RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 SSBP3-AS1Q7Z2R9 100 aa7.61□□□□□ -1.19
CDC42BPA-202ENST00000366764 SPINK1P00995 79 aa7.6□□□□□ -1.19
CDC42BPA-202ENST00000366764 KRTAP10-11P60412 298 aa7.6□□□□□ -1.19
CDC42BPA-202ENST00000366764 UQCR11O14957 56 aa7.59□□□□□ -1.19
CDC42BPA-202ENST00000366764 ZNF861PO60384 105 aa7.59□□□□□ -1.19
CDC42BPA-202ENST00000366764 CDH23Q9H251 3354 aa7.59□□□□□ -1.19
CDC42BPA-202ENST00000366764 ATMQ13315 3056 aa7.59□□□□□ -1.19
CDC42BPA-202ENST00000366764 RETNLBQ9BQ08 111 aa7.59□□□□□ -1.19
CDC42BPA-202ENST00000366764 KTN1-AS1Q86SY8 53 aa7.58□□□□□ -1.2
CDC42BPA-202ENST00000366764 KRTAP10-3P60369 221 aa7.58□□□□□ -1.2
CDC42BPA-202ENST00000366764 SPACA4Q8TDM5 124 aa7.57□□□□□ -1.2
CDC42BPA-202ENST00000366764 DMXL2Q8TDJ6 3036 aa7.56□□□□□ -1.2
CDC42BPA-202ENST00000366764 MXRA5Q9NR99 2828 aa7.55□□□□□ -1.2
CDC42BPA-202ENST00000366764 DSCR10P59022 87 aa7.55□□□□□ -1.2
CDC42BPA-202ENST00000366764 SPRR1AP35321 89 aa7.54□□□□□ -1.2
CDC42BPA-202ENST00000366764 CDC42SE1Q9NRR8 79 aa7.53□□□□□ -1.2
CDC42BPA-202ENST00000366764 FBN2P35556 2912 aa7.53□□□□□ -1.2
CDC42BPA-202ENST00000366764 K7EIL1 84 aa7.53□□□□□ -1.2
CDC42BPA-202ENST00000366764 COL12A1Q99715 3063 aa7.53□□□□□ -1.2
CDC42BPA-202ENST00000366764 Q5XG85 94 aa7.52□□□□□ -1.21
CDC42BPA-202ENST00000366764 TYMSOSQ8TAI1 123 aa7.51□□□□□ -1.21
CDC42BPA-202ENST00000366764 IGLV8-61A0A075B6I0 122 aa7.51□□□□□ -1.21
CDC42BPA-202ENST00000366764 TNRC18O15417 2968 aaPredicted RBP7.5□□□□□ -1.21
CDC42BPA-202ENST00000366764 DCHS2Q6V1P9 2916 aa7.49□□□□□ -1.21
CDC42BPA-202ENST00000366764 FREM2Q5SZK8 3169 aa7.49□□□□□ -1.21
CDC42BPA-202ENST00000366764 IGLV7-46A0A075B6I9 117 aa7.49□□□□□ -1.21
CDC42BPA-202ENST00000366764 CELSR3Q9NYQ7 3312 aa7.48□□□□□ -1.21
CDC42BPA-202ENST00000366764 VCANP13611 3396 aa7.48□□□□□ -1.21
CDC42BPA-202ENST00000366764 A0A1W2PNN7 141 aa7.48□□□□□ -1.21
CDC42BPA-202ENST00000366764 Q75L30 129 aa7.48□□□□□ -1.21
CDC42BPA-202ENST00000366764 DNAH14Q0VDD8 3507 aa7.47□□□□□ -1.21
CDC42BPA-202ENST00000366764 A0A087WTM6 91 aa7.47□□□□□ -1.21
CDC42BPA-202ENST00000366764 MIR22HGQ0VDD5 57 aa7.47□□□□□ -1.21
CDC42BPA-202ENST00000366764 CYSTM1Q9H1C7 97 aa7.47□□□□□ -1.21
CDC42BPA-202ENST00000366764 Q8NDZ9 215 aa7.46□□□□□ -1.22
CDC42BPA-202ENST00000366764 FP248Q71RG6 208 aaPredicted RBP7.46□□□□□ -1.22
CDC42BPA-202ENST00000366764 SPRR1BP22528 89 aa7.44□□□□□ -1.22
CDC42BPA-202ENST00000366764 Q96NJ1 140 aa7.44□□□□□ -1.22
CDC42BPA-202ENST00000366764 LCA10Q71F78 164 aa7.43□□□□□ -1.22
CDC42BPA-202ENST00000366764 PSORS1C2Q9UIG4 136 aa7.43□□□□□ -1.22
CDC42BPA-202ENST00000366764 IGLV7-43P04211 117 aa7.43□□□□□ -1.22
CDC42BPA-202ENST00000366764 CASC10Q5T4H9 136 aa7.43□□□□□ -1.22
CDC42BPA-202ENST00000366764 APLNQ9ULZ1 77 aa7.42□□□□□ -1.22
CDC42BPA-202ENST00000366764 A0A0G2JQZ4 141 aa7.42□□□□□ -1.22
CDC42BPA-202ENST00000366764 PLA2G1BP04054 148 aaKnown RBP7.41□□□□□ -1.22
CDC42BPA-202ENST00000366764 COL6A3P12111 3177 aa7.4□□□□□ -1.23
CDC42BPA-202ENST00000366764 Q8N9P0 234 aaPredicted RBP7.39□□□□□ -1.23
CDC42BPA-202ENST00000366764 LINC00304Q8N9R0 145 aa7.39□□□□□ -1.23
CDC42BPA-202ENST00000366764 SZT2Q5T011 3432 aa7.39□□□□□ -1.23
CDC42BPA-202ENST00000366764 USP34Q70CQ2 3546 aa7.38□□□□□ -1.23
CDC42BPA-202ENST00000366764 CRYBG3Q68DQ2 2970 aa7.37□□□□□ -1.23
CDC42BPA-202ENST00000366764 LINC00472Q9H8W2 130 aa7.37□□□□□ -1.23
CDC42BPA-202ENST00000366764 TNP2Q05952 138 aa7.36□□□□□ -1.23
CDC42BPA-202ENST00000366764 WWC2-AS2Q96NR7 200 aa7.36□□□□□ -1.23
CDC42BPA-202ENST00000366764 MMP24-AS1A0A0U1RRL7 71 aa7.36□□□□□ -1.23
CDC42BPA-202ENST00000366764 FAM229BQ4G0N7 80 aa7.36□□□□□ -1.23
CDC42BPA-202ENST00000366764 KRTAP26-1Q6PEX3 210 aa7.36□□□□□ -1.23
CDC42BPA-202ENST00000366764 LINC01558Q9Y6Z2 57 aa7.35□□□□□ -1.23
CDC42BPA-202ENST00000366764 REV3LO60673 3130 aa7.33□□□□□ -1.24
CDC42BPA-202ENST00000366764 OXTP01178 125 aa7.32□□□□□ -1.24
CDC42BPA-202ENST00000366764 KRTAP4-16G5E9R7 235 aaPredicted RBP7.31□□□□□ -1.24
CDC42BPA-202ENST00000366764 DMXL1Q9Y485 3027 aa7.3□□□□□ -1.24
CDC42BPA-202ENST00000366764 TENM3Q9P273 2699 aa7.3□□□□□ -1.24
CDC42BPA-202ENST00000366764 Q5VV11 94 aa7.29□□□□□ -1.24
CDC42BPA-202ENST00000366764 SPTBN5Q9NRC6 3674 aaKnown RBP7.29□□□□□ -1.24
CDC42BPA-202ENST00000366764 CFAP47Q6ZTR5 3102 aa7.28□□□□□ -1.24
CDC42BPA-202ENST00000366764 PLAC8Q9NZF1 115 aa7.27□□□□□ -1.25
CDC42BPA-202ENST00000366764 ZCCHC13Q8WW36 166 aaKnown RBP7.26□□□□□ -1.25
CDC42BPA-202ENST00000366764 PRR26Q8N8Z3 221 aa7.26□□□□□ -1.25
CDC42BPA-202ENST00000366764 TENM1Q9UKZ4 2725 aa7.26□□□□□ -1.25
CDC42BPA-202ENST00000366764 ANAPC11Q9NYG5 84 aa7.26□□□□□ -1.25
CDC42BPA-202ENST00000366764 HRES1P13985 223 aa7.25□□□□□ -1.25
CDC42BPA-202ENST00000366764 LCE6AA0A183 80 aa7.23□□□□□ -1.25
CDC42BPA-202ENST00000366764 Q6ZR54 194 aa7.23□□□□□ -1.25
CDC42BPA-202ENST00000366764 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.23□□□□□ -1.25
CDC42BPA-202ENST00000366764 CRIPTQ9P021 101 aa7.22□□□□□ -1.25
CDC42BPA-202ENST00000366764 RBM12B-AS1Q9P1G2 102 aa7.22□□□□□ -1.25
CDC42BPA-202ENST00000366764 LINC00483Q53H64 154 aa7.21□□□□□ -1.25
CDC42BPA-202ENST00000366764 TENM4Q6N022 2769 aa7.21□□□□□ -1.26
CDC42BPA-202ENST00000366764 EYSQ5T1H1 3165 aa7.2□□□□□ -1.26
CDC42BPA-202ENST00000366764 KRTAP29-1A8MX34 341 aaPredicted RBP7.2□□□□□ -1.26
CDC42BPA-202ENST00000366764 ASB16-AS1Q495Z4 193 aa7.2□□□□□ -1.26
CDC42BPA-202ENST00000366764 PDZD2O15018 2839 aa7.18□□□□□ -1.26
CDC42BPA-202ENST00000366764 SPINT4Q6UDR6 99 aa7.18□□□□□ -1.26
CDC42BPA-202ENST00000366764 DMAC1Q96GE9 116 aa7.17□□□□□ -1.26
CDC42BPA-202ENST00000366764 Q5W150 140 aa7.15□□□□□ -1.26
CDC42BPA-202ENST00000366764 Q8N1X5 172 aa7.14□□□□□ -1.27
CDC42BPA-202ENST00000366764 A0A1B0GU33 70 aa7.14□□□□□ -1.27
CDC42BPA-202ENST00000366764 KRTAP1-5Q9BYS1 174 aa7.13□□□□□ -1.27
CDC42BPA-202ENST00000366764 LINC01554Q52M75 96 aa7.12□□□□□ -1.27
CDC42BPA-202ENST00000366764 VWFP04275 2813 aa7.11□□□□□ -1.27
CDC42BPA-202ENST00000366764 LOC400499M0QZD8 3231 aa7.11□□□□□ -1.27
CDC42BPA-202ENST00000366764 C9orf92A6NGG3 77 aa7.1□□□□□ -1.27
CDC42BPA-202ENST00000366764 SPINK7P58062 85 aa7.07□□□□□ -1.28
CDC42BPA-202ENST00000366764 TGP01266 2768 aa7.04□□□□□ -1.28
CDC42BPA-202ENST00000366764 CELSR1Q9NYQ6 3014 aa7.01□□□□□ -1.29
CDC42BPA-202ENST00000366764 MYO15AQ9UKN7 3530 aa6.98□□□□□ -1.29
CDC42BPA-202ENST00000366764 SPEGQ15772 3267 aa6.95□□□□□ -1.3
CDC42BPA-202ENST00000366764 SPATA8Q6RVD6 105 aa6.95□□□□□ -1.3
CDC42BPA-202ENST00000366764 SMR3BP02814 79 aaPredicted RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms