RNA–Protein interactions for RNA: ENST00000424968.5

LINC00240-202, long intergenic non-protein coding RNA 240, humanhuman

TSL 2

Gene LINC00240, Length 507 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-202ENST00000424968 AEBP2Q6ZN18 517 aaPredicted RBP17.2■□□□□ 0.34
LINC00240-202ENST00000424968 CHIC1Q5VXU3 224 aa16.74■□□□□ 0.27
LINC00240-202ENST00000424968 SENP3Q9H4L4 574 aaPredicted RBP14.72□□□□□ -0.05
LINC00240-202ENST00000424968 PHF23Q9BUL5 403 aaPredicted RBP14.66□□□□□ -0.06
LINC00240-202ENST00000424968 PLPPR3Q6T4P5 718 aa13.87□□□□□ -0.19
LINC00240-202ENST00000424968 FOXD1Q16676 465 aa13.61□□□□□ -0.23
LINC00240-202ENST00000424968 EHMT2Q96KQ7 1210 aa13.43□□□□□ -0.26
LINC00240-202ENST00000424968 ADRA2BP18089 450 aa13.03□□□□□ -0.32
LINC00240-202ENST00000424968 KCNA4P22459 653 aa13.01□□□□□ -0.33
LINC00240-202ENST00000424968 PPP6R1Q9UPN7 881 aa12.99□□□□□ -0.33
LINC00240-202ENST00000424968 PIAS4Q8N2W9 510 aaPredicted RBP12.9□□□□□ -0.34
LINC00240-202ENST00000424968 SLC24A1O60721 1099 aa12.86□□□□□ -0.35
LINC00240-202ENST00000424968 CSRNP3Q8WYN3 585 aa12.76□□□□□ -0.37
LINC00240-202ENST00000424968 SLC4A1APQ9BWU0 796 aaKnown RBP12.72□□□□□ -0.37
LINC00240-202ENST00000424968 MSH5O43196 834 aa12.66□□□□□ -0.38
LINC00240-202ENST00000424968 AMER1Q5JTC6 1135 aaPredicted RBP12.47□□□□□ -0.41
LINC00240-202ENST00000424968 NCBP3Q53F19 620 aaKnown RBP12.44□□□□□ -0.42
LINC00240-202ENST00000424968 PPP4R3CPQ6ZMV5 832 aa12.25□□□□□ -0.45
LINC00240-202ENST00000424968 RTN4Q9NQC3 1192 aaKnown RBP12.23□□□□□ -0.45
LINC00240-202ENST00000424968 SCAF1Q9H7N4 1312 aaKnown RBP12.01□□□□□ -0.49
LINC00240-202ENST00000424968 NPM3O75607 178 aaKnown RBP11.99□□□□□ -0.49
LINC00240-202ENST00000424968 ZBTB22O15209 634 aa11.88□□□□□ -0.51
LINC00240-202ENST00000424968 FOXD4L1Q9NU39 408 aa11.84□□□□□ -0.51
LINC00240-202ENST00000424968 MAPK8IP2Q13387 824 aaPredicted RBP11.83□□□□□ -0.52
LINC00240-202ENST00000424968 CNKSR2Q8WXI2 1034 aa11.76□□□□□ -0.53
LINC00240-202ENST00000424968 DMRT2Q9Y5R5 561 aa11.69□□□□□ -0.54
LINC00240-202ENST00000424968 POTEDQ86YR6 584 aa11.68□□□□□ -0.54
LINC00240-202ENST00000424968 DNAJC5BQ9UF47 199 aa11.63□□□□□ -0.55
LINC00240-202ENST00000424968 FKBP8Q14318 412 aa11.56□□□□□ -0.56
LINC00240-202ENST00000424968 ATXN8OSP0DMR3 200 aa11.44□□□□□ -0.58
LINC00240-202ENST00000424968 RNF216Q9NWF9 866 aaPredicted RBP11.42□□□□□ -0.58
LINC00240-202ENST00000424968 BCANQ96GW7 911 aa11.38□□□□□ -0.59
LINC00240-202ENST00000424968 HOXD11P31277 338 aaPredicted RBP11.37□□□□□ -0.59
LINC00240-202ENST00000424968 DCAF8L1A6NGE4 600 aa11.36□□□□□ -0.59
LINC00240-202ENST00000424968 PLCB2Q00722 1185 aa11.33□□□□□ -0.6
LINC00240-202ENST00000424968 MYCNP04198 464 aaPredicted RBP11.2□□□□□ -0.62
LINC00240-202ENST00000424968 HAP1P54257 671 aaPredicted RBP11.19□□□□□ -0.62
LINC00240-202ENST00000424968 TAOK2Q9UL54 1235 aa11.16□□□□□ -0.62
LINC00240-202ENST00000424968 VSIG10Q8N0Z9 540 aa11.14□□□□□ -0.63
LINC00240-202ENST00000424968 FBXO3Q9UK99 471 aa11.1□□□□□ -0.63
LINC00240-202ENST00000424968 PRKCSHP14314 528 aaPredicted RBP11.05□□□□□ -0.64
LINC00240-202ENST00000424968 SLC4A2P04920 1241 aa11□□□□□ -0.65
LINC00240-202ENST00000424968 DCAF8L2P0C7V8 631 aa10.99□□□□□ -0.65
LINC00240-202ENST00000424968 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.99□□□□□ -0.65
LINC00240-202ENST00000424968 ERICH6Q7L0X2 663 aa10.98□□□□□ -0.65
LINC00240-202ENST00000424968 TPRNQ4KMQ1 711 aa10.94□□□□□ -0.66
LINC00240-202ENST00000424968 DAXXQ9UER7 740 aaPredicted RBP10.91□□□□□ -0.66
LINC00240-202ENST00000424968 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.89□□□□□ -0.67
LINC00240-202ENST00000424968 ARXQ96QS3 562 aa10.87□□□□□ -0.67
LINC00240-202ENST00000424968 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.82□□□□□ -0.68
LINC00240-202ENST00000424968 HNRNPUL2Q1KMD3 747 aaKnown RBP10.82□□□□□ -0.68
LINC00240-202ENST00000424968 RNF39Q9H2S5 420 aa10.78□□□□□ -0.68
LINC00240-202ENST00000424968 SAMD1Q6SPF0 538 aaPredicted RBP10.75□□□□□ -0.69
LINC00240-202ENST00000424968 BBXQ8WY36 941 aaPredicted RBP10.75□□□□□ -0.69
LINC00240-202ENST00000424968 VASPP50552 380 aaPredicted RBP10.73□□□□□ -0.69
LINC00240-202ENST00000424968 CACNB1Q02641 598 aaPredicted RBP10.7□□□□□ -0.7
LINC00240-202ENST00000424968 C1QBPQ07021 282 aaKnown RBP10.69□□□□□ -0.7
LINC00240-202ENST00000424968 U3KPZ7 1027 aaPredicted RBP10.67□□□□□ -0.7
LINC00240-202ENST00000424968 SPDYE4A6NLX3 237 aa10.64□□□□□ -0.71
LINC00240-202ENST00000424968 TULP1O00294 542 aaPredicted RBP10.64□□□□□ -0.71
LINC00240-202ENST00000424968 KDM2AQ9Y2K7 1162 aa10.64□□□□□ -0.71
LINC00240-202ENST00000424968 NBR1Q14596 966 aa10.63□□□□□ -0.71
LINC00240-202ENST00000424968 PAXIP1Q6ZW49 1069 aaPredicted RBP10.63□□□□□ -0.71
LINC00240-202ENST00000424968 TIMELESSQ9UNS1 1208 aa10.62□□□□□ -0.71
LINC00240-202ENST00000424968 GTF3C3Q9Y5Q9 886 aa10.62□□□□□ -0.71
LINC00240-202ENST00000424968 CFAP44Q96MT7 982 aa10.6□□□□□ -0.71
LINC00240-202ENST00000424968 PKD2Q13563 968 aa10.59□□□□□ -0.71
LINC00240-202ENST00000424968 HOMEZQ8IX15 550 aa10.58□□□□□ -0.72
LINC00240-202ENST00000424968 IFNLR1Q8IU57 520 aaPredicted RBP10.57□□□□□ -0.72
LINC00240-202ENST00000424968 SPRYD3Q8NCJ5 442 aa10.57□□□□□ -0.72
LINC00240-202ENST00000424968 APLP2Q06481 763 aa10.56□□□□□ -0.72
LINC00240-202ENST00000424968 ATF5Q9Y2D1 282 aaPredicted RBP10.55□□□□□ -0.72
LINC00240-202ENST00000424968 FBLN2P98095 1184 aa10.54□□□□□ -0.72
LINC00240-202ENST00000424968 PROM2Q8N271 834 aa10.53□□□□□ -0.72
LINC00240-202ENST00000424968 CAPN15O75808 1086 aa10.49□□□□□ -0.73
LINC00240-202ENST00000424968 ECM2O94769 699 aaPredicted RBP10.48□□□□□ -0.73
LINC00240-202ENST00000424968 ZNF219Q9P2Y4 722 aaPredicted RBP10.48□□□□□ -0.73
LINC00240-202ENST00000424968 TMEM132AQ24JP5 1023 aa10.44□□□□□ -0.74
LINC00240-202ENST00000424968 SPOCK2Q92563 424 aa10.44□□□□□ -0.74
LINC00240-202ENST00000424968 SPINK5Q9NQ38 1064 aaPredicted RBP10.43□□□□□ -0.74
LINC00240-202ENST00000424968 TRHP20396 242 aaPredicted RBP10.41□□□□□ -0.74
LINC00240-202ENST00000424968 KLHL34Q8N239 644 aa10.41□□□□□ -0.74
LINC00240-202ENST00000424968 TSHZ2Q9NRE2 1034 aa10.39□□□□□ -0.75
LINC00240-202ENST00000424968 C14orf37Q86TY3 774 aa10.37□□□□□ -0.75
LINC00240-202ENST00000424968 NPM1P06748 294 aaKnown RBP eCLIP10.35□□□□□ -0.75
LINC00240-202ENST00000424968 RANGAP1P46060 587 aaPredicted RBP10.33□□□□□ -0.76
LINC00240-202ENST00000424968 DNAJC5Q9H3Z4 198 aa10.33□□□□□ -0.76
LINC00240-202ENST00000424968 ABCB7O75027 752 aa10.26□□□□□ -0.77
LINC00240-202ENST00000424968 CHGAP10645 457 aaKnown RBP10.24□□□□□ -0.77
LINC00240-202ENST00000424968 DSG3P32926 999 aa10.23□□□□□ -0.77
LINC00240-202ENST00000424968 STAG3Q9UJ98 1225 aa10.23□□□□□ -0.77
LINC00240-202ENST00000424968 RGL2O15211 777 aa10.21□□□□□ -0.77
LINC00240-202ENST00000424968 MKRN4PQ13434 485 aaPredicted RBP10.19□□□□□ -0.78
LINC00240-202ENST00000424968 TRIM41Q8WV44 630 aa10.19□□□□□ -0.78
LINC00240-202ENST00000424968 POLA2Q14181 598 aa10.17□□□□□ -0.78
LINC00240-202ENST00000424968 PLCD3Q8N3E9 789 aa10.15□□□□□ -0.78
LINC00240-202ENST00000424968 ZBTB47Q9UFB7 747 aaPredicted RBP10.13□□□□□ -0.79
LINC00240-202ENST00000424968 PLEKHG5O94827 1062 aa10.12□□□□□ -0.79
LINC00240-202ENST00000424968 HS6ST3Q8IZP7 471 aa10.1□□□□□ -0.79
LINC00240-202ENST00000424968 ZBTB12Q9Y330 459 aaPredicted RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms