RNA–Protein interactions for RNA: ENST00000513450.1

RNF4-219, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 416 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-219ENST00000513450 COX6B2Q6YFQ2 88 aa0.29□□□□□ -2.36
RNF4-219ENST00000513450 ABCA2Q9BZC7 2435 aa0.29□□□□□ -2.36
RNF4-219ENST00000513450 NCOR2Q9Y618 2525 aa0.29□□□□□ -2.36
RNF4-219ENST00000513450 TENM3Q9P273 2699 aa0.29□□□□□ -2.36
RNF4-219ENST00000513450 TNXBP22105 4242 aa0.28□□□□□ -2.36
RNF4-219ENST00000513450 MAST1Q9Y2H9 1570 aa0.28□□□□□ -2.36
RNF4-219ENST00000513450 MACF1Q9UPN3 7388 aaKnown RBP0.28□□□□□ -2.36
RNF4-219ENST00000513450 IGIPA6NJ69 53 aa0.28□□□□□ -2.36
RNF4-219ENST00000513450 DEFB114Q30KQ6 69 aa0.28□□□□□ -2.36
RNF4-219ENST00000513450 NCBP2-AS2Q69YL0 99 aa0.28□□□□□ -2.36
RNF4-219ENST00000513450 SPINK6Q6UWN8 80 aa0.28□□□□□ -2.36
RNF4-219ENST00000513450 ANKHD1Q8IWZ3 2542 aaKnown RBP0.28□□□□□ -2.36
RNF4-219ENST00000513450 EPG5Q9HCE0 2579 aa0.28□□□□□ -2.37
RNF4-219ENST00000513450 HECTD1Q9ULT8 2610 aa0.28□□□□□ -2.37
RNF4-219ENST00000513450 UBR4Q5T4S7 5183 aa0.28□□□□□ -2.37
RNF4-219ENST00000513450 AGLP35573 1532 aa0.28□□□□□ -2.37
RNF4-219ENST00000513450 PDE4DIPQ5VU43 2346 aa0.27□□□□□ -2.37
RNF4-219ENST00000513450 HUWE1Q7Z6Z7 4374 aaKnown RBP0.27□□□□□ -2.37
RNF4-219ENST00000513450 PTPN13Q12923 2485 aa0.27□□□□□ -2.37
RNF4-219ENST00000513450 ITPR3Q14573 2671 aa0.27□□□□□ -2.37
RNF4-219ENST00000513450 TENM4Q6N022 2769 aa0.27□□□□□ -2.37
RNF4-219ENST00000513450 LRP1Q07954 4544 aaKnown RBP0.27□□□□□ -2.37
RNF4-219ENST00000513450 LYNX1G3V0Z9 82 aa0.27□□□□□ -2.37
RNF4-219ENST00000513450 DEFB130BP0DP73 79 aa0.27□□□□□ -2.37
RNF4-219ENST00000513450 DEFB130AP0DP74 79 aa0.27□□□□□ -2.37
RNF4-219ENST00000513450 DOPEY1Q5JWR5 2465 aa0.27□□□□□ -2.37
RNF4-219ENST00000513450 MYO9AB2RTY4 2548 aa0.27□□□□□ -2.37
RNF4-219ENST00000513450 COL6A5A8TX70 2615 aa0.27□□□□□ -2.37
RNF4-219ENST00000513450 CROCC2H7BZ55 1655 aa0.27□□□□□ -2.37
RNF4-219ENST00000513450 DSPP15924 2871 aaKnown RBP0.27□□□□□ -2.37
RNF4-219ENST00000513450 ANKRD36CQ5JPF3 1778 aa0.27□□□□□ -2.37
RNF4-219ENST00000513450 SPTA1P02549 2419 aa0.26□□□□□ -2.37
RNF4-219ENST00000513450 MAP1BP46821 2468 aaKnown RBP0.26□□□□□ -2.37
RNF4-219ENST00000513450 MAST4O15021 2626 aa0.26□□□□□ -2.37
RNF4-219ENST00000513450 OTOGQ6ZRI0 2925 aa0.26□□□□□ -2.37
RNF4-219ENST00000513450 PRM1P04553 51 aa0.26□□□□□ -2.37
RNF4-219ENST00000513450 KMT2AQ03164 3969 aa0.26□□□□□ -2.37
RNF4-219ENST00000513450 FANCD2Q9BXW9 1451 aa0.26□□□□□ -2.37
RNF4-219ENST00000513450 TOGARAM1Q9Y4F4 1720 aa0.26□□□□□ -2.37
RNF4-219ENST00000513450 VPS13BQ7Z7G8 4022 aa0.25□□□□□ -2.37
RNF4-219ENST00000513450 CHD8Q9HCK8 2581 aa0.25□□□□□ -2.37
RNF4-219ENST00000513450 KIAA1109Q2LD37 5005 aa0.25□□□□□ -2.37
RNF4-219ENST00000513450 DEPDC5O75140 1603 aa0.25□□□□□ -2.37
RNF4-219ENST00000513450 SYCP2Q9BX26 1530 aa0.25□□□□□ -2.37
RNF4-219ENST00000513450 SPINK4O60575 86 aa0.25□□□□□ -2.37
RNF4-219ENST00000513450 MRPL33O75394 65 aaKnown RBP0.25□□□□□ -2.37
RNF4-219ENST00000513450 IAPPP10997 89 aa0.25□□□□□ -2.37
RNF4-219ENST00000513450 MUC5ACP98088 5654 aa0.25□□□□□ -2.37
RNF4-219ENST00000513450 NSD1Q96L73 2696 aaPredicted RBP0.25□□□□□ -2.37
RNF4-219ENST00000513450 MYO18BQ8IUG5 2567 aa0.25□□□□□ -2.37
RNF4-219ENST00000513450 SPTBN4Q9H254 2564 aa0.25□□□□□ -2.37
RNF4-219ENST00000513450 ZFYVE26Q68DK2 2539 aa0.25□□□□□ -2.37
RNF4-219ENST00000513450 CELSR1Q9NYQ6 3014 aa0.24□□□□□ -2.37
RNF4-219ENST00000513450 FAT4Q6V0I7 4981 aa0.24□□□□□ -2.37
RNF4-219ENST00000513450 FASNP49327 2511 aaKnown RBP0.24□□□□□ -2.37
RNF4-219ENST00000513450 PCNX1Q96RV3 2341 aa0.24□□□□□ -2.37
RNF4-219ENST00000513450 PCLOQ9Y6V0 5065 aa0.24□□□□□ -2.37
RNF4-219ENST00000513450 COL6A3P12111 3177 aa0.24□□□□□ -2.37
RNF4-219ENST00000513450 DSTQ03001 7570 aaKnown RBP0.24□□□□□ -2.37
RNF4-219ENST00000513450 PHGR1C9JFL3 82 aa0.24□□□□□ -2.37
RNF4-219ENST00000513450 RPS27P42677 84 aaKnown RBP0.24□□□□□ -2.37
RNF4-219ENST00000513450 RPS27LQ71UM5 84 aaKnown RBP0.24□□□□□ -2.37
RNF4-219ENST00000513450 NMES1Q9C002 83 aa0.24□□□□□ -2.37
RNF4-219ENST00000513450 SYNE1Q8NF91 8797 aaKnown RBP0.24□□□□□ -2.37
RNF4-219ENST00000513450 EFCAB6Q5THR3 1501 aa0.23□□□□□ -2.37
RNF4-219ENST00000513450 ANKRD11Q6UB99 2663 aaPredicted RBP0.23□□□□□ -2.37
RNF4-219ENST00000513450 LRRK2Q5S007 2527 aa0.23□□□□□ -2.37
RNF4-219ENST00000513450 CCDC168Q8NDH2 2452 aa0.23□□□□□ -2.37
RNF4-219ENST00000513450 SPG11Q96JI7 2443 aa0.23□□□□□ -2.37
RNF4-219ENST00000513450 LPAP08519 4548 aa0.23□□□□□ -2.37
RNF4-219ENST00000513450 SPINK1P00995 79 aa0.23□□□□□ -2.37
RNF4-219ENST00000513450 MINOS1Q5TGZ0 78 aa0.23□□□□□ -2.37
RNF4-219ENST00000513450 U3KQA8 63 aa0.23□□□□□ -2.37
RNF4-219ENST00000513450 ITPR1Q14643 2758 aa0.23□□□□□ -2.37
RNF4-219ENST00000513450 MUC2Q02817 5179 aa0.23□□□□□ -2.37
RNF4-219ENST00000513450 RIF1Q5UIP0 2472 aaKnown RBP0.23□□□□□ -2.37
RNF4-219ENST00000513450 MDN1Q9NU22 5596 aa0.23□□□□□ -2.37
RNF4-219ENST00000513450 KIAA0586Q9BVV6 1533 aa0.23□□□□□ -2.37
RNF4-219ENST00000513450 NBEAL2Q6ZNJ1 2754 aa0.23□□□□□ -2.37
RNF4-219ENST00000513450 FLNBO75369 2602 aaKnown RBP0.22□□□□□ -2.37
RNF4-219ENST00000513450 FLNAP21333 2647 aaKnown RBP0.22□□□□□ -2.37
RNF4-219ENST00000513450 A0A1B0GUL6 1792 aa0.22□□□□□ -2.37
RNF4-219ENST00000513450 PKD1L1Q8TDX9 2849 aa0.22□□□□□ -2.37
RNF4-219ENST00000513450 CEP250Q9BV73 2442 aa0.22□□□□□ -2.37
RNF4-219ENST00000513450 SNRPGP15A8MWD9 76 aa0.22□□□□□ -2.37
RNF4-219ENST00000513450 ABCA5Q8WWZ7 1642 aa0.22□□□□□ -2.37
RNF4-219ENST00000513450 NRXN3Q9Y4C0 1643 aa0.22□□□□□ -2.37
RNF4-219ENST00000513450 KMT2DO14686 5537 aa0.22□□□□□ -2.37
RNF4-219ENST00000513450 RYR1P21817 5038 aa0.22□□□□□ -2.37
RNF4-219ENST00000513450 HIVEP3Q5T1R4 2406 aa0.22□□□□□ -2.37
RNF4-219ENST00000513450 SYNE2Q8WXH0 6885 aaKnown RBP0.22□□□□□ -2.37
RNF4-219ENST00000513450 HECTD4Q9Y4D8 3996 aa0.21□□□□□ -2.38
RNF4-219ENST00000513450 WNK1Q9H4A3 2382 aa0.21□□□□□ -2.38
RNF4-219ENST00000513450 CDC42BPAQ5VT25 1732 aa0.21□□□□□ -2.38
RNF4-219ENST00000513450 NEBP20929 6669 aa0.21□□□□□ -2.38
RNF4-219ENST00000513450 MYCBP2O75592 4640 aa0.21□□□□□ -2.38
RNF4-219ENST00000513450 ADCY10Q96PN6 1610 aa0.21□□□□□ -2.38
RNF4-219ENST00000513450 UBR5O95071 2799 aaPredicted RBP0.21□□□□□ -2.38
RNF4-219ENST00000513450 CUBNO60494 3623 aa0.21□□□□□ -2.38
RNF4-219ENST00000513450 LINC00308Q8TCZ7 52 aa0.21□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms