RNA–Protein interactions for RNA: ENST00000419533.1

UBR4-206, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 5,583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-206ENST00000419533 FRYLO94915 3013 aa5.38□□□□□ -1.55
UBR4-206ENST00000419533 IGLV8-61A0A075B6I0 122 aa5.37□□□□□ -1.55
UBR4-206ENST00000419533 STAB1Q9NY15 2570 aa5.37□□□□□ -1.55
UBR4-206ENST00000419533 A0A0G2JQZ4 141 aa5.37□□□□□ -1.55
UBR4-206ENST00000419533 COA5Q86WW8 74 aa5.37□□□□□ -1.55
UBR4-206ENST00000419533 VCANP13611 3396 aa5.36□□□□□ -1.55
UBR4-206ENST00000419533 HIVEP1P15822 2718 aa5.36□□□□□ -1.55
UBR4-206ENST00000419533 CD164Q04900 197 aa5.36□□□□□ -1.55
UBR4-206ENST00000419533 LAMA1P25391 3075 aa5.34□□□□□ -1.55
UBR4-206ENST00000419533 VPS13AQ96RL7 3174 aa5.33□□□□□ -1.56
UBR4-206ENST00000419533 ITPR2Q14571 2701 aa5.33□□□□□ -1.56
UBR4-206ENST00000419533 A0A1W2PNM2 257 aa5.33□□□□□ -1.56
UBR4-206ENST00000419533 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.33□□□□□ -1.56
UBR4-206ENST00000419533 APCP25054 2843 aa5.32□□□□□ -1.56
UBR4-206ENST00000419533 TEX15Q9BXT5 2789 aa5.32□□□□□ -1.56
UBR4-206ENST00000419533 ITPR1Q14643 2758 aa5.32□□□□□ -1.56
UBR4-206ENST00000419533 IGLV5-48A0A075B6I7 105 aa5.32□□□□□ -1.56
UBR4-206ENST00000419533 FAM229BQ4G0N7 80 aa5.32□□□□□ -1.56
UBR4-206ENST00000419533 IGLV7-46A0A075B6I9 117 aa5.31□□□□□ -1.56
UBR4-206ENST00000419533 UQCR11O14957 56 aa5.31□□□□□ -1.56
UBR4-206ENST00000419533 Q6ZSA8 131 aa5.31□□□□□ -1.56
UBR4-206ENST00000419533 PLAC8Q9NZF1 115 aa5.31□□□□□ -1.56
UBR4-206ENST00000419533 KTN1-AS1Q86SY8 53 aa5.3□□□□□ -1.56
UBR4-206ENST00000419533 PRR26Q8N8Z3 221 aa5.3□□□□□ -1.56
UBR4-206ENST00000419533 UTP20O75691 2785 aaKnown RBP5.29□□□□□ -1.56
UBR4-206ENST00000419533 NSD1Q96L73 2696 aaPredicted RBP5.26□□□□□ -1.57
UBR4-206ENST00000419533 USP34Q70CQ2 3546 aa5.26□□□□□ -1.57
UBR4-206ENST00000419533 Q5XG85 94 aa5.26□□□□□ -1.57
UBR4-206ENST00000419533 SPANXA2-OT1Q8N9U9 137 aa5.26□□□□□ -1.57
UBR4-206ENST00000419533 FAM104AQ969W3 186 aa5.26□□□□□ -1.57
UBR4-206ENST00000419533 ATMQ13315 3056 aa5.26□□□□□ -1.57
UBR4-206ENST00000419533 KALRNO60229 2985 aa5.25□□□□□ -1.57
UBR4-206ENST00000419533 OCR1Q9BZK8 76 aa5.25□□□□□ -1.57
UBR4-206ENST00000419533 ASH1LQ9NR48 2969 aaKnown RBP5.25□□□□□ -1.57
UBR4-206ENST00000419533 COL12A1Q99715 3063 aa5.25□□□□□ -1.57
UBR4-206ENST00000419533 MIR22HGQ0VDD5 57 aa5.25□□□□□ -1.57
UBR4-206ENST00000419533 Q1T7F1 81 aa5.25□□□□□ -1.57
UBR4-206ENST00000419533 Q8N1X5 172 aa5.24□□□□□ -1.57
UBR4-206ENST00000419533 NBEAQ8NFP9 2946 aa5.24□□□□□ -1.57
UBR4-206ENST00000419533 LCA10Q71F78 164 aa5.23□□□□□ -1.57
UBR4-206ENST00000419533 CRIPTQ9P021 101 aa5.23□□□□□ -1.57
UBR4-206ENST00000419533 CYSTM1Q9H1C7 97 aa5.23□□□□□ -1.57
UBR4-206ENST00000419533 TENM4Q6N022 2769 aa5.22□□□□□ -1.57
UBR4-206ENST00000419533 CDC42SE1Q9NRR8 79 aa5.21□□□□□ -1.57
UBR4-206ENST00000419533 LINC01554Q52M75 96 aa5.21□□□□□ -1.58
UBR4-206ENST00000419533 SPINT4Q6UDR6 99 aa5.21□□□□□ -1.58
UBR4-206ENST00000419533 M0R2T5 61 aa5.2□□□□□ -1.58
UBR4-206ENST00000419533 SPRR1AP35321 89 aa5.2□□□□□ -1.58
UBR4-206ENST00000419533 Q5VSD8 79 aa5.2□□□□□ -1.58
UBR4-206ENST00000419533 FP248Q71RG6 208 aaPredicted RBP5.19□□□□□ -1.58
UBR4-206ENST00000419533 FREM2Q5SZK8 3169 aa5.19□□□□□ -1.58
UBR4-206ENST00000419533 Q6ZR54 194 aa5.17□□□□□ -1.58
UBR4-206ENST00000419533 KRTAP1-5Q9BYS1 174 aa5.17□□□□□ -1.58
UBR4-206ENST00000419533 ZCCHC13Q8WW36 166 aaKnown RBP5.16□□□□□ -1.58
UBR4-206ENST00000419533 BOD1L1Q8NFC6 3051 aa5.16□□□□□ -1.58
UBR4-206ENST00000419533 SPRR1BP22528 89 aa5.16□□□□□ -1.58
UBR4-206ENST00000419533 A0A0D9SG42 100 aa5.15□□□□□ -1.58
UBR4-206ENST00000419533 SEC61BP60468 96 aaKnown RBP5.15□□□□□ -1.58
UBR4-206ENST00000419533 DNAH14Q0VDD8 3507 aa5.15□□□□□ -1.59
UBR4-206ENST00000419533 KRTAP10-1P60331 282 aa5.14□□□□□ -1.59
UBR4-206ENST00000419533 NOTCH1P46531 2555 aa5.14□□□□□ -1.59
UBR4-206ENST00000419533 OXTP01178 125 aa5.14□□□□□ -1.59
UBR4-206ENST00000419533 Q75L30 129 aa5.13□□□□□ -1.59
UBR4-206ENST00000419533 MYO15AQ9UKN7 3530 aa5.13□□□□□ -1.59
UBR4-206ENST00000419533 KRTAP26-1Q6PEX3 210 aa5.13□□□□□ -1.59
UBR4-206ENST00000419533 KRTAP10-2P60368 255 aa5.12□□□□□ -1.59
UBR4-206ENST00000419533 HRES1P13985 223 aa5.12□□□□□ -1.59
UBR4-206ENST00000419533 MAP1AP78559 2803 aaPredicted RBP5.12□□□□□ -1.59
UBR4-206ENST00000419533 MMP24-AS1A0A0U1RRL7 71 aa5.12□□□□□ -1.59
UBR4-206ENST00000419533 CELSR3Q9NYQ7 3312 aa5.12□□□□□ -1.59
UBR4-206ENST00000419533 CSAG1Q6PB30 78 aa5.12□□□□□ -1.59
UBR4-206ENST00000419533 Q8NDZ9 215 aa5.12□□□□□ -1.59
UBR4-206ENST00000419533 S4R3F8 94 aa5.1□□□□□ -1.59
UBR4-206ENST00000419533 NBEAL1Q6ZS30 2694 aa5.1□□□□□ -1.59
UBR4-206ENST00000419533 CAMK2N1Q7Z7J9 78 aa5.1□□□□□ -1.59
UBR4-206ENST00000419533 Q8N9P0 234 aaPredicted RBP5.1□□□□□ -1.59
UBR4-206ENST00000419533 PDZD2O15018 2839 aa5.09□□□□□ -1.59
UBR4-206ENST00000419533 LINC00472Q9H8W2 130 aa5.07□□□□□ -1.6
UBR4-206ENST00000419533 DCHS1Q96JQ0 3298 aa5.07□□□□□ -1.6
UBR4-206ENST00000419533 A0A1B0GU33 70 aa5.07□□□□□ -1.6
UBR4-206ENST00000419533 LINC00483Q53H64 154 aa5.06□□□□□ -1.6
UBR4-206ENST00000419533 LINC01558Q9Y6Z2 57 aa5.06□□□□□ -1.6
UBR4-206ENST00000419533 ADGRG4Q8IZF6 3080 aa5.06□□□□□ -1.6
UBR4-206ENST00000419533 HRNRQ86YZ3 2850 aaPredicted RBP5.06□□□□□ -1.6
UBR4-206ENST00000419533 ZZEF1O43149 2961 aa5.06□□□□□ -1.6
UBR4-206ENST00000419533 Q5VV11 94 aa5.06□□□□□ -1.6
UBR4-206ENST00000419533 SPINK7P58062 85 aa5.06□□□□□ -1.6
UBR4-206ENST00000419533 CFAP47Q6ZTR5 3102 aa5.05□□□□□ -1.6
UBR4-206ENST00000419533 CELSR2Q9HCU4 2923 aa5.05□□□□□ -1.6
UBR4-206ENST00000419533 MUC3AQ02505 3323 aa5.05□□□□□ -1.6
UBR4-206ENST00000419533 LRBAP50851 2863 aa5.05□□□□□ -1.6
UBR4-206ENST00000419533 Q5W150 140 aa5.05□□□□□ -1.6
UBR4-206ENST00000419533 TACC2O95359 2948 aa5.03□□□□□ -1.6
UBR4-206ENST00000419533 FBN2P35556 2912 aa5.02□□□□□ -1.61
UBR4-206ENST00000419533 LOC400499M0QZD8 3231 aa5.01□□□□□ -1.61
UBR4-206ENST00000419533 DMAC1Q96GE9 116 aa5□□□□□ -1.61
UBR4-206ENST00000419533 Q6ZRN7 208 aaPredicted RBP4.99□□□□□ -1.61
UBR4-206ENST00000419533 PANO1I0J062 215 aa4.99□□□□□ -1.61
UBR4-206ENST00000419533 R4GN34 69 aa4.98□□□□□ -1.61
UBR4-206ENST00000419533 PRAC1Q96KF2 57 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms