RNA–Protein interactions for RNA: ENST00000464316.5

CCNL1-204, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 3,843 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-204ENST00000464316 LINC01554Q52M75 96 aa2.45□□□□□ -2.02
CCNL1-204ENST00000464316 C11orf45Q8TAV5 145 aa2.45□□□□□ -2.02
CCNL1-204ENST00000464316 LINC00472Q9H8W2 130 aa2.45□□□□□ -2.02
CCNL1-204ENST00000464316 KRTAP10-9P60411 292 aa2.44□□□□□ -2.02
CCNL1-204ENST00000464316 CCDC168Q8NDH2 2452 aa2.44□□□□□ -2.02
CCNL1-204ENST00000464316 NCOR2Q9Y618 2525 aa2.44□□□□□ -2.02
CCNL1-204ENST00000464316 IGKV2-24A0A0C4DH68 120 aa2.44□□□□□ -2.02
CCNL1-204ENST00000464316 RETNLBQ9BQ08 111 aa2.44□□□□□ -2.02
CCNL1-204ENST00000464316 EPG5Q9HCE0 2579 aa2.44□□□□□ -2.02
CCNL1-204ENST00000464316 A0A1B0GU69 56 aa2.44□□□□□ -2.02
CCNL1-204ENST00000464316 MAP1AP78559 2803 aaPredicted RBP2.43□□□□□ -2.02
CCNL1-204ENST00000464316 LRRK2Q5S007 2527 aa2.43□□□□□ -2.02
CCNL1-204ENST00000464316 A0A096LNI7 61 aa2.43□□□□□ -2.02
CCNL1-204ENST00000464316 MMP24-AS1A0A0U1RRL7 71 aa2.43□□□□□ -2.02
CCNL1-204ENST00000464316 SPRR1BP22528 89 aa2.43□□□□□ -2.02
CCNL1-204ENST00000464316 SPINK7P58062 85 aa2.43□□□□□ -2.02
CCNL1-204ENST00000464316 LINC00313P59037 77 aa2.43□□□□□ -2.02
CCNL1-204ENST00000464316 ABCA12Q86UK0 2595 aa2.43□□□□□ -2.02
CCNL1-204ENST00000464316 A0A0G2JQZ4 141 aa2.43□□□□□ -2.02
CCNL1-204ENST00000464316 A0A1W2PNN7 141 aa2.43□□□□□ -2.02
CCNL1-204ENST00000464316 MRPL34Q9BQ48 92 aaKnown RBP2.43□□□□□ -2.02
CCNL1-204ENST00000464316 C8orf17Q9NRJ1 99 aa2.43□□□□□ -2.02
CCNL1-204ENST00000464316 CHD6Q8TD26 2715 aa2.43□□□□□ -2.02
CCNL1-204ENST00000464316 POLQO75417 2590 aa2.43□□□□□ -2.02
CCNL1-204ENST00000464316 IGHV6-1A0A0B4J1U7 121 aa2.43□□□□□ -2.02
CCNL1-204ENST00000464316 HRES1P13985 223 aa2.43□□□□□ -2.02
CCNL1-204ENST00000464316 Q6ZR54 194 aa2.43□□□□□ -2.02
CCNL1-204ENST00000464316 UQCR11O14957 56 aa2.42□□□□□ -2.02
CCNL1-204ENST00000464316 PLA2G1BP04054 148 aaKnown RBP2.42□□□□□ -2.02
CCNL1-204ENST00000464316 ZNF706Q9Y5V0 76 aaPredicted RBP2.42□□□□□ -2.02
CCNL1-204ENST00000464316 DCHS2Q6V1P9 2916 aa2.42□□□□□ -2.02
CCNL1-204ENST00000464316 PLAC8Q9NZF1 115 aa2.42□□□□□ -2.02
CCNL1-204ENST00000464316 ITPR1Q14643 2758 aa2.42□□□□□ -2.02
CCNL1-204ENST00000464316 MYO18BQ8IUG5 2567 aa2.42□□□□□ -2.02
CCNL1-204ENST00000464316 DMXL1Q9Y485 3027 aa2.41□□□□□ -2.02
CCNL1-204ENST00000464316 CSMD1Q96PZ7 3565 aa2.41□□□□□ -2.02
CCNL1-204ENST00000464316 A0A1B0GVX0 72 aa2.41□□□□□ -2.02
CCNL1-204ENST00000464316 MDFIQ99750 246 aa2.41□□□□□ -2.02
CCNL1-204ENST00000464316 H3BS24 57 aa2.4□□□□□ -2.02
CCNL1-204ENST00000464316 MIR22HGQ0VDD5 57 aa2.4□□□□□ -2.02
CCNL1-204ENST00000464316 ATMQ13315 3056 aa2.4□□□□□ -2.03
CCNL1-204ENST00000464316 KRTAP1-3Q8IUG1 177 aa2.4□□□□□ -2.03
CCNL1-204ENST00000464316 PRR26Q8N8Z3 221 aa2.4□□□□□ -2.03
CCNL1-204ENST00000464316 UBR5O95071 2799 aaPredicted RBP2.4□□□□□ -2.03
CCNL1-204ENST00000464316 IGLV9-49A0A0B4J1Y8 123 aa2.4□□□□□ -2.03
CCNL1-204ENST00000464316 CHD8Q9HCK8 2581 aa2.4□□□□□ -2.03
CCNL1-204ENST00000464316 F8P00451 2351 aa2.4□□□□□ -2.03
CCNL1-204ENST00000464316 PRAC1Q96KF2 57 aa2.39□□□□□ -2.03
CCNL1-204ENST00000464316 ASH1LQ9NR48 2969 aaKnown RBP2.39□□□□□ -2.03
CCNL1-204ENST00000464316 MTORP42345 2549 aa2.39□□□□□ -2.03
CCNL1-204ENST00000464316 KRTAP10-3P60369 221 aa2.39□□□□□ -2.03
CCNL1-204ENST00000464316 UBE2DNLQ8IWF7 75 aa2.39□□□□□ -2.03
CCNL1-204ENST00000464316 CUBNO60494 3623 aa2.38□□□□□ -2.03
CCNL1-204ENST00000464316 SPATA8Q6RVD6 105 aa2.38□□□□□ -2.03
CCNL1-204ENST00000464316 GCN1Q92616 2671 aaKnown RBP2.38□□□□□ -2.03
CCNL1-204ENST00000464316 KRTAP7-1Q8IUC3 87 aa2.38□□□□□ -2.03
CCNL1-204ENST00000464316 DNAH2Q9P225 4427 aa2.38□□□□□ -2.03
CCNL1-204ENST00000464316 ASPMQ8IZT6 3477 aa2.38□□□□□ -2.03
CCNL1-204ENST00000464316 VPS13BQ7Z7G8 4022 aa2.37□□□□□ -2.03
CCNL1-204ENST00000464316 FAM229AH3BQW9 127 aa2.37□□□□□ -2.03
CCNL1-204ENST00000464316 DNAH9Q9NYC9 4486 aa2.37□□□□□ -2.03
CCNL1-204ENST00000464316 NBEAL2Q6ZNJ1 2754 aa2.37□□□□□ -2.03
CCNL1-204ENST00000464316 DNAH8Q96JB1 4490 aa2.37□□□□□ -2.03
CCNL1-204ENST00000464316 TNXBP22105 4242 aa2.37□□□□□ -2.03
CCNL1-204ENST00000464316 SPTBN4Q9H254 2564 aa2.37□□□□□ -2.03
CCNL1-204ENST00000464316 CASC10Q5T4H9 136 aa2.37□□□□□ -2.03
CCNL1-204ENST00000464316 SETXQ7Z333 2677 aaKnown RBP2.36□□□□□ -2.03
CCNL1-204ENST00000464316 KRTAP1-1Q07627 177 aa2.36□□□□□ -2.03
CCNL1-204ENST00000464316 PIEZO1Q92508 2521 aa2.36□□□□□ -2.03
CCNL1-204ENST00000464316 COL12A1Q99715 3063 aa2.36□□□□□ -2.03
CCNL1-204ENST00000464316 SPINK6Q6UWN8 80 aa2.36□□□□□ -2.03
CCNL1-204ENST00000464316 PKD1P98161 4303 aa2.36□□□□□ -2.03
CCNL1-204ENST00000464316 TEX15Q9BXT5 2789 aa2.36□□□□□ -2.03
CCNL1-204ENST00000464316 DMAC1Q96GE9 116 aa2.36□□□□□ -2.03
CCNL1-204ENST00000464316 K7ERS5 55 aa2.35□□□□□ -2.03
CCNL1-204ENST00000464316 OXLD1Q5BKU9 147 aa2.35□□□□□ -2.03
CCNL1-204ENST00000464316 RTL8CO15255 209 aa2.35□□□□□ -2.03
CCNL1-204ENST00000464316 UTP20O75691 2785 aaKnown RBP2.34□□□□□ -2.03
CCNL1-204ENST00000464316 ZNF462Q96JM2 2506 aa2.34□□□□□ -2.03
CCNL1-204ENST00000464316 ACANP16112 2415 aa2.34□□□□□ -2.03
CCNL1-204ENST00000464316 CSAG1Q6PB30 78 aa2.34□□□□□ -2.03
CCNL1-204ENST00000464316 UNC79Q9P2D8 2635 aa2.34□□□□□ -2.03
CCNL1-204ENST00000464316 CSMD3Q7Z407 3707 aa2.34□□□□□ -2.04
CCNL1-204ENST00000464316 MXRA5Q9NR99 2828 aa2.34□□□□□ -2.04
CCNL1-204ENST00000464316 PDZD2O15018 2839 aa2.34□□□□□ -2.04
CCNL1-204ENST00000464316 APCP25054 2843 aa2.34□□□□□ -2.04
CCNL1-204ENST00000464316 NOTCH2Q04721 2471 aa2.34□□□□□ -2.04
CCNL1-204ENST00000464316 ZANQ9Y493 2812 aa2.33□□□□□ -2.04
CCNL1-204ENST00000464316 CHTF8P0CG12 524 aa2.33□□□□□ -2.04
CCNL1-204ENST00000464316 ADM2Q7Z4H4 148 aa2.33□□□□□ -2.04
CCNL1-204ENST00000464316 Q96NJ1 140 aa2.33□□□□□ -2.04
CCNL1-204ENST00000464316 CENPEQ02224 2701 aa2.33□□□□□ -2.04
CCNL1-204ENST00000464316 INAFM1C9JVW0 142 aa2.33□□□□□ -2.04
CCNL1-204ENST00000464316 FLNAP21333 2647 aaKnown RBP2.33□□□□□ -2.04
CCNL1-204ENST00000464316 CELSR1Q9NYQ6 3014 aa2.33□□□□□ -2.04
CCNL1-204ENST00000464316 LINC00483Q53H64 154 aa2.32□□□□□ -2.04
CCNL1-204ENST00000464316 ITPR3Q14573 2671 aa2.32□□□□□ -2.04
CCNL1-204ENST00000464316 SVEP1Q4LDE5 3571 aa2.32□□□□□ -2.04
CCNL1-204ENST00000464316 SSBP3-AS1Q7Z2R9 100 aa2.32□□□□□ -2.04
CCNL1-204ENST00000464316 SMR3AQ99954 134 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms