RNA–Protein interactions for RNA: ENST00000487558.1

CUL3-211, Transcript of cullin 3, humanhuman

TSL 2

Gene CUL3, Length 1,093 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-211ENST00000487558 AEBP2Q6ZN18 517 aaPredicted RBP30.98■■■□□ 2.55
CUL3-211ENST00000487558 CHIC1Q5VXU3 224 aa29.46■■■□□ 2.31
CUL3-211ENST00000487558 SENP3Q9H4L4 574 aaPredicted RBP26.37■■□□□ 1.81
CUL3-211ENST00000487558 PHF23Q9BUL5 403 aaPredicted RBP26.06■■□□□ 1.76
CUL3-211ENST00000487558 FOXD1Q16676 465 aa24.6■■□□□ 1.53
CUL3-211ENST00000487558 PLPPR3Q6T4P5 718 aa23.54■■□□□ 1.36
CUL3-211ENST00000487558 PPP6R1Q9UPN7 881 aa23.07■■□□□ 1.28
CUL3-211ENST00000487558 ADRA2BP18089 450 aa22.98■■□□□ 1.27
CUL3-211ENST00000487558 MSH5O43196 834 aa22.96■■□□□ 1.27
CUL3-211ENST00000487558 PIAS4Q8N2W9 510 aaPredicted RBP22.95■■□□□ 1.26
CUL3-211ENST00000487558 POTEDQ86YR6 584 aa22.33■■□□□ 1.17
CUL3-211ENST00000487558 MAPK8IP2Q13387 824 aaPredicted RBP21.09■□□□□ 0.97
CUL3-211ENST00000487558 SCAF1Q9H7N4 1312 aaKnown RBP21■□□□□ 0.95
CUL3-211ENST00000487558 DMRT2Q9Y5R5 561 aa20.94■□□□□ 0.94
CUL3-211ENST00000487558 PPP4R3CPQ6ZMV5 832 aa20.65■□□□□ 0.9
CUL3-211ENST00000487558 CNKSR2Q8WXI2 1034 aa20.25■□□□□ 0.83
CUL3-211ENST00000487558 HOXD11P31277 338 aaPredicted RBP20.21■□□□□ 0.83
CUL3-211ENST00000487558 RNF216Q9NWF9 866 aaPredicted RBP20.06■□□□□ 0.8
CUL3-211ENST00000487558 DCAF8L1A6NGE4 600 aa19.99■□□□□ 0.79
CUL3-211ENST00000487558 NCBP3Q53F19 620 aaKnown RBP19.86■□□□□ 0.77
CUL3-211ENST00000487558 CACNB1Q02641 598 aaPredicted RBP19.65■□□□□ 0.74
CUL3-211ENST00000487558 RNF39Q9H2S5 420 aa19.64■□□□□ 0.73
CUL3-211ENST00000487558 NPM3O75607 178 aaKnown RBP19.59■□□□□ 0.73
CUL3-211ENST00000487558 DNAJC5BQ9UF47 199 aa19.53■□□□□ 0.72
CUL3-211ENST00000487558 C1QBPQ07021 282 aaKnown RBP19.33■□□□□ 0.68
CUL3-211ENST00000487558 KCNA4P22459 653 aa19.28■□□□□ 0.68
CUL3-211ENST00000487558 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.2■□□□□ 0.66
CUL3-211ENST00000487558 U3KPZ7 1027 aaPredicted RBP18.85■□□□□ 0.61
CUL3-211ENST00000487558 SLC4A2P04920 1241 aa18.73■□□□□ 0.59
CUL3-211ENST00000487558 SPINK5Q9NQ38 1064 aaPredicted RBP18.55■□□□□ 0.56
CUL3-211ENST00000487558 CAPN15O75808 1086 aa18.47■□□□□ 0.55
CUL3-211ENST00000487558 DSG3P32926 999 aa18.4■□□□□ 0.54
CUL3-211ENST00000487558 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.29■□□□□ 0.52
CUL3-211ENST00000487558 HNRNPUL2Q1KMD3 747 aaKnown RBP18.29■□□□□ 0.52
CUL3-211ENST00000487558 APLP2Q06481 763 aa18.28■□□□□ 0.52
CUL3-211ENST00000487558 SAMD1Q6SPF0 538 aaPredicted RBP18.2■□□□□ 0.5
CUL3-211ENST00000487558 TRHP20396 242 aaPredicted RBP18.19■□□□□ 0.5
CUL3-211ENST00000487558 SLC4A1APQ9BWU0 796 aaKnown RBP18.19■□□□□ 0.5
CUL3-211ENST00000487558 ZNF219Q9P2Y4 722 aaPredicted RBP18.18■□□□□ 0.5
CUL3-211ENST00000487558 MYCNP04198 464 aaPredicted RBP18.1■□□□□ 0.49
CUL3-211ENST00000487558 ABCB7O75027 752 aa18.05■□□□□ 0.48
CUL3-211ENST00000487558 FOXD4L1Q9NU39 408 aa17.95■□□□□ 0.46
CUL3-211ENST00000487558 ZBTB22O15209 634 aa17.75■□□□□ 0.43
CUL3-211ENST00000487558 POLA2Q14181 598 aa17.75■□□□□ 0.43
CUL3-211ENST00000487558 ATF5Q9Y2D1 282 aaPredicted RBP17.71■□□□□ 0.43
CUL3-211ENST00000487558 RBM42Q9BTD8 480 aaKnown RBP17.51■□□□□ 0.39
CUL3-211ENST00000487558 POTEHQ6S545 545 aa17.49■□□□□ 0.39
CUL3-211ENST00000487558 ATXN8OSP0DMR3 200 aa17.43■□□□□ 0.38
CUL3-211ENST00000487558 ZBTB12Q9Y330 459 aaPredicted RBP17.38■□□□□ 0.37
CUL3-211ENST00000487558 OSCARQ8IYS5 282 aa17.16■□□□□ 0.34
CUL3-211ENST00000487558 AKT1S1Q96B36 256 aa17.16■□□□□ 0.34
CUL3-211ENST00000487558 EHMT2Q96KQ7 1210 aa17.15■□□□□ 0.34
CUL3-211ENST00000487558 CHRDL2Q6WN34 429 aa17.13■□□□□ 0.33
CUL3-211ENST00000487558 REM2Q8IYK8 340 aaPredicted RBP17■□□□□ 0.31
CUL3-211ENST00000487558 CSRNP3Q8WYN3 585 aa16.98■□□□□ 0.31
CUL3-211ENST00000487558 FBLN2P98095 1184 aa16.96■□□□□ 0.31
CUL3-211ENST00000487558 MKRN4PQ13434 485 aaPredicted RBP16.92■□□□□ 0.3
CUL3-211ENST00000487558 SPDYE2BA6NHP3 402 aa16.86■□□□□ 0.29
CUL3-211ENST00000487558 SPDYE6P0CI01 402 aa16.86■□□□□ 0.29
CUL3-211ENST00000487558 SPDYE2Q495Y8 402 aa16.86■□□□□ 0.29
CUL3-211ENST00000487558 PITPNM1O00562 1244 aa16.81■□□□□ 0.28
CUL3-211ENST00000487558 PIP4P2Q8N4L2 257 aa16.75■□□□□ 0.27
CUL3-211ENST00000487558 FXR2P51116 673 aaKnown RBP eCLIP16.67■□□□□ 0.26
CUL3-211ENST00000487558 SSUH2Q9Y2M2 353 aa16.67■□□□□ 0.26
CUL3-211ENST00000487558 ZNF692Q9BU19 519 aaPredicted RBP16.66■□□□□ 0.26
CUL3-211ENST00000487558 SPDYE1Q8NFV5 336 aaPredicted RBP16.54■□□□□ 0.24
CUL3-211ENST00000487558 CLEC11AQ9Y240 323 aa16.47■□□□□ 0.23
CUL3-211ENST00000487558 SP7Q8TDD2 431 aaPredicted RBP16.43■□□□□ 0.22
CUL3-211ENST00000487558 PABPN1Q86U42 306 aaKnown RBP eCLIP16.42■□□□□ 0.22
CUL3-211ENST00000487558 HAX1O00165 279 aa16.39■□□□□ 0.21
CUL3-211ENST00000487558 PRKAR2AP13861 404 aaKnown RBP16.35■□□□□ 0.21
CUL3-211ENST00000487558 EVX2Q03828 476 aa16.25■□□□□ 0.19
CUL3-211ENST00000487558 PRR29P0C7W0 189 aa16.24■□□□□ 0.19
CUL3-211ENST00000487558 CHADLQ6NUI6 762 aa16.18■□□□□ 0.18
CUL3-211ENST00000487558 C19orf67A6NJJ6 358 aa16.14■□□□□ 0.17
CUL3-211ENST00000487558 SPDYE4A6NLX3 237 aa16.11■□□□□ 0.17
CUL3-211ENST00000487558 STAG3Q9UJ98 1225 aa15.98■□□□□ 0.15
CUL3-211ENST00000487558 FARP1Q9Y4F1 1045 aaPredicted RBP15.98■□□□□ 0.15
CUL3-211ENST00000487558 CREBZFQ9NS37 354 aa15.89■□□□□ 0.13
CUL3-211ENST00000487558 GABBR2O75899 941 aa15.87■□□□□ 0.13
CUL3-211ENST00000487558 CD44P16070 742 aaKnown RBP15.84■□□□□ 0.13
CUL3-211ENST00000487558 PROM2Q8N271 834 aa15.79■□□□□ 0.12
CUL3-211ENST00000487558 MNX1P50219 401 aaPredicted RBP15.65■□□□□ 0.1
CUL3-211ENST00000487558 CLCN6P51797 869 aa15.64■□□□□ 0.09
CUL3-211ENST00000487558 ZNF579Q8NAF0 562 aaKnown RBP15.63■□□□□ 0.09
CUL3-211ENST00000487558 ZRANB1Q9UGI0 708 aa15.62■□□□□ 0.09
CUL3-211ENST00000487558 NPM1P06748 294 aaKnown RBP eCLIP15.56■□□□□ 0.08
CUL3-211ENST00000487558 POTEIP0CG38 1075 aa15.56■□□□□ 0.08
CUL3-211ENST00000487558 PAK3O75914 559 aaPredicted RBP15.47■□□□□ 0.07
CUL3-211ENST00000487558 PHF12Q96QT6 1004 aa15.42■□□□□ 0.06
CUL3-211ENST00000487558 GALR2O43603 387 aaPredicted RBP15.41■□□□□ 0.06
CUL3-211ENST00000487558 LHX8Q68G74 356 aa15.41■□□□□ 0.06
CUL3-211ENST00000487558 DCBLD2Q96PD2 775 aa15.41■□□□□ 0.06
CUL3-211ENST00000487558 FKBP8Q14318 412 aa15.35■□□□□ 0.05
CUL3-211ENST00000487558 MIER1Q8N108 512 aa15.34■□□□□ 0.05
CUL3-211ENST00000487558 PLEKHG5O94827 1062 aa15.28■□□□□ 0.04
CUL3-211ENST00000487558 TSPYL2Q9H2G4 693 aaPredicted RBP15.27■□□□□ 0.04
CUL3-211ENST00000487558 CCDC61Q9Y6R9 512 aa15.25■□□□□ 0.03
CUL3-211ENST00000487558 MS4A3Q96HJ5 214 aa15.22■□□□□ 0.03
CUL3-211ENST00000487558 PLCD3Q8N3E9 789 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms