RNA–Protein interactions for RNA: ENST00000424968.5

LINC00240-202, long intergenic non-protein coding RNA 240, humanhuman

TSL 2

Gene LINC00240, Length 507 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-202ENST00000424968 CSPG4Q6UVK1 2322 aa1.24□□□□□ -2.21
LINC00240-202ENST00000424968 IGF2RP11717 2491 aa1.24□□□□□ -2.21
LINC00240-202ENST00000424968 TENM4Q6N022 2769 aa1.24□□□□□ -2.21
LINC00240-202ENST00000424968 ATRQ13535 2644 aa1.24□□□□□ -2.21
LINC00240-202ENST00000424968 PTPN13Q12923 2485 aa1.24□□□□□ -2.21
LINC00240-202ENST00000424968 ZFYVE26Q68DK2 2539 aa1.23□□□□□ -2.21
LINC00240-202ENST00000424968 VWFP04275 2813 aa1.23□□□□□ -2.21
LINC00240-202ENST00000424968 CHD6Q8TD26 2715 aa1.23□□□□□ -2.21
LINC00240-202ENST00000424968 IQGAP2Q13576 1575 aa1.22□□□□□ -2.21
LINC00240-202ENST00000424968 H0YGG7 62 aa1.21□□□□□ -2.22
LINC00240-202ENST00000424968 H3BUA1 57 aa1.21□□□□□ -2.22
LINC00240-202ENST00000424968 LINC00308Q8TCZ7 52 aa1.2□□□□□ -2.22
LINC00240-202ENST00000424968 REV3LO60673 3130 aa1.2□□□□□ -2.22
LINC00240-202ENST00000424968 NCOR1O75376 2440 aa1.2□□□□□ -2.22
LINC00240-202ENST00000424968 KRTAP2-3P0C7H8 128 aa1.19□□□□□ -2.22
LINC00240-202ENST00000424968 KRTAP2-4Q9BYR9 128 aa1.19□□□□□ -2.22
LINC00240-202ENST00000424968 KRTAP2-1Q9BYU5 128 aa1.19□□□□□ -2.22
LINC00240-202ENST00000424968 ABRACLQ9P1F3 81 aa1.19□□□□□ -2.22
LINC00240-202ENST00000424968 CRCT1Q9UGL9 99 aa1.19□□□□□ -2.22
LINC00240-202ENST00000424968 TRANK1O15050 2925 aa1.19□□□□□ -2.22
LINC00240-202ENST00000424968 UNC79Q9P2D8 2635 aa1.19□□□□□ -2.22
LINC00240-202ENST00000424968 M0R2T5 61 aa1.18□□□□□ -2.22
LINC00240-202ENST00000424968 CHD8Q9HCK8 2581 aa1.18□□□□□ -2.22
LINC00240-202ENST00000424968 WT1-ASQ06250 92 aa1.17□□□□□ -2.22
LINC00240-202ENST00000424968 DEFB135Q30KP9 77 aa1.17□□□□□ -2.22
LINC00240-202ENST00000424968 TOMM5Q8N4H5 51 aa1.17□□□□□ -2.22
LINC00240-202ENST00000424968 SMIM27A0A1W2PRY6 76 aa1.16□□□□□ -2.22
LINC00240-202ENST00000424968 LINC01546A6NGU7 62 aa1.16□□□□□ -2.22
LINC00240-202ENST00000424968 FRAS1Q86XX4 4008 aa1.16□□□□□ -2.22
LINC00240-202ENST00000424968 RPS27P42677 84 aaKnown RBP1.15□□□□□ -2.23
LINC00240-202ENST00000424968 RPS27LQ71UM5 84 aaKnown RBP1.15□□□□□ -2.23
LINC00240-202ENST00000424968 ZNF469Q96JG9 3925 aaPredicted RBP1.14□□□□□ -2.23
LINC00240-202ENST00000424968 CSMD3Q7Z407 3707 aa1.14□□□□□ -2.23
LINC00240-202ENST00000424968 FAM208AQ9UK61 1670 aaKnown RBP1.13□□□□□ -2.23
LINC00240-202ENST00000424968 LMO7Q8WWI1 1683 aa1.11□□□□□ -2.23
LINC00240-202ENST00000424968 SRCAPQ6ZRS2 3230 aa1.11□□□□□ -2.23
LINC00240-202ENST00000424968 TIMM8BQ9Y5J9 83 aaPredicted RBP1.11□□□□□ -2.23
LINC00240-202ENST00000424968 NAV2Q8IVL1 2488 aa1.11□□□□□ -2.23
LINC00240-202ENST00000424968 EP300Q09472 2414 aaPredicted RBP1.1□□□□□ -2.23
LINC00240-202ENST00000424968 DDX60Q8IY21 1712 aaKnown RBP1.1□□□□□ -2.23
LINC00240-202ENST00000424968 PRLHP81277 87 aa1.09□□□□□ -2.23
LINC00240-202ENST00000424968 KRTAP4-1Q9BYQ7 146 aa1.09□□□□□ -2.23
LINC00240-202ENST00000424968 HMCN1Q96RW7 5635 aa1.09□□□□□ -2.24
LINC00240-202ENST00000424968 ANK2Q01484 3957 aa1.09□□□□□ -2.24
LINC00240-202ENST00000424968 DSPP15924 2871 aaKnown RBP1.09□□□□□ -2.24
LINC00240-202ENST00000424968 DEFB106AQ8N104 65 aa1.08□□□□□ -2.24
LINC00240-202ENST00000424968 S4R3F8 94 aa1.07□□□□□ -2.24
LINC00240-202ENST00000424968 USP24Q9UPU5 2620 aa1.07□□□□□ -2.24
LINC00240-202ENST00000424968 FCGBPQ9Y6R7 5405 aaPredicted RBP1.06□□□□□ -2.24
LINC00240-202ENST00000424968 OTOGQ6ZRI0 2925 aa1.06□□□□□ -2.24
LINC00240-202ENST00000424968 CREBBPQ92793 2442 aa1.04□□□□□ -2.24
LINC00240-202ENST00000424968 NOP10Q9NPE3 64 aaKnown RBP1.04□□□□□ -2.24
LINC00240-202ENST00000424968 HECTD1Q9ULT8 2610 aa1.04□□□□□ -2.24
LINC00240-202ENST00000424968 IQGAP1P46940 1657 aa1.03□□□□□ -2.24
LINC00240-202ENST00000424968 KIF21BO75037 1637 aa1.02□□□□□ -2.25
LINC00240-202ENST00000424968 PKD1L1Q8TDX9 2849 aa1.02□□□□□ -2.25
LINC00240-202ENST00000424968 NCOR2Q9Y618 2525 aa1.01□□□□□ -2.25
LINC00240-202ENST00000424968 SMIM2Q9BVW6 85 aa1.01□□□□□ -2.25
LINC00240-202ENST00000424968 CEP290O15078 2479 aa1.01□□□□□ -2.25
LINC00240-202ENST00000424968 PCNX1Q96RV3 2341 aa1.01□□□□□ -2.25
LINC00240-202ENST00000424968 WNK1Q9H4A3 2382 aa0.99□□□□□ -2.25
LINC00240-202ENST00000424968 ALMS1Q8TCU4 4167 aa0.99□□□□□ -2.25
LINC00240-202ENST00000424968 CEP350Q5VT06 3117 aa0.98□□□□□ -2.25
LINC00240-202ENST00000424968 IGSF10Q6WRI0 2623 aa0.98□□□□□ -2.25
LINC00240-202ENST00000424968 APC2O95996 2303 aa0.98□□□□□ -2.25
LINC00240-202ENST00000424968 MAP1BP46821 2468 aaKnown RBP0.97□□□□□ -2.25
LINC00240-202ENST00000424968 HIVEP3Q5T1R4 2406 aa0.97□□□□□ -2.25
LINC00240-202ENST00000424968 UBR5O95071 2799 aaPredicted RBP0.96□□□□□ -2.25
LINC00240-202ENST00000424968 PKD1L2Q7Z442 2459 aa0.95□□□□□ -2.26
LINC00240-202ENST00000424968 AKAP13Q12802 2813 aa0.95□□□□□ -2.26
LINC00240-202ENST00000424968 PRRC2CQ9Y520 2896 aaKnown RBP0.95□□□□□ -2.26
LINC00240-202ENST00000424968 NBASA2RRP1 2371 aa0.94□□□□□ -2.26
LINC00240-202ENST00000424968 TRPM2O94759 1503 aa0.94□□□□□ -2.26
LINC00240-202ENST00000424968 A0A0C4DFX4 3053 aa0.94□□□□□ -2.26
LINC00240-202ENST00000424968 C9orf92A6NGG3 77 aa0.94□□□□□ -2.26
LINC00240-202ENST00000424968 PRM1P04553 51 aa0.94□□□□□ -2.26
LINC00240-202ENST00000424968 WFDC10BQ8IUB3 73 aa0.94□□□□□ -2.26
LINC00240-202ENST00000424968 SETXQ7Z333 2677 aaKnown RBP0.93□□□□□ -2.26
LINC00240-202ENST00000424968 ATP7AQ04656 1500 aa0.93□□□□□ -2.26
LINC00240-202ENST00000424968 DEFB131AP59861 70 aa0.92□□□□□ -2.26
LINC00240-202ENST00000424968 KAAG1Q9UBP8 84 aa0.92□□□□□ -2.26
LINC00240-202ENST00000424968 ACANP16112 2415 aa0.91□□□□□ -2.26
LINC00240-202ENST00000424968 TNXBP22105 4242 aa0.89□□□□□ -2.27
LINC00240-202ENST00000424968 IGLV5-48A0A075B6I7 105 aa0.89□□□□□ -2.27
LINC00240-202ENST00000424968 SPRR2DP22532 72 aa0.89□□□□□ -2.27
LINC00240-202ENST00000424968 TFF3Q07654 80 aa0.89□□□□□ -2.27
LINC00240-202ENST00000424968 KRTAP21-1Q3LI58 79 aa0.89□□□□□ -2.27
LINC00240-202ENST00000424968 PCNTO95613 3336 aa0.89□□□□□ -2.27
LINC00240-202ENST00000424968 CLTCL1P53675 1640 aa0.89□□□□□ -2.27
LINC00240-202ENST00000424968 UTRNP46939 3433 aa0.89□□□□□ -2.27
LINC00240-202ENST00000424968 SAMD9LQ8IVG5 1584 aa0.88□□□□□ -2.27
LINC00240-202ENST00000424968 NDUFA1O15239 70 aa0.87□□□□□ -2.27
LINC00240-202ENST00000424968 TOP2AP11388 1531 aaKnown RBP0.87□□□□□ -2.27
LINC00240-202ENST00000424968 NFAT5O94916 1531 aa0.85□□□□□ -2.27
LINC00240-202ENST00000424968 BSNQ9UPA5 3926 aa0.84□□□□□ -2.28
LINC00240-202ENST00000424968 HUWE1Q7Z6Z7 4374 aaKnown RBP0.84□□□□□ -2.28
LINC00240-202ENST00000424968 M0QY20 66 aa0.83□□□□□ -2.28
LINC00240-202ENST00000424968 MUC3AQ02505 3323 aa0.83□□□□□ -2.28
LINC00240-202ENST00000424968 CACNA1AO00555 2505 aa0.83□□□□□ -2.28
LINC00240-202ENST00000424968 TNRC18O15417 2968 aaPredicted RBP0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms