RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 TEX49A0A1B0GTD5 131 aa5.28□□□□□ -1.56
SNHG1-215ENST00000540904 H7C2G1 150 aa5.28□□□□□ -1.56
SNHG1-215ENST00000540904 SLC25A20O43772 301 aa5.28□□□□□ -1.56
SNHG1-215ENST00000540904 CFC1BP0CG36 223 aa5.28□□□□□ -1.56
SNHG1-215ENST00000540904 CFC1P0CG37 223 aa5.28□□□□□ -1.56
SNHG1-215ENST00000540904 RAB37Q96AX2 223 aa5.28□□□□□ -1.56
SNHG1-215ENST00000540904 KRTAP4-11Q9BYQ6 195 aa5.28□□□□□ -1.56
SNHG1-215ENST00000540904 NHP2Q9NX24 153 aaKnown RBP5.28□□□□□ -1.56
SNHG1-215ENST00000540904 LINC00575Q6W349 94 aa5.27□□□□□ -1.57
SNHG1-215ENST00000540904 CEND1Q8N111 149 aa5.27□□□□□ -1.57
SNHG1-215ENST00000540904 IGLV5-48A0A075B6I7 105 aa5.26□□□□□ -1.57
SNHG1-215ENST00000540904 IGLV7-46A0A075B6I9 117 aa5.26□□□□□ -1.57
SNHG1-215ENST00000540904 UBR4Q5T4S7 5183 aa5.26□□□□□ -1.57
SNHG1-215ENST00000540904 LRP2P98164 4655 aa5.25□□□□□ -1.57
SNHG1-215ENST00000540904 A0A0B4J2C4 111 aa5.25□□□□□ -1.57
SNHG1-215ENST00000540904 TMEM238LA0A1B0GVL6 79 aa5.25□□□□□ -1.57
SNHG1-215ENST00000540904 hADV29S1A0JD25 119 aa5.25□□□□□ -1.57
SNHG1-215ENST00000540904 LINC01547P58512 204 aaPredicted RBP5.25□□□□□ -1.57
SNHG1-215ENST00000540904 BVES-AS1Q5T3Y7 98 aa5.25□□□□□ -1.57
SNHG1-215ENST00000540904 HRCT1Q6UXD1 115 aa5.25□□□□□ -1.57
SNHG1-215ENST00000540904 Q8N377 158 aa5.25□□□□□ -1.57
SNHG1-215ENST00000540904 FXYD2P54710 66 aa5.24□□□□□ -1.57
SNHG1-215ENST00000540904 Q6ZQY7 126 aa5.24□□□□□ -1.57
SNHG1-215ENST00000540904 SMIM29Q86T20 159 aa5.24□□□□□ -1.57
SNHG1-215ENST00000540904 RPS29P62273 56 aaKnown RBP5.23□□□□□ -1.57
SNHG1-215ENST00000540904 PRO1933Q9H354 126 aa5.23□□□□□ -1.57
SNHG1-215ENST00000540904 UQCR10Q9UDW1 63 aa5.23□□□□□ -1.57
SNHG1-215ENST00000540904 HSD52Q0P140 79 aa5.22□□□□□ -1.57
SNHG1-215ENST00000540904 TPRXLQ17RH7 258 aa5.22□□□□□ -1.57
SNHG1-215ENST00000540904 FP248Q71RG6 208 aaPredicted RBP5.22□□□□□ -1.57
SNHG1-215ENST00000540904 PRO1854Q9UHT4 67 aa5.22□□□□□ -1.57
SNHG1-215ENST00000540904 F8WEM9 126 aa5.21□□□□□ -1.58
SNHG1-215ENST00000540904 KRTAP19-4Q3LI73 84 aa5.21□□□□□ -1.58
SNHG1-215ENST00000540904 CDIP1Q9H305 208 aa5.21□□□□□ -1.58
SNHG1-215ENST00000540904 LPAP08519 4548 aa5.21□□□□□ -1.58
SNHG1-215ENST00000540904 A0A0G2JQZ4 141 aa5.2□□□□□ -1.58
SNHG1-215ENST00000540904 KRTAP9-7A8MTY7 169 aa5.2□□□□□ -1.58
SNHG1-215ENST00000540904 H0YGX0 51 aa5.2□□□□□ -1.58
SNHG1-215ENST00000540904 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.2□□□□□ -1.58
SNHG1-215ENST00000540904 K7ERJ3 54 aa5.19□□□□□ -1.58
SNHG1-215ENST00000540904 SNCGO76070 127 aa5.19□□□□□ -1.58
SNHG1-215ENST00000540904 FAM218AQ96MZ4 157 aa5.19□□□□□ -1.58
SNHG1-215ENST00000540904 LIMD2Q9BT23 127 aa5.19□□□□□ -1.58
SNHG1-215ENST00000540904 TRIAP1O43715 76 aa5.18□□□□□ -1.58
SNHG1-215ENST00000540904 CD164Q04900 197 aa5.18□□□□□ -1.58
SNHG1-215ENST00000540904 SNHG12Q9BXW3 62 aa5.17□□□□□ -1.58
SNHG1-215ENST00000540904 M0R143 59 aa5.16□□□□□ -1.58
SNHG1-215ENST00000540904 PSMB2P49721 201 aa5.16□□□□□ -1.58
SNHG1-215ENST00000540904 KRTAP13-3Q3SY46 172 aa5.16□□□□□ -1.58
SNHG1-215ENST00000540904 PPDPFLQ8WWR9 84 aa5.16□□□□□ -1.58
SNHG1-215ENST00000540904 OCIAD2Q56VL3 154 aa5.15□□□□□ -1.59
SNHG1-215ENST00000540904 CLEC2BQ92478 149 aa5.15□□□□□ -1.59
SNHG1-215ENST00000540904 IGLV8-61A0A075B6I0 122 aa5.14□□□□□ -1.59
SNHG1-215ENST00000540904 A0A1B0GX51 115 aa5.14□□□□□ -1.59
SNHG1-215ENST00000540904 H3BUT2 72 aa5.14□□□□□ -1.59
SNHG1-215ENST00000540904 Q6JHZ5 121 aa5.14□□□□□ -1.59
SNHG1-215ENST00000540904 IGFL1Q6UW32 110 aa5.14□□□□□ -1.59
SNHG1-215ENST00000540904 RNF213Q63HN8 5207 aa5.13□□□□□ -1.59
SNHG1-215ENST00000540904 COX6CP09669 75 aa5.13□□□□□ -1.59
SNHG1-215ENST00000540904 Q5XG85 94 aa5.13□□□□□ -1.59
SNHG1-215ENST00000540904 FABP2P12104 132 aa5.12□□□□□ -1.59
SNHG1-215ENST00000540904 NDUFV3P56181 108 aaKnown RBP5.12□□□□□ -1.59
SNHG1-215ENST00000540904 LCE5AQ5TCM9 118 aa5.12□□□□□ -1.59
SNHG1-215ENST00000540904 TCL1BO95988 128 aa5.11□□□□□ -1.59
SNHG1-215ENST00000540904 DNAL4O96015 105 aa5.11□□□□□ -1.59
SNHG1-215ENST00000540904 C1orf195Q5TG92 126 aa5.11□□□□□ -1.59
SNHG1-215ENST00000540904 TRBV7-7A0A0K0K1E9 115 aa5.1□□□□□ -1.59
SNHG1-215ENST00000540904 SCGB1C2P0DMR2 95 aa5.1□□□□□ -1.59
SNHG1-215ENST00000540904 C9orf92A6NGG3 77 aa5.09□□□□□ -1.59
SNHG1-215ENST00000540904 H3BMG7 143 aa5.09□□□□□ -1.59
SNHG1-215ENST00000540904 BATFQ16520 125 aa5.09□□□□□ -1.59
SNHG1-215ENST00000540904 COL5A1-AS1Q5SY13 56 aa5.09□□□□□ -1.59
SNHG1-215ENST00000540904 ORMDL1Q9P0S3 153 aa5.09□□□□□ -1.59
SNHG1-215ENST00000540904 A0A1B0GV72 72 aa5.07□□□□□ -1.6
SNHG1-215ENST00000540904 H3BQ85 93 aa5.06□□□□□ -1.6
SNHG1-215ENST00000540904 TMEM256-PLSCR3K7ERE1 68 aa5.06□□□□□ -1.6
SNHG1-215ENST00000540904 SEC61BP60468 96 aaKnown RBP5.06□□□□□ -1.6
SNHG1-215ENST00000540904 ASB16-AS1Q495Z4 193 aa5.06□□□□□ -1.6
SNHG1-215ENST00000540904 NAA38Q9BRA0 125 aaKnown RBP5.06□□□□□ -1.6
SNHG1-215ENST00000540904 LST1O00453 97 aa5.05□□□□□ -1.6
SNHG1-215ENST00000540904 TRACP01848 142 aa5.05□□□□□ -1.6
SNHG1-215ENST00000540904 Q6Q795 121 aa5.05□□□□□ -1.6
SNHG1-215ENST00000540904 TEN1Q86WV5 123 aa5.05□□□□□ -1.6
SNHG1-215ENST00000540904 A0A1B0GV90 55 aa5.04□□□□□ -1.6
SNHG1-215ENST00000540904 A0A087WSZ3 146 aa5.03□□□□□ -1.6
SNHG1-215ENST00000540904 A0A0U1RQV1 116 aa5.03□□□□□ -1.6
SNHG1-215ENST00000540904 ANKRD29Q8N6D5 301 aa5.03□□□□□ -1.6
SNHG1-215ENST00000540904 SS18L2Q9UHA2 77 aa5.03□□□□□ -1.6
SNHG1-215ENST00000540904 MUC2Q02817 5179 aa5.03□□□□□ -1.6
SNHG1-215ENST00000540904 A0A1W2PNM2 257 aa5.02□□□□□ -1.61
SNHG1-215ENST00000540904 UBE2V1Q13404 147 aa5.02□□□□□ -1.61
SNHG1-215ENST00000540904 BAALC-AS2P0C853 105 aa5.01□□□□□ -1.61
SNHG1-215ENST00000540904 KRTAP9-3Q9BYQ3 159 aa5.01□□□□□ -1.61
SNHG1-215ENST00000540904 ATXN8Q156A1 80 aa5□□□□□ -1.61
SNHG1-215ENST00000540904 TRBV7-4A0A0J9YYF1 115 aa4.99□□□□□ -1.61
SNHG1-215ENST00000540904 CCKP06307 115 aa4.99□□□□□ -1.61
SNHG1-215ENST00000540904 PCOTHQ58A44 107 aa4.99□□□□□ -1.61
SNHG1-215ENST00000540904 KRTAP4-1Q9BYQ7 146 aa4.99□□□□□ -1.61
SNHG1-215ENST00000540904 RBM3P98179 157 aaKnown RBP4.98□□□□□ -1.61
SNHG1-215ENST00000540904 LYRM7Q5U5X0 104 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms