RNA–Protein interactions for RNA: ENST00000422202.5

COL20A1-203, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL20A1, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-203ENST00000422202 PRAC1Q96KF2 57 aa8.33□□□□□ -1.08
COL20A1-203ENST00000422202 LAMA2P24043 3122 aaKnown RBP8.32□□□□□ -1.08
COL20A1-203ENST00000422202 Q5W150 140 aa8.31□□□□□ -1.08
COL20A1-203ENST00000422202 PLAC8Q9NZF1 115 aa8.3□□□□□ -1.08
COL20A1-203ENST00000422202 HELZ2Q9BYK8 2649 aaKnown RBP8.3□□□□□ -1.08
COL20A1-203ENST00000422202 ROMO1P60602 79 aa8.29□□□□□ -1.08
COL20A1-203ENST00000422202 ADM2Q7Z4H4 148 aa8.29□□□□□ -1.08
COL20A1-203ENST00000422202 KRTAP1-3Q8IUG1 177 aa8.29□□□□□ -1.08
COL20A1-203ENST00000422202 REV3LO60673 3130 aa8.28□□□□□ -1.08
COL20A1-203ENST00000422202 ITPR3Q14573 2671 aa8.27□□□□□ -1.09
COL20A1-203ENST00000422202 A0A0C4DFX4 3053 aa8.27□□□□□ -1.09
COL20A1-203ENST00000422202 STAB1Q9NY15 2570 aa8.26□□□□□ -1.09
COL20A1-203ENST00000422202 FLNAP21333 2647 aaKnown RBP8.26□□□□□ -1.09
COL20A1-203ENST00000422202 LINC01558Q9Y6Z2 57 aa8.25□□□□□ -1.09
COL20A1-203ENST00000422202 MMP24-AS1A0A0U1RRL7 71 aa8.25□□□□□ -1.09
COL20A1-203ENST00000422202 RPL37P61927 97 aaKnown RBP8.25□□□□□ -1.09
COL20A1-203ENST00000422202 LCE6AA0A183 80 aa8.23□□□□□ -1.09
COL20A1-203ENST00000422202 OXTP01178 125 aa8.22□□□□□ -1.09
COL20A1-203ENST00000422202 DMBT1Q9UGM3 2413 aaPredicted RBP8.22□□□□□ -1.09
COL20A1-203ENST00000422202 CENPEQ02224 2701 aa8.21□□□□□ -1.1
COL20A1-203ENST00000422202 KRTAP1-1Q07627 177 aa8.2□□□□□ -1.1
COL20A1-203ENST00000422202 CELSR3Q9NYQ7 3312 aa8.2□□□□□ -1.1
COL20A1-203ENST00000422202 FREM2Q5SZK8 3169 aa8.19□□□□□ -1.1
COL20A1-203ENST00000422202 MKI67P46013 3256 aaKnown RBP8.19□□□□□ -1.1
COL20A1-203ENST00000422202 NBEAL1Q6ZS30 2694 aa8.16□□□□□ -1.1
COL20A1-203ENST00000422202 KRTAP16-1A8MUX0 517 aa8.15□□□□□ -1.1
COL20A1-203ENST00000422202 SPATA8Q6RVD6 105 aa8.15□□□□□ -1.1
COL20A1-203ENST00000422202 C20orf166-AS1Q96NR2 134 aa8.15□□□□□ -1.11
COL20A1-203ENST00000422202 SETXQ7Z333 2677 aaKnown RBP8.13□□□□□ -1.11
COL20A1-203ENST00000422202 TEX15Q9BXT5 2789 aa8.13□□□□□ -1.11
COL20A1-203ENST00000422202 RANBP2P49792 3224 aaKnown RBP8.13□□□□□ -1.11
COL20A1-203ENST00000422202 FP248Q71RG6 208 aaPredicted RBP8.13□□□□□ -1.11
COL20A1-203ENST00000422202 CHD6Q8TD26 2715 aa8.13□□□□□ -1.11
COL20A1-203ENST00000422202 KMT2BQ9UMN6 2715 aaPredicted RBP8.12□□□□□ -1.11
COL20A1-203ENST00000422202 Q5VV11 94 aa8.12□□□□□ -1.11
COL20A1-203ENST00000422202 KRTAP10-1P60331 282 aa8.12□□□□□ -1.11
COL20A1-203ENST00000422202 DNAH14Q0VDD8 3507 aa8.12□□□□□ -1.11
COL20A1-203ENST00000422202 KRTAP10-2P60368 255 aa8.09□□□□□ -1.11
COL20A1-203ENST00000422202 LINC00472Q9H8W2 130 aa8.08□□□□□ -1.12
COL20A1-203ENST00000422202 Q8NDZ9 215 aa8.07□□□□□ -1.12
COL20A1-203ENST00000422202 CHD7Q9P2D1 2997 aa8.04□□□□□ -1.12
COL20A1-203ENST00000422202 TRIOO75962 3097 aa8.03□□□□□ -1.12
COL20A1-203ENST00000422202 VPS13AQ96RL7 3174 aa8.02□□□□□ -1.13
COL20A1-203ENST00000422202 Q6ZR54 194 aa8.02□□□□□ -1.13
COL20A1-203ENST00000422202 KRTAP26-1Q6PEX3 210 aa8.02□□□□□ -1.13
COL20A1-203ENST00000422202 SPRR1AP35321 89 aa8.01□□□□□ -1.13
COL20A1-203ENST00000422202 BAHCC1Q9P281 2608 aa7.99□□□□□ -1.13
COL20A1-203ENST00000422202 TEP1Q99973 2627 aaKnown RBP7.99□□□□□ -1.13
COL20A1-203ENST00000422202 A8MUU9 505 aa7.98□□□□□ -1.13
COL20A1-203ENST00000422202 Q5XG85 94 aa7.98□□□□□ -1.13
COL20A1-203ENST00000422202 COL6A5A8TX70 2615 aa7.98□□□□□ -1.13
COL20A1-203ENST00000422202 KRTAP1-5Q9BYS1 174 aa7.98□□□□□ -1.13
COL20A1-203ENST00000422202 CDH23Q9H251 3354 aa7.97□□□□□ -1.13
COL20A1-203ENST00000422202 BRCA2P51587 3418 aa7.97□□□□□ -1.13
COL20A1-203ENST00000422202 PANO1I0J062 215 aa7.96□□□□□ -1.13
COL20A1-203ENST00000422202 TRANK1O15050 2925 aa7.96□□□□□ -1.14
COL20A1-203ENST00000422202 CYSTM1Q9H1C7 97 aa7.94□□□□□ -1.14
COL20A1-203ENST00000422202 UNC79Q9P2D8 2635 aa7.93□□□□□ -1.14
COL20A1-203ENST00000422202 SPRR1BP22528 89 aa7.92□□□□□ -1.14
COL20A1-203ENST00000422202 WDFY4Q6ZS81 3184 aa7.91□□□□□ -1.14
COL20A1-203ENST00000422202 MAP1AP78559 2803 aaPredicted RBP7.9□□□□□ -1.14
COL20A1-203ENST00000422202 A0A087X002 238 aa7.9□□□□□ -1.15
COL20A1-203ENST00000422202 UNC80Q8N2C7 3258 aa7.88□□□□□ -1.15
COL20A1-203ENST00000422202 STAB2Q8WWQ8 2551 aa7.88□□□□□ -1.15
COL20A1-203ENST00000422202 LAMA3Q16787 3333 aa7.87□□□□□ -1.15
COL20A1-203ENST00000422202 MGAQ8IWI9 3026 aa7.87□□□□□ -1.15
COL20A1-203ENST00000422202 PRUNE2Q8WUY3 3088 aa7.86□□□□□ -1.15
COL20A1-203ENST00000422202 ITPR2Q14571 2701 aa7.84□□□□□ -1.15
COL20A1-203ENST00000422202 NOTCH1P46531 2555 aa7.83□□□□□ -1.16
COL20A1-203ENST00000422202 CRYBG3Q68DQ2 2970 aa7.83□□□□□ -1.16
COL20A1-203ENST00000422202 C10orf95Q9H7T3 257 aa7.82□□□□□ -1.16
COL20A1-203ENST00000422202 A8MU10 97 aa7.81□□□□□ -1.16
COL20A1-203ENST00000422202 TNP1P09430 55 aa7.78□□□□□ -1.16
COL20A1-203ENST00000422202 GCN1Q92616 2671 aaKnown RBP7.78□□□□□ -1.16
COL20A1-203ENST00000422202 FRYQ5TBA9 3013 aa7.78□□□□□ -1.16
COL20A1-203ENST00000422202 ASB16-AS1Q495Z4 193 aa7.78□□□□□ -1.16
COL20A1-203ENST00000422202 SZT2Q5T011 3432 aa7.76□□□□□ -1.17
COL20A1-203ENST00000422202 APCP25054 2843 aa7.76□□□□□ -1.17
COL20A1-203ENST00000422202 DSPP15924 2871 aaKnown RBP7.75□□□□□ -1.17
COL20A1-203ENST00000422202 ZNF292O60281 2723 aa7.74□□□□□ -1.17
COL20A1-203ENST00000422202 KRTAP25-1Q3LHN0 102 aa7.73□□□□□ -1.17
COL20A1-203ENST00000422202 SPEGQ15772 3267 aa7.73□□□□□ -1.17
COL20A1-203ENST00000422202 HTTP42858 3142 aa7.73□□□□□ -1.17
COL20A1-203ENST00000422202 COL6A3P12111 3177 aa7.72□□□□□ -1.17
COL20A1-203ENST00000422202 NOTCH2NLQ7Z3S9 236 aa7.72□□□□□ -1.17
COL20A1-203ENST00000422202 P0C880 135 aa7.7□□□□□ -1.18
COL20A1-203ENST00000422202 CHD9Q3L8U1 2897 aa7.7□□□□□ -1.18
COL20A1-203ENST00000422202 NDUFAF8A1L188 74 aa7.7□□□□□ -1.18
COL20A1-203ENST00000422202 KRTAP10-8P60410 259 aa7.66□□□□□ -1.18
COL20A1-203ENST00000422202 FRYLO94915 3013 aa7.66□□□□□ -1.18
COL20A1-203ENST00000422202 ASH1LQ9NR48 2969 aaKnown RBP7.65□□□□□ -1.19
COL20A1-203ENST00000422202 KALRNO60229 2985 aa7.64□□□□□ -1.19
COL20A1-203ENST00000422202 CFAP47Q6ZTR5 3102 aa7.63□□□□□ -1.19
COL20A1-203ENST00000422202 USP34Q70CQ2 3546 aa7.62□□□□□ -1.19
COL20A1-203ENST00000422202 NBEAL2Q6ZNJ1 2754 aa7.62□□□□□ -1.19
COL20A1-203ENST00000422202 RPS29P62273 56 aaKnown RBP7.62□□□□□ -1.19
COL20A1-203ENST00000422202 KRTAP4-16G5E9R7 235 aaPredicted RBP7.61□□□□□ -1.19
COL20A1-203ENST00000422202 UTP20O75691 2785 aaKnown RBP7.6□□□□□ -1.19
COL20A1-203ENST00000422202 NSD1Q96L73 2696 aaPredicted RBP7.6□□□□□ -1.19
COL20A1-203ENST00000422202 A0A1B0GVY2 172 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms