RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 IGKV2-24A0A0C4DH68 120 aa8.39□□□□□ -1.07
PABPC1-208ENST00000519004 RTL8CO15255 209 aa8.39□□□□□ -1.07
PABPC1-208ENST00000519004 Q6ZR54 194 aa8.38□□□□□ -1.07
PABPC1-208ENST00000519004 ZNF469Q96JG9 3925 aaPredicted RBP8.37□□□□□ -1.07
PABPC1-208ENST00000519004 H0Y9J4 135 aa8.37□□□□□ -1.07
PABPC1-208ENST00000519004 DOPEY1Q5JWR5 2465 aa8.36□□□□□ -1.07
PABPC1-208ENST00000519004 OXLD1Q5BKU9 147 aa8.35□□□□□ -1.07
PABPC1-208ENST00000519004 TP53AIP1Q9HCN2 124 aa8.35□□□□□ -1.07
PABPC1-208ENST00000519004 CHD8Q9HCK8 2581 aa8.34□□□□□ -1.07
PABPC1-208ENST00000519004 DEFB131BA0A096LNP1 70 aa8.34□□□□□ -1.07
PABPC1-208ENST00000519004 PRLHP81277 87 aa8.34□□□□□ -1.07
PABPC1-208ENST00000519004 A0A087X002 238 aa8.33□□□□□ -1.08
PABPC1-208ENST00000519004 FLNCQ14315 2725 aa8.32□□□□□ -1.08
PABPC1-208ENST00000519004 SPTBN4Q9H254 2564 aa8.31□□□□□ -1.08
PABPC1-208ENST00000519004 HIVEP2P31629 2446 aa8.31□□□□□ -1.08
PABPC1-208ENST00000519004 F8P00451 2351 aa8.31□□□□□ -1.08
PABPC1-208ENST00000519004 ALMS1Q8TCU4 4167 aa8.3□□□□□ -1.08
PABPC1-208ENST00000519004 LINC01556Q5JQF7 62 aa8.3□□□□□ -1.08
PABPC1-208ENST00000519004 KRTAP10-9P60411 292 aa8.29□□□□□ -1.08
PABPC1-208ENST00000519004 H3BNG1 76 aa8.28□□□□□ -1.08
PABPC1-208ENST00000519004 SPATA8Q6RVD6 105 aa8.28□□□□□ -1.08
PABPC1-208ENST00000519004 TENM2Q9NT68 2774 aa8.27□□□□□ -1.09
PABPC1-208ENST00000519004 UNC79Q9P2D8 2635 aa8.27□□□□□ -1.09
PABPC1-208ENST00000519004 KRTAP10-3P60369 221 aa8.27□□□□□ -1.09
PABPC1-208ENST00000519004 CASC10Q5T4H9 136 aa8.27□□□□□ -1.09
PABPC1-208ENST00000519004 DEFB113Q30KQ7 82 aa8.25□□□□□ -1.09
PABPC1-208ENST00000519004 CSAG1Q6PB30 78 aa8.25□□□□□ -1.09
PABPC1-208ENST00000519004 KRTAP1-3Q8IUG1 177 aa8.25□□□□□ -1.09
PABPC1-208ENST00000519004 C8orf17Q9NRJ1 99 aa8.25□□□□□ -1.09
PABPC1-208ENST00000519004 RETNLBQ9BQ08 111 aa8.25□□□□□ -1.09
PABPC1-208ENST00000519004 SPRR1BP22528 89 aa8.24□□□□□ -1.09
PABPC1-208ENST00000519004 Q96NJ1 140 aa8.24□□□□□ -1.09
PABPC1-208ENST00000519004 PKD1L2Q7Z442 2459 aa8.22□□□□□ -1.09
PABPC1-208ENST00000519004 CENPEQ02224 2701 aa8.21□□□□□ -1.09
PABPC1-208ENST00000519004 HIVEP1P15822 2718 aa8.21□□□□□ -1.09
PABPC1-208ENST00000519004 DNAH1Q9P2D7 4330 aa8.21□□□□□ -1.1
PABPC1-208ENST00000519004 CCDC168Q8NDH2 2452 aa8.21□□□□□ -1.1
PABPC1-208ENST00000519004 A0A096LNI7 61 aa8.19□□□□□ -1.1
PABPC1-208ENST00000519004 MTORP42345 2549 aa8.18□□□□□ -1.1
PABPC1-208ENST00000519004 A0A1B0GU69 56 aa8.18□□□□□ -1.1
PABPC1-208ENST00000519004 VWFP04275 2813 aa8.18□□□□□ -1.1
PABPC1-208ENST00000519004 K7EIL1 84 aa8.18□□□□□ -1.1
PABPC1-208ENST00000519004 DNAH10OSP0CZ25 163 aa8.17□□□□□ -1.1
PABPC1-208ENST00000519004 ACYP2P14621 99 aa8.17□□□□□ -1.1
PABPC1-208ENST00000519004 MIR22HGQ0VDD5 57 aa8.17□□□□□ -1.1
PABPC1-208ENST00000519004 MRPL34Q9BQ48 92 aaKnown RBP8.17□□□□□ -1.1
PABPC1-208ENST00000519004 ABCA12Q86UK0 2595 aa8.16□□□□□ -1.1
PABPC1-208ENST00000519004 ITPR3Q14573 2671 aa8.16□□□□□ -1.1
PABPC1-208ENST00000519004 TRRAPQ9Y4A5 3859 aa8.15□□□□□ -1.1
PABPC1-208ENST00000519004 IGHV6-1A0A0B4J1U7 121 aa8.15□□□□□ -1.1
PABPC1-208ENST00000519004 KRTAP11-1Q8IUC1 163 aa8.15□□□□□ -1.1
PABPC1-208ENST00000519004 CSMD3Q7Z407 3707 aa8.15□□□□□ -1.1
PABPC1-208ENST00000519004 A0A1B0GVX0 72 aa8.14□□□□□ -1.11
PABPC1-208ENST00000519004 ACACBO00763 2458 aa8.14□□□□□ -1.11
PABPC1-208ENST00000519004 PKD1L1Q8TDX9 2849 aa8.14□□□□□ -1.11
PABPC1-208ENST00000519004 SRRM2Q9UQ35 2752 aaKnown RBP8.14□□□□□ -1.11
PABPC1-208ENST00000519004 KRTAP13-3Q3SY46 172 aa8.12□□□□□ -1.11
PABPC1-208ENST00000519004 UQCR11O14957 56 aa8.11□□□□□ -1.11
PABPC1-208ENST00000519004 Q5W150 140 aa8.11□□□□□ -1.11
PABPC1-208ENST00000519004 NOTCH2NLQ7Z3S9 236 aa8.11□□□□□ -1.11
PABPC1-208ENST00000519004 DMAC1Q96GE9 116 aa8.1□□□□□ -1.11
PABPC1-208ENST00000519004 UBR5O95071 2799 aaPredicted RBP8.1□□□□□ -1.11
PABPC1-208ENST00000519004 KRTAP1-1Q07627 177 aa8.09□□□□□ -1.11
PABPC1-208ENST00000519004 ZNF861PO60384 105 aa8.09□□□□□ -1.11
PABPC1-208ENST00000519004 MYO18BQ8IUG5 2567 aa8.09□□□□□ -1.12
PABPC1-208ENST00000519004 FAM208BQ5VWN6 2430 aa8.09□□□□□ -1.12
PABPC1-208ENST00000519004 BAHCC1Q9P281 2608 aa8.09□□□□□ -1.12
PABPC1-208ENST00000519004 C1orf134Q5TEV5 83 aa8.08□□□□□ -1.12
PABPC1-208ENST00000519004 FLNAP21333 2647 aaKnown RBP8.07□□□□□ -1.12
PABPC1-208ENST00000519004 ZNF706Q9Y5V0 76 aaPredicted RBP8.04□□□□□ -1.12
PABPC1-208ENST00000519004 CDK2AP2O75956 126 aa8.03□□□□□ -1.12
PABPC1-208ENST00000519004 PIEZO1Q92508 2521 aa8.03□□□□□ -1.12
PABPC1-208ENST00000519004 IGLV9-49A0A0B4J1Y8 123 aa8.02□□□□□ -1.13
PABPC1-208ENST00000519004 CHTF8P0CG12 524 aa8.02□□□□□ -1.13
PABPC1-208ENST00000519004 ROMO1P60602 79 aa7.99□□□□□ -1.13
PABPC1-208ENST00000519004 IGSF10Q6WRI0 2623 aa7.98□□□□□ -1.13
PABPC1-208ENST00000519004 KRTAP13-1Q8IUC0 172 aa7.98□□□□□ -1.13
PABPC1-208ENST00000519004 DNAH10Q8IVF4 4471 aa7.98□□□□□ -1.13
PABPC1-208ENST00000519004 ACANP16112 2415 aa7.96□□□□□ -1.13
PABPC1-208ENST00000519004 KRTAP25-1Q3LHN0 102 aa7.94□□□□□ -1.14
PABPC1-208ENST00000519004 CACNA1AO00555 2505 aa7.93□□□□□ -1.14
PABPC1-208ENST00000519004 ANK2Q01484 3957 aa7.92□□□□□ -1.14
PABPC1-208ENST00000519004 TENM3Q9P273 2699 aa7.92□□□□□ -1.14
PABPC1-208ENST00000519004 IGLV7-43P04211 117 aa7.91□□□□□ -1.14
PABPC1-208ENST00000519004 FBN1P35555 2871 aaKnown RBP7.91□□□□□ -1.14
PABPC1-208ENST00000519004 LINC00483Q53H64 154 aa7.9□□□□□ -1.15
PABPC1-208ENST00000519004 TENM1Q9UKZ4 2725 aa7.87□□□□□ -1.15
PABPC1-208ENST00000519004 LYSTQ99698 3801 aa7.87□□□□□ -1.15
PABPC1-208ENST00000519004 A8MUU9 505 aa7.86□□□□□ -1.15
PABPC1-208ENST00000519004 IGKV2-30P06310 120 aa7.86□□□□□ -1.15
PABPC1-208ENST00000519004 WWC2-AS2Q96NR7 200 aa7.86□□□□□ -1.15
PABPC1-208ENST00000519004 ZNF462Q96JM2 2506 aa7.85□□□□□ -1.15
PABPC1-208ENST00000519004 SPINK6Q6UWN8 80 aa7.85□□□□□ -1.15
PABPC1-208ENST00000519004 TEP1Q99973 2627 aaKnown RBP7.85□□□□□ -1.15
PABPC1-208ENST00000519004 IGLV5-52A0A0A0MRZ9 124 aa7.84□□□□□ -1.15
PABPC1-208ENST00000519004 PDZD2O15018 2839 aa7.84□□□□□ -1.15
PABPC1-208ENST00000519004 KRTAP1-5Q9BYS1 174 aa7.83□□□□□ -1.16
PABPC1-208ENST00000519004 KRTAP10-11P60412 298 aa7.82□□□□□ -1.16
PABPC1-208ENST00000519004 P0C880 135 aa7.82□□□□□ -1.16
PABPC1-208ENST00000519004 SMR3AQ99954 134 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms