RNA–Protein interactions for RNA: ENST00000487558.1

CUL3-211, Transcript of cullin 3, humanhuman

TSL 2

Gene CUL3, Length 1,093 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-211ENST00000487558 H0YGX0 51 aa0.87□□□□□ -2.27
CUL3-211ENST00000487558 MINOS1Q5TGZ0 78 aa0.87□□□□□ -2.27
CUL3-211ENST00000487558 SMR3AQ99954 134 aa0.87□□□□□ -2.27
CUL3-211ENST00000487558 CSPG4Q6UVK1 2322 aa0.87□□□□□ -2.27
CUL3-211ENST00000487558 APCP25054 2843 aa0.86□□□□□ -2.27
CUL3-211ENST00000487558 IAPPP10997 89 aa0.86□□□□□ -2.27
CUL3-211ENST00000487558 TMEM167BQ9NRX6 74 aa0.86□□□□□ -2.27
CUL3-211ENST00000487558 NCOR1O75376 2440 aa0.86□□□□□ -2.27
CUL3-211ENST00000487558 ABCA2Q9BZC7 2435 aa0.86□□□□□ -2.27
CUL3-211ENST00000487558 REV3LO60673 3130 aa0.86□□□□□ -2.27
CUL3-211ENST00000487558 IGF2RP11717 2491 aa0.86□□□□□ -2.27
CUL3-211ENST00000487558 FAM208AQ9UK61 1670 aaKnown RBP0.85□□□□□ -2.27
CUL3-211ENST00000487558 FRAS1Q86XX4 4008 aa0.85□□□□□ -2.27
CUL3-211ENST00000487558 ATRQ13535 2644 aa0.84□□□□□ -2.27
CUL3-211ENST00000487558 VWFP04275 2813 aa0.83□□□□□ -2.28
CUL3-211ENST00000487558 MUC5BQ9HC84 5762 aaPredicted RBP0.83□□□□□ -2.28
CUL3-211ENST00000487558 SPINK1P00995 79 aa0.83□□□□□ -2.28
CUL3-211ENST00000487558 C6orf48Q9UBA6 75 aa0.83□□□□□ -2.28
CUL3-211ENST00000487558 LMO7Q8WWI1 1683 aa0.83□□□□□ -2.28
CUL3-211ENST00000487558 TRANK1O15050 2925 aa0.83□□□□□ -2.28
CUL3-211ENST00000487558 CHD6Q8TD26 2715 aa0.83□□□□□ -2.28
CUL3-211ENST00000487558 TOMM5Q8N4H5 51 aa0.82□□□□□ -2.28
CUL3-211ENST00000487558 IQGAP1P46940 1657 aa0.81□□□□□ -2.28
CUL3-211ENST00000487558 LOC730098B7Z3J9 87 aa0.81□□□□□ -2.28
CUL3-211ENST00000487558 DEFB130BP0DP73 79 aa0.81□□□□□ -2.28
CUL3-211ENST00000487558 DEFB130AP0DP74 79 aa0.81□□□□□ -2.28
CUL3-211ENST00000487558 ABRACLQ9P1F3 81 aa0.81□□□□□ -2.28
CUL3-211ENST00000487558 ALMS1Q8TCU4 4167 aa0.8□□□□□ -2.28
CUL3-211ENST00000487558 UBR4Q5T4S7 5183 aa0.79□□□□□ -2.28
CUL3-211ENST00000487558 ZFYVE26Q68DK2 2539 aa0.79□□□□□ -2.28
CUL3-211ENST00000487558 SMIM27A0A1W2PRY6 76 aa0.79□□□□□ -2.28
CUL3-211ENST00000487558 KRTAP2-3P0C7H8 128 aa0.79□□□□□ -2.28
CUL3-211ENST00000487558 LINC00308Q8TCZ7 52 aa0.79□□□□□ -2.28
CUL3-211ENST00000487558 KRTAP2-4Q9BYR9 128 aa0.79□□□□□ -2.28
CUL3-211ENST00000487558 KRTAP2-1Q9BYU5 128 aa0.79□□□□□ -2.28
CUL3-211ENST00000487558 DSPP15924 2871 aaKnown RBP0.79□□□□□ -2.28
CUL3-211ENST00000487558 ANK2Q01484 3957 aa0.78□□□□□ -2.28
CUL3-211ENST00000487558 TENM4Q6N022 2769 aa0.78□□□□□ -2.28
CUL3-211ENST00000487558 TOP2AP11388 1531 aaKnown RBP0.78□□□□□ -2.28
CUL3-211ENST00000487558 CHD8Q9HCK8 2581 aa0.77□□□□□ -2.29
CUL3-211ENST00000487558 LINC01546A6NGU7 62 aa0.77□□□□□ -2.29
CUL3-211ENST00000487558 KRTAP21-1Q3LI58 79 aa0.77□□□□□ -2.29
CUL3-211ENST00000487558 CSMD3Q7Z407 3707 aa0.77□□□□□ -2.29
CUL3-211ENST00000487558 PTPN13Q12923 2485 aa0.76□□□□□ -2.29
CUL3-211ENST00000487558 RPS27P42677 84 aaKnown RBP0.76□□□□□ -2.29
CUL3-211ENST00000487558 RPS27LQ71UM5 84 aaKnown RBP0.76□□□□□ -2.29
CUL3-211ENST00000487558 TIMM8BQ9Y5J9 83 aaPredicted RBP0.76□□□□□ -2.29
CUL3-211ENST00000487558 U3KQA8 63 aa0.76□□□□□ -2.29
CUL3-211ENST00000487558 OTOGQ6ZRI0 2925 aa0.75□□□□□ -2.29
CUL3-211ENST00000487558 CEP290O15078 2479 aa0.75□□□□□ -2.29
CUL3-211ENST00000487558 H3BUA1 57 aa0.74□□□□□ -2.29
CUL3-211ENST00000487558 WT1-ASQ06250 92 aa0.74□□□□□ -2.29
CUL3-211ENST00000487558 NAV2Q8IVL1 2488 aa0.74□□□□□ -2.29
CUL3-211ENST00000487558 PCNX1Q96RV3 2341 aa0.73□□□□□ -2.29
CUL3-211ENST00000487558 PCLOQ9Y6V0 5065 aa0.73□□□□□ -2.29
CUL3-211ENST00000487558 H0YGG7 62 aa0.73□□□□□ -2.29
CUL3-211ENST00000487558 CREBBPQ92793 2442 aa0.73□□□□□ -2.29
CUL3-211ENST00000487558 DEFB135Q30KP9 77 aa0.72□□□□□ -2.29
CUL3-211ENST00000487558 AHNAKQ09666 5890 aaKnown RBP0.72□□□□□ -2.29
CUL3-211ENST00000487558 NBASA2RRP1 2371 aa0.71□□□□□ -2.3
CUL3-211ENST00000487558 KIF21BO75037 1637 aa0.71□□□□□ -2.3
CUL3-211ENST00000487558 M0R2T5 61 aa0.71□□□□□ -2.3
CUL3-211ENST00000487558 EP300Q09472 2414 aaPredicted RBP0.71□□□□□ -2.3
CUL3-211ENST00000487558 HECTD1Q9ULT8 2610 aa0.7□□□□□ -2.3
CUL3-211ENST00000487558 PKD1L1Q8TDX9 2849 aa0.7□□□□□ -2.3
CUL3-211ENST00000487558 WNK1Q9H4A3 2382 aa0.7□□□□□ -2.3
CUL3-211ENST00000487558 DEFB106AQ8N104 65 aa0.7□□□□□ -2.3
CUL3-211ENST00000487558 USP24Q9UPU5 2620 aa0.7□□□□□ -2.3
CUL3-211ENST00000487558 PRRC2CQ9Y520 2896 aaKnown RBP0.7□□□□□ -2.3
CUL3-211ENST00000487558 ATP7AQ04656 1500 aa0.69□□□□□ -2.3
CUL3-211ENST00000487558 S4R3F8 94 aa0.69□□□□□ -2.3
CUL3-211ENST00000487558 CLTCL1P53675 1640 aa0.68□□□□□ -2.3
CUL3-211ENST00000487558 PRLHP81277 87 aa0.68□□□□□ -2.3
CUL3-211ENST00000487558 SMIM2Q9BVW6 85 aa0.68□□□□□ -2.3
CUL3-211ENST00000487558 UBR5O95071 2799 aaPredicted RBP0.68□□□□□ -2.3
CUL3-211ENST00000487558 MAP1BP46821 2468 aaKnown RBP0.67□□□□□ -2.3
CUL3-211ENST00000487558 PKD1L2Q7Z442 2459 aa0.67□□□□□ -2.3
CUL3-211ENST00000487558 AKAP13Q12802 2813 aa0.67□□□□□ -2.3
CUL3-211ENST00000487558 CACNA1AO00555 2505 aa0.67□□□□□ -2.3
CUL3-211ENST00000487558 APC2O95996 2303 aa0.67□□□□□ -2.3
CUL3-211ENST00000487558 NFAT5O94916 1531 aa0.67□□□□□ -2.3
CUL3-211ENST00000487558 BSNQ9UPA5 3926 aa0.66□□□□□ -2.3
CUL3-211ENST00000487558 HIVEP3Q5T1R4 2406 aa0.66□□□□□ -2.3
CUL3-211ENST00000487558 TFF3Q07654 80 aa0.66□□□□□ -2.3
CUL3-211ENST00000487558 KIAA1109Q2LD37 5005 aa0.66□□□□□ -2.3
CUL3-211ENST00000487558 NCOR2Q9Y618 2525 aa0.66□□□□□ -2.3
CUL3-211ENST00000487558 SAMD9LQ8IVG5 1584 aa0.66□□□□□ -2.3
CUL3-211ENST00000487558 PRKDCP78527 4128 aaKnown RBP0.65□□□□□ -2.31
CUL3-211ENST00000487558 WFDC10BQ8IUB3 73 aa0.65□□□□□ -2.31
CUL3-211ENST00000487558 NOP10Q9NPE3 64 aaKnown RBP0.65□□□□□ -2.31
CUL3-211ENST00000487558 SRCAPQ6ZRS2 3230 aa0.65□□□□□ -2.31
CUL3-211ENST00000487558 TRPM2O94759 1503 aa0.64□□□□□ -2.31
CUL3-211ENST00000487558 KAAG1Q9UBP8 84 aa0.64□□□□□ -2.31
CUL3-211ENST00000487558 MUC2Q02817 5179 aa0.64□□□□□ -2.31
CUL3-211ENST00000487558 IGSF10Q6WRI0 2623 aa0.64□□□□□ -2.31
CUL3-211ENST00000487558 MACF1Q9UPN3 7388 aaKnown RBP0.64□□□□□ -2.31
CUL3-211ENST00000487558 SETXQ7Z333 2677 aaKnown RBP0.63□□□□□ -2.31
CUL3-211ENST00000487558 ACANP16112 2415 aa0.63□□□□□ -2.31
CUL3-211ENST00000487558 TNXBP22105 4242 aa0.62□□□□□ -2.31
CUL3-211ENST00000487558 TNRC18O15417 2968 aaPredicted RBP0.62□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms