST00000553039 C3orf22Q8N5N4 141 aa2.78□□□□□ -1.96
CKAP4-203ENST00000553039 MIR7-3HGQ8N6C7 128 aa2.78□□□□□ -1.96
CKAP4-203ENST00000553039 LINC00308Q8TCZ7 52 aa2.78□□□□□ -1.96
CKAP4-203ENST00000553039 LINC00167Q96N53 147 aa2.78□□□□□ -1.96
CKAP4-203ENST00000553039 H3BUT2 72 aa2.77□□□□□ -1.97
CKAP4-203ENST00000553039 FABP2P12104 132 aa2.77□□□□□ -1.97
CKAP4-203ENST00000553039 Q6Q795 121 aa2.77□□□□□ -1.97
CKAP4-203ENST00000553039 KRTAP9-8Q9BYQ0 159 aa2.77□□□□□ -1.97
CKAP4-203ENST00000553039 SND1-IT1Q9HBX3 110 aa2.77□□□□□ -1.97
CKAP4-203ENST00000553039 PRO1854Q9UHT4 67 aa2.77□□□□□ -1.97
CKAP4-203ENST00000553039 USH2AO75445 5202 aa2.76□□□□□ -1.97
CKAP4-203ENST00000553039 SMIM26A0A096LP01 95 aa2.76□□□□□ -1.97
CKAP4-203ENST00000553039 A0A1W2PPM0 123 aa2.76□□□□□ -1.97
CKAP4-203ENST00000553039 NDUFS5O43920 106 aa2.76□□□□□ -1.97
CKAP4-203ENST00000553039 SOSTDC1Q6X4U4 206 aa2.76□□□□□ -1.97
CKAP4-203ENST00000553039 GTF2H5Q6ZYL4 71 aa2.76□□□□□ -1.97
CKAP4-203ENST00000553039 KRTAP13-1Q8IUC0 172 aa2.76□□□□□ -1.97
CKAP4-203ENST00000553039 ZNF706Q9Y5V0 76 aaPredicted RBP2.76□□□□□ -1.97
CKAP4-203ENST00000553039 TRAV13-2A0A0B4J235 113 aa2.75□□□□□ -1.97
CKAP4-203ENST00000553039 LOC107984156A0A0G2JMH3 177 aa2.75□□□□□ -1.97
CKAP4-203ENST00000553039 H7C2G1 150 aa2.75□□□□□ -1.97
CKAP4-203ENST00000553039 K7EP34 96 aa2.75□□□□□ -1.97
CKAP4-203ENST00000553039 PSMB2P49721 201 aa2.75□□□□□ -1.97
CKAP4-203ENST00000553039 KRTAP19-6Q3LI70 58 aa2.75□□□□□ -1.97
CKAP4-203ENST00000553039 C6orf99Q4VX62 202 aa2.75□□□□□ -1.97
CKAP4-203ENST00000553039 LCE1AQ5T7P2 110 aa2.75□□□□□ -1.97
CKAP4-203ENST00000553039 SSBP3-AS1Q7Z2R9 100 aa2.75□□□□□ -1.97
CKAP4-203ENST00000553039 ARL17AQ8IVW1 177 aa2.75□□□□□ -1.97
CKAP4-203ENST00000553039 NAA38Q9BRA0 125 aaKnown RBP2.75□□□□□ -1.97
CKAP4-203ENST00000553039 XAGE1AQ9HD64 81 aa2.75□□□□□ -1.97
CKAP4-203ENST00000553039 PRO0628Q9UI54 55 aa2.75□□□□□ -1.97
CKAP4-203ENST00000553039 SPCS1Q9Y6A9 102 aa2.75□□□□□ -1.97
CKAP4-203ENST00000553039 TRBV20-1A0A075B6N2 111 aa2.74□□□□□ -1.97
CKAP4-203ENST00000553039 IGHV6-1A0A0B4J1U7 121 aa2.74□□□□□ -1.97
CKAP4-203ENST00000553039 NDUFC2O95298 119 aa2.74□□□□□ -1.97
CKAP4-203ENST00000553039 COX6CP09669 75 aa2.74□□□□□ -1.97
CKAP4-203ENST00000553039 IGKV2-28A0A075B6P5 120 aa2.73□□□□□ -1.97
CKAP4-203ENST00000553039 IGKV2D-28P01615 120 aa2.73□□□□□ -1.97
CKAP4-203ENST00000553039 SCGB1C2P0DMR2 95 aa2.73□□□□□ -1.97
CKAP4-203ENST00000553039 OR13C6PQ8NH95 151 aa2.73□□□□□ -1.97
CKAP4-203ENST00000553039 MACF1Q9UPN3 7388 aaKnown RBP2.72□□□□□ -1.97
CKAP4-203ENST00000553039 TRBV10-2A0A0K0K1G8 114 aa2.72□□□□□ -1.97
CKAP4-203ENST00000553039 NCR3O14931 201 aa2.72□□□□□ -1.97
CKAP4-203ENST00000553039 KRTAP10-10P60014 251 aa2.72□□□□□ -1.97
CKAP4-203ENST00000553039 PRLHP81277 87 aa2.72□□□□□ -1.97
CKAP4-203ENST00000553039 ATXN8Q156A1 80 aa2.72□□□□□ -1.97
CKAP4-203ENST00000553039 C4orf26Q17RF5 130 aa2.72□□□□□ -1.97
CKAP4-203ENST00000553039 S100A7L2Q5SY68 101 aa2.72□□□□□ -1.97
CKAP4-203ENST00000553039 SPRR4Q96PI1 79 aa2.72□□□□□ -1.97
CKAP4-203ENST00000553039 HIGD2AQ9BW72 106 aa2.72□□□□□ -1.97
CKAP4-203ENST00000553039 TMEM126AQ9H061 195 aa2.72□□□□□ -1.97
CKAP4-203ENST00000553039 C9orf92A6NGG3 77 aa2.71□□□□□ -1.98
CKAP4-203ENST00000553039 H3BMG7 143 aa2.71□□□□□ -1.98
CKAP4-203ENST00000553039 TCL1BO95988 128 aa2.71□□□□□ -1.98
CKAP4-203ENST00000553039 KRTAP2-3P0C7H8 128 aa2.71□□□□□ -1.98
CKAP4-203ENST00000553039 MT3P25713 68 aa2.71□□□□□ -1.98
CKAP4-203ENST00000553039 KRTAP2-4Q9BYR9 128 aa2.71□□□□□ -1.98
CKAP4-203ENST00000553039 F8W1H4 67 aa2.7□□□□□ -1.98
CKAP4-203ENST00000553039 H0YGX0 51 aa2.7□□□□□ -1.98
CKAP4-203ENST00000553039 M0R378 163 aa2.7□□□□□ -1.98
CKAP4-203ENST00000553039 SMIM11BQ8TCY0 68 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms