RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 TOMM6Q96B49 74 aa3.29□□□□□ -1.88
SPTA1-209ENST00000498708 OSTCQ9NRP0 149 aa3.29□□□□□ -1.88
SPTA1-209ENST00000498708 C6orf48Q9UBA6 75 aa3.29□□□□□ -1.88
SPTA1-209ENST00000498708 KRTAP1-4P0C5Y4 121 aa3.28□□□□□ -1.88
SPTA1-209ENST00000498708 HBBP68871 147 aa3.28□□□□□ -1.88
SPTA1-209ENST00000498708 RIGQ13278 110 aa3.28□□□□□ -1.88
SPTA1-209ENST00000498708 MRPL51Q4U2R6 128 aaKnown RBP3.28□□□□□ -1.88
SPTA1-209ENST00000498708 C2orf82Q6UX34 121 aa3.28□□□□□ -1.88
SPTA1-209ENST00000498708 LCA10Q71F78 164 aa3.28□□□□□ -1.88
SPTA1-209ENST00000498708 NOTCH2NLQ7Z3S9 236 aa3.28□□□□□ -1.88
SPTA1-209ENST00000498708 KRTAP7-1Q8IUC3 87 aa3.28□□□□□ -1.88
SPTA1-209ENST00000498708 FAM19A2Q8N3H0 131 aa3.28□□□□□ -1.88
SPTA1-209ENST00000498708 MRPL35Q9NZE8 188 aaKnown RBP3.28□□□□□ -1.88
SPTA1-209ENST00000498708 IGLV1-50A0A075B6I6 118 aa3.27□□□□□ -1.89
SPTA1-209ENST00000498708 M0R378 163 aa3.27□□□□□ -1.89
SPTA1-209ENST00000498708 CKS2P33552 79 aa3.27□□□□□ -1.89
SPTA1-209ENST00000498708 HERVK_113P61574 105 aa3.27□□□□□ -1.89
SPTA1-209ENST00000498708 MACF1Q9UPN3 7388 aaKnown RBP3.27□□□□□ -1.89
SPTA1-209ENST00000498708 IGHV3OR16-9A0A0B4J2B5 98 aa3.26□□□□□ -1.89
SPTA1-209ENST00000498708 SMIM27A0A1W2PRY6 76 aa3.26□□□□□ -1.89
SPTA1-209ENST00000498708 ZNF73O43830 326 aaPredicted RBP3.26□□□□□ -1.89
SPTA1-209ENST00000498708 TIMM17BO60830 172 aa3.26□□□□□ -1.89
SPTA1-209ENST00000498708 PSMB2P49721 201 aa3.26□□□□□ -1.89
SPTA1-209ENST00000498708 C9orf129Q5T035 196 aaKnown RBP3.26□□□□□ -1.89
SPTA1-209ENST00000498708 FAM104AQ969W3 186 aa3.26□□□□□ -1.89
SPTA1-209ENST00000498708 TIMM21Q9BVV7 248 aa3.26□□□□□ -1.89
SPTA1-209ENST00000498708 TOMM7Q9P0U1 55 aa3.26□□□□□ -1.89
SPTA1-209ENST00000498708 TP73-AS1Q9UF72 201 aa3.26□□□□□ -1.89
SPTA1-209ENST00000498708 V9GYV3 84 aa3.26□□□□□ -1.89
SPTA1-209ENST00000498708 TRBV10-2A0A0K0K1G8 114 aa3.25□□□□□ -1.89
SPTA1-209ENST00000498708 D6R8Y8 96 aa3.25□□□□□ -1.89
SPTA1-209ENST00000498708 K7ERJ3 54 aa3.25□□□□□ -1.89
SPTA1-209ENST00000498708 LST1O00453 97 aa3.25□□□□□ -1.89
SPTA1-209ENST00000498708 PPP1R17O96001 155 aa3.25□□□□□ -1.89
SPTA1-209ENST00000498708 CCKP06307 115 aa3.25□□□□□ -1.89
SPTA1-209ENST00000498708 TLX1NBP0CAT3 122 aa3.25□□□□□ -1.89
SPTA1-209ENST00000498708 KLKP1Q107X0 134 aa3.25□□□□□ -1.89
SPTA1-209ENST00000498708 KIAA0087Q14695 138 aa3.25□□□□□ -1.89
SPTA1-209ENST00000498708 Q8N8P6 123 aa3.25□□□□□ -1.89
SPTA1-209ENST00000498708 URB1-AS1Q96HZ7 61 aa3.25□□□□□ -1.89
SPTA1-209ENST00000498708 RETNLBQ9BQ08 111 aa3.25□□□□□ -1.89
SPTA1-209ENST00000498708 SMIM2Q9BVW6 85 aa3.25□□□□□ -1.89
SPTA1-209ENST00000498708 KRTAP4-1Q9BYQ7 146 aa3.25□□□□□ -1.89
SPTA1-209ENST00000498708 XAGE1AQ9HD64 81 aa3.25□□□□□ -1.89
SPTA1-209ENST00000498708 ANAPC11Q9NYG5 84 aa3.25□□□□□ -1.89
SPTA1-209ENST00000498708 LOC389332A0A1B0GUA5 103 aa3.24□□□□□ -1.89
SPTA1-209ENST00000498708 A8MUN3 132 aa3.24□□□□□ -1.89
SPTA1-209ENST00000498708 TMEM256-PLSCR3K7ERE1 68 aa3.24□□□□□ -1.89
SPTA1-209ENST00000498708 ZNF861PO60384 105 aa3.24□□□□□ -1.89
SPTA1-209ENST00000498708 IFI27P40305 119 aaPredicted RBP3.24□□□□□ -1.89
SPTA1-209ENST00000498708 CXCL6P80162 114 aa3.24□□□□□ -1.89
SPTA1-209ENST00000498708 ATXN8Q156A1 80 aa3.24□□□□□ -1.89
SPTA1-209ENST00000498708 LINC00242Q5T6M2 205 aa3.24□□□□□ -1.89
SPTA1-209ENST00000498708 Q75L30 129 aa3.24□□□□□ -1.89
SPTA1-209ENST00000498708 TIMM17AQ99595 171 aa3.24□□□□□ -1.89
SPTA1-209ENST00000498708 C22orf24Q9Y442 160 aa3.24□□□□□ -1.89
SPTA1-209ENST00000498708 IGLV4-3A0A075B6K6 122 aa3.23□□□□□ -1.89
SPTA1-209ENST00000498708 A0A087X002 238 aa3.23□□□□□ -1.89
SPTA1-209ENST00000498708 A0A0B4J2C4 111 aa3.23□□□□□ -1.89
SPTA1-209ENST00000498708 TRBV30A0A0K0K1B3 111 aa3.23□□□□□ -1.89
SPTA1-209ENST00000498708 H7BZZ5 65 aa3.23□□□□□ -1.89
SPTA1-209ENST00000498708 PRSS2P07478 247 aa3.23□□□□□ -1.89
SPTA1-209ENST00000498708 PAPPA-AS1Q5QFB9 102 aa3.23□□□□□ -1.89
SPTA1-209ENST00000498708 DAND5Q8N907 189 aa3.23□□□□□ -1.89
SPTA1-209ENST00000498708 TYMSOSQ8TAI1 123 aa3.23□□□□□ -1.89
SPTA1-209ENST00000498708 TRAV13-2A0A0B4J235 113 aa3.22□□□□□ -1.89
SPTA1-209ENST00000498708 RPL37AP8A6NKH3 93 aa3.22□□□□□ -1.89
SPTA1-209ENST00000498708 PSPHP1O15172 72 aa3.22□□□□□ -1.89
SPTA1-209ENST00000498708 MP68P56378 58 aa3.22□□□□□ -1.89
SPTA1-209ENST00000498708 Q1T7F1 81 aa3.22□□□□□ -1.89
SPTA1-209ENST00000498708 ATP5EP2Q5VTU8 51 aa3.22□□□□□ -1.89
SPTA1-209ENST00000498708 C7orf65Q6ZTY9 151 aa3.22□□□□□ -1.89
SPTA1-209ENST00000498708 NKAPP1Q8N9T2 125 aa3.22□□□□□ -1.89
SPTA1-209ENST00000498708 TMEM141Q96I45 108 aa3.22□□□□□ -1.89
SPTA1-209ENST00000498708 CYSTM1Q9H1C7 97 aa3.22□□□□□ -1.89
SPTA1-209ENST00000498708 FLGP20930 4061 aaPredicted RBP3.22□□□□□ -1.89
SPTA1-209ENST00000498708 Q6JHZ5 121 aa3.21□□□□□ -1.9
SPTA1-209ENST00000498708 RPL28P46779 137 aaKnown RBP3.2□□□□□ -1.9
SPTA1-209ENST00000498708 UBE2AP49459 152 aa3.2□□□□□ -1.9
SPTA1-209ENST00000498708 MT1HP80294 61 aa3.2□□□□□ -1.9
SPTA1-209ENST00000498708 ASB16-AS1Q495Z4 193 aa3.2□□□□□ -1.9
SPTA1-209ENST00000498708 KRTAP13-2Q52LG2 175 aa3.2□□□□□ -1.9
SPTA1-209ENST00000498708 C2orf66Q6UXQ4 117 aa3.2□□□□□ -1.9
SPTA1-209ENST00000498708 ATP11AUNQ6ZP68 121 aa3.2□□□□□ -1.9
SPTA1-209ENST00000498708 LINC00173Q6ZV60 143 aa3.2□□□□□ -1.9
SPTA1-209ENST00000498708 ORMDL3Q8N138 153 aa3.2□□□□□ -1.9
SPTA1-209ENST00000498708 LINC00167Q96N53 147 aa3.2□□□□□ -1.9
SPTA1-209ENST00000498708 HIST1H4GQ99525 98 aa3.2□□□□□ -1.9
SPTA1-209ENST00000498708 LOC107984156A0A0G2JMH3 177 aa3.19□□□□□ -1.9
SPTA1-209ENST00000498708 TRBV10-3A0A0K0K1G6 114 aa3.19□□□□□ -1.9
SPTA1-209ENST00000498708 LINC01549A6NIU2 74 aa3.19□□□□□ -1.9
SPTA1-209ENST00000498708 FAM19A3Q7Z5A8 133 aa3.19□□□□□ -1.9
SPTA1-209ENST00000498708 ARL17AQ8IVW1 177 aa3.19□□□□□ -1.9
SPTA1-209ENST00000498708 Q8IZM0 81 aa3.19□□□□□ -1.9
SPTA1-209ENST00000498708 CDKN2A-AS1Q9UH64 79 aa3.19□□□□□ -1.9
SPTA1-209ENST00000498708 IGLV7-46A0A075B6I9 117 aa3.18□□□□□ -1.9
SPTA1-209ENST00000498708 IGKV2-28A0A075B6P5 120 aa3.18□□□□□ -1.9
SPTA1-209ENST00000498708 TEX49A0A1B0GTD5 131 aa3.18□□□□□ -1.9
SPTA1-209ENST00000498708 F8VRH5 84 aa3.18□□□□□ -1.9
SPTA1-209ENST00000498708 IGKV2D-28P01615 120 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms