RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 MYO15AQ9UKN7 3530 aa5.42□□□□□ -1.54
BRCA1-205ENST00000461221 KRTAP26-1Q6PEX3 210 aa5.41□□□□□ -1.54
BRCA1-205ENST00000461221 CYSTM1Q9H1C7 97 aa5.4□□□□□ -1.54
BRCA1-205ENST00000461221 XIRP2A4UGR9 3374 aa5.4□□□□□ -1.54
BRCA1-205ENST00000461221 UNC80Q8N2C7 3258 aa5.4□□□□□ -1.55
BRCA1-205ENST00000461221 MTORP42345 2549 aa5.4□□□□□ -1.55
BRCA1-205ENST00000461221 REV3LO60673 3130 aa5.4□□□□□ -1.55
BRCA1-205ENST00000461221 SZT2Q5T011 3432 aa5.4□□□□□ -1.55
BRCA1-205ENST00000461221 CHD8Q9HCK8 2581 aa5.39□□□□□ -1.55
BRCA1-205ENST00000461221 Q8NDZ9 215 aa5.39□□□□□ -1.55
BRCA1-205ENST00000461221 ANKRD11Q6UB99 2663 aaPredicted RBP5.38□□□□□ -1.55
BRCA1-205ENST00000461221 Q5VSD8 79 aa5.38□□□□□ -1.55
BRCA1-205ENST00000461221 ADM2Q7Z4H4 148 aa5.38□□□□□ -1.55
BRCA1-205ENST00000461221 DNAH14Q0VDD8 3507 aa5.37□□□□□ -1.55
BRCA1-205ENST00000461221 KRTAP16-1A8MUX0 517 aa5.37□□□□□ -1.55
BRCA1-205ENST00000461221 Q6ZR54 194 aa5.37□□□□□ -1.55
BRCA1-205ENST00000461221 CDH23Q9H251 3354 aa5.36□□□□□ -1.55
BRCA1-205ENST00000461221 CEP350Q5VT06 3117 aa5.35□□□□□ -1.55
BRCA1-205ENST00000461221 OXTP01178 125 aa5.34□□□□□ -1.56
BRCA1-205ENST00000461221 SPATA8Q6RVD6 105 aa5.33□□□□□ -1.56
BRCA1-205ENST00000461221 PANO1I0J062 215 aa5.32□□□□□ -1.56
BRCA1-205ENST00000461221 HTTP42858 3142 aa5.31□□□□□ -1.56
BRCA1-205ENST00000461221 EYSQ5T1H1 3165 aa5.31□□□□□ -1.56
BRCA1-205ENST00000461221 SPENQ96T58 3664 aaKnown RBP5.29□□□□□ -1.56
BRCA1-205ENST00000461221 CEP295Q9C0D2 2601 aa5.28□□□□□ -1.56
BRCA1-205ENST00000461221 KRTAP10-1P60331 282 aa5.28□□□□□ -1.56
BRCA1-205ENST00000461221 LCE6AA0A183 80 aa5.28□□□□□ -1.56
BRCA1-205ENST00000461221 POLQO75417 2590 aa5.28□□□□□ -1.56
BRCA1-205ENST00000461221 C20orf166-AS1Q96NR2 134 aa5.27□□□□□ -1.57
BRCA1-205ENST00000461221 KRTAP29-1A8MX34 341 aaPredicted RBP5.27□□□□□ -1.57
BRCA1-205ENST00000461221 KRTAP25-1Q3LHN0 102 aa5.27□□□□□ -1.57
BRCA1-205ENST00000461221 KRTAP1-5Q9BYS1 174 aa5.26□□□□□ -1.57
BRCA1-205ENST00000461221 DMDP11532 3685 aa5.25□□□□□ -1.57
BRCA1-205ENST00000461221 RANBP2P49792 3224 aaKnown RBP5.25□□□□□ -1.57
BRCA1-205ENST00000461221 SPTBN4Q9H254 2564 aa5.24□□□□□ -1.57
BRCA1-205ENST00000461221 KRTAP10-2P60368 255 aa5.23□□□□□ -1.57
BRCA1-205ENST00000461221 SPEGQ15772 3267 aa5.23□□□□□ -1.57
BRCA1-205ENST00000461221 MKI67P46013 3256 aaKnown RBP5.22□□□□□ -1.57
BRCA1-205ENST00000461221 FASNP49327 2511 aaKnown RBP5.22□□□□□ -1.57
BRCA1-205ENST00000461221 RPS29P62273 56 aaKnown RBP5.21□□□□□ -1.58
BRCA1-205ENST00000461221 KRTAP4-16G5E9R7 235 aaPredicted RBP5.21□□□□□ -1.58
BRCA1-205ENST00000461221 A8MUU9 505 aa5.2□□□□□ -1.58
BRCA1-205ENST00000461221 WDR87Q6ZQQ6 2873 aa5.19□□□□□ -1.58
BRCA1-205ENST00000461221 A6NN06 94 aa5.19□□□□□ -1.58
BRCA1-205ENST00000461221 CFAP54Q96N23 3096 aa5.17□□□□□ -1.58
BRCA1-205ENST00000461221 FLG2Q5D862 2391 aaPredicted RBP5.16□□□□□ -1.58
BRCA1-205ENST00000461221 A0A087X002 238 aa5.16□□□□□ -1.58
BRCA1-205ENST00000461221 A8MU10 97 aa5.15□□□□□ -1.59
BRCA1-205ENST00000461221 NDUFAF8A1L188 74 aa5.14□□□□□ -1.59
BRCA1-205ENST00000461221 MGAM2Q2M2H8 2515 aa5.14□□□□□ -1.59
BRCA1-205ENST00000461221 TNP1P09430 55 aa5.14□□□□□ -1.59
BRCA1-205ENST00000461221 USP24Q9UPU5 2620 aa5.14□□□□□ -1.59
BRCA1-205ENST00000461221 NOTCH2NLQ7Z3S9 236 aa5.12□□□□□ -1.59
BRCA1-205ENST00000461221 C10orf95Q9H7T3 257 aa5.08□□□□□ -1.6
BRCA1-205ENST00000461221 MUC3AQ02505 3323 aa5.04□□□□□ -1.6
BRCA1-205ENST00000461221 PP632Q6XCG6 107 aa5.03□□□□□ -1.6
BRCA1-205ENST00000461221 KRTAP11-1Q8IUC1 163 aa5.01□□□□□ -1.61
BRCA1-205ENST00000461221 PRUNE2Q8WUY3 3088 aa5□□□□□ -1.61
BRCA1-205ENST00000461221 DMBT1Q9UGM3 2413 aaPredicted RBP5□□□□□ -1.61
BRCA1-205ENST00000461221 HECTD1Q9ULT8 2610 aa4.99□□□□□ -1.61
BRCA1-205ENST00000461221 C5orf42Q9H799 3197 aa4.99□□□□□ -1.61
BRCA1-205ENST00000461221 Q6ZRN7 208 aaPredicted RBP4.99□□□□□ -1.61
BRCA1-205ENST00000461221 EPG5Q9HCE0 2579 aa4.99□□□□□ -1.61
BRCA1-205ENST00000461221 KRTAP13-2Q52LG2 175 aa4.99□□□□□ -1.61
BRCA1-205ENST00000461221 KRTAP13-1Q8IUC0 172 aa4.96□□□□□ -1.62
BRCA1-205ENST00000461221 FLNAP21333 2647 aaKnown RBP4.95□□□□□ -1.62
BRCA1-205ENST00000461221 LAMA1P25391 3075 aa4.93□□□□□ -1.62
BRCA1-205ENST00000461221 ASPMQ8IZT6 3477 aa4.92□□□□□ -1.62
BRCA1-205ENST00000461221 ZFHX4Q86UP3 3567 aa4.92□□□□□ -1.62
BRCA1-205ENST00000461221 STAB1Q9NY15 2570 aa4.92□□□□□ -1.62
BRCA1-205ENST00000461221 FLNBO75369 2602 aaKnown RBP4.92□□□□□ -1.62
BRCA1-205ENST00000461221 KRTAP7-1Q8IUC3 87 aa4.92□□□□□ -1.62
BRCA1-205ENST00000461221 A0A0C4DFX4 3053 aa4.92□□□□□ -1.62
BRCA1-205ENST00000461221 ZFHX3Q15911 3703 aa4.91□□□□□ -1.62
BRCA1-205ENST00000461221 ATRQ13535 2644 aa4.91□□□□□ -1.62
BRCA1-205ENST00000461221 FREM2Q5SZK8 3169 aa4.9□□□□□ -1.63
BRCA1-205ENST00000461221 ITPR3Q14573 2671 aa4.9□□□□□ -1.63
BRCA1-205ENST00000461221 KRTAP10-8P60410 259 aa4.89□□□□□ -1.63
BRCA1-205ENST00000461221 CELSR3Q9NYQ7 3312 aa4.88□□□□□ -1.63
BRCA1-205ENST00000461221 COL6A3P12111 3177 aa4.88□□□□□ -1.63
BRCA1-205ENST00000461221 MAST4O15021 2626 aa4.88□□□□□ -1.63
BRCA1-205ENST00000461221 NBEAL1Q6ZS30 2694 aa4.86□□□□□ -1.63
BRCA1-205ENST00000461221 P0C880 135 aa4.84□□□□□ -1.63
BRCA1-205ENST00000461221 CHD7Q9P2D1 2997 aa4.84□□□□□ -1.64
BRCA1-205ENST00000461221 SMG1Q96Q15 3661 aaKnown RBP4.84□□□□□ -1.64
BRCA1-205ENST00000461221 FRYLO94915 3013 aa4.84□□□□□ -1.64
BRCA1-205ENST00000461221 RELNP78509 3460 aa4.82□□□□□ -1.64
BRCA1-205ENST00000461221 BSNQ9UPA5 3926 aa4.82□□□□□ -1.64
BRCA1-205ENST00000461221 HELZ2Q9BYK8 2649 aaKnown RBP4.8□□□□□ -1.64
BRCA1-205ENST00000461221 PRO2289Q9P1D8 64 aa4.8□□□□□ -1.64
BRCA1-205ENST00000461221 TRIOO75962 3097 aa4.79□□□□□ -1.64
BRCA1-205ENST00000461221 VPS13AQ96RL7 3174 aa4.79□□□□□ -1.64
BRCA1-205ENST00000461221 CHD9Q3L8U1 2897 aa4.78□□□□□ -1.64
BRCA1-205ENST00000461221 WDFY4Q6ZS81 3184 aa4.78□□□□□ -1.64
BRCA1-205ENST00000461221 CFAP46Q8IYW2 2715 aa4.78□□□□□ -1.64
BRCA1-205ENST00000461221 XP32Q5T750 250 aa4.77□□□□□ -1.65
BRCA1-205ENST00000461221 STAB2Q8WWQ8 2551 aa4.77□□□□□ -1.65
BRCA1-205ENST00000461221 CFAP47Q6ZTR5 3102 aa4.76□□□□□ -1.65
BRCA1-205ENST00000461221 LOC400499M0QZD8 3231 aa4.76□□□□□ -1.65
BRCA1-205ENST00000461221 TRANK1O15050 2925 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 178.2 ms