RNA–Protein interactions for RNA: ENST00000357559.8

FXR1-202, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FXR1, Length 8,711 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-202ENST00000357559 FP248Q71RG6 208 aaPredicted RBP6.42□□□□□ -1.38
FXR1-202ENST00000357559 KLK9Q2XQG4 91 aa6.41□□□□□ -1.38
FXR1-202ENST00000357559 EPG5Q9HCE0 2579 aa6.41□□□□□ -1.38
FXR1-202ENST00000357559 CYSTM1Q9H1C7 97 aa6.4□□□□□ -1.38
FXR1-202ENST00000357559 RPL37P61927 97 aaKnown RBP6.4□□□□□ -1.39
FXR1-202ENST00000357559 CELSR3Q9NYQ7 3312 aa6.38□□□□□ -1.39
FXR1-202ENST00000357559 AKAP13Q12802 2813 aa6.38□□□□□ -1.39
FXR1-202ENST00000357559 MKI67P46013 3256 aaKnown RBP6.38□□□□□ -1.39
FXR1-202ENST00000357559 CFAP46Q8IYW2 2715 aa6.38□□□□□ -1.39
FXR1-202ENST00000357559 C20orf166-AS1Q96NR2 134 aa6.38□□□□□ -1.39
FXR1-202ENST00000357559 Q5XG85 94 aa6.38□□□□□ -1.39
FXR1-202ENST00000357559 KRTAP1-3Q8IUG1 177 aa6.37□□□□□ -1.39
FXR1-202ENST00000357559 LAMA2P24043 3122 aaKnown RBP6.37□□□□□ -1.39
FXR1-202ENST00000357559 FREM2Q5SZK8 3169 aa6.36□□□□□ -1.39
FXR1-202ENST00000357559 PLAC8Q9NZF1 115 aa6.36□□□□□ -1.39
FXR1-202ENST00000357559 REV3LO60673 3130 aa6.35□□□□□ -1.39
FXR1-202ENST00000357559 A0A0C4DFX4 3053 aa6.35□□□□□ -1.39
FXR1-202ENST00000357559 Q8NDZ9 215 aa6.35□□□□□ -1.39
FXR1-202ENST00000357559 HECTD1Q9ULT8 2610 aa6.34□□□□□ -1.39
FXR1-202ENST00000357559 KRTAP1-1Q07627 177 aa6.32□□□□□ -1.4
FXR1-202ENST00000357559 KRTAP10-2P60368 255 aa6.29□□□□□ -1.4
FXR1-202ENST00000357559 FLNAP21333 2647 aaKnown RBP6.29□□□□□ -1.4
FXR1-202ENST00000357559 ATRQ13535 2644 aa6.29□□□□□ -1.4
FXR1-202ENST00000357559 KRTAP10-1P60331 282 aa6.29□□□□□ -1.4
FXR1-202ENST00000357559 DNAH14Q0VDD8 3507 aa6.28□□□□□ -1.4
FXR1-202ENST00000357559 ITPR3Q14573 2671 aa6.28□□□□□ -1.4
FXR1-202ENST00000357559 LINC00472Q9H8W2 130 aa6.27□□□□□ -1.4
FXR1-202ENST00000357559 RANBP2P49792 3224 aaKnown RBP6.26□□□□□ -1.41
FXR1-202ENST00000357559 KRTAP26-1Q6PEX3 210 aa6.26□□□□□ -1.41
FXR1-202ENST00000357559 KRTAP16-1A8MUX0 517 aa6.25□□□□□ -1.41
FXR1-202ENST00000357559 TRIOO75962 3097 aa6.25□□□□□ -1.41
FXR1-202ENST00000357559 DMBT1Q9UGM3 2413 aaPredicted RBP6.25□□□□□ -1.41
FXR1-202ENST00000357559 Q6ZR54 194 aa6.24□□□□□ -1.41
FXR1-202ENST00000357559 KRTAP1-5Q9BYS1 174 aa6.23□□□□□ -1.41
FXR1-202ENST00000357559 NBEAL1Q6ZS30 2694 aa6.23□□□□□ -1.41
FXR1-202ENST00000357559 CHD6Q8TD26 2715 aa6.23□□□□□ -1.41
FXR1-202ENST00000357559 A8MU10 97 aa6.21□□□□□ -1.42
FXR1-202ENST00000357559 MAST4O15021 2626 aa6.21□□□□□ -1.42
FXR1-202ENST00000357559 BRCA2P51587 3418 aa6.2□□□□□ -1.42
FXR1-202ENST00000357559 SPRR1AP35321 89 aa6.17□□□□□ -1.42
FXR1-202ENST00000357559 A8MUU9 505 aa6.17□□□□□ -1.42
FXR1-202ENST00000357559 TEX15Q9BXT5 2789 aa6.17□□□□□ -1.42
FXR1-202ENST00000357559 PANO1I0J062 215 aa6.17□□□□□ -1.42
FXR1-202ENST00000357559 C10orf95Q9H7T3 257 aa6.16□□□□□ -1.42
FXR1-202ENST00000357559 VPS13AQ96RL7 3174 aa6.16□□□□□ -1.42
FXR1-202ENST00000357559 CENPEQ02224 2701 aa6.16□□□□□ -1.42
FXR1-202ENST00000357559 OXTP01178 125 aa6.16□□□□□ -1.42
FXR1-202ENST00000357559 FLNBO75369 2602 aaKnown RBP6.16□□□□□ -1.42
FXR1-202ENST00000357559 A0A087X002 238 aa6.16□□□□□ -1.42
FXR1-202ENST00000357559 STAB1Q9NY15 2570 aa6.15□□□□□ -1.42
FXR1-202ENST00000357559 NDUFAF8A1L188 74 aa6.13□□□□□ -1.43
FXR1-202ENST00000357559 LCE6AA0A183 80 aa6.13□□□□□ -1.43
FXR1-202ENST00000357559 LAMA3Q16787 3333 aa6.12□□□□□ -1.43
FXR1-202ENST00000357559 CDH23Q9H251 3354 aa6.11□□□□□ -1.43
FXR1-202ENST00000357559 NOTCH2NLQ7Z3S9 236 aa6.11□□□□□ -1.43
FXR1-202ENST00000357559 SZT2Q5T011 3432 aa6.11□□□□□ -1.43
FXR1-202ENST00000357559 SPRR1BP22528 89 aa6.1□□□□□ -1.43
FXR1-202ENST00000357559 PRUNE2Q8WUY3 3088 aa6.09□□□□□ -1.43
FXR1-202ENST00000357559 KRTAP25-1Q3LHN0 102 aa6.08□□□□□ -1.44
FXR1-202ENST00000357559 COL6A5A8TX70 2615 aa6.08□□□□□ -1.44
FXR1-202ENST00000357559 HELZ2Q9BYK8 2649 aaKnown RBP6.08□□□□□ -1.44
FXR1-202ENST00000357559 UNC80Q8N2C7 3258 aa6.07□□□□□ -1.44
FXR1-202ENST00000357559 MGAQ8IWI9 3026 aa6.05□□□□□ -1.44
FXR1-202ENST00000357559 WDFY4Q6ZS81 3184 aa6.03□□□□□ -1.44
FXR1-202ENST00000357559 STAB2Q8WWQ8 2551 aa6.03□□□□□ -1.44
FXR1-202ENST00000357559 CRYBG3Q68DQ2 2970 aa6.02□□□□□ -1.45
FXR1-202ENST00000357559 GCN1Q92616 2671 aaKnown RBP6.01□□□□□ -1.45
FXR1-202ENST00000357559 UNC79Q9P2D8 2635 aa6□□□□□ -1.45
FXR1-202ENST00000357559 COL6A3P12111 3177 aa6□□□□□ -1.45
FXR1-202ENST00000357559 FRYQ5TBA9 3013 aa6□□□□□ -1.45
FXR1-202ENST00000357559 CHD7Q9P2D1 2997 aa5.99□□□□□ -1.45
FXR1-202ENST00000357559 TNP1P09430 55 aa5.99□□□□□ -1.45
FXR1-202ENST00000357559 SPEGQ15772 3267 aa5.98□□□□□ -1.45
FXR1-202ENST00000357559 CFAP47Q6ZTR5 3102 aa5.98□□□□□ -1.45
FXR1-202ENST00000357559 A0A1B0GVY2 172 aa5.98□□□□□ -1.45
FXR1-202ENST00000357559 KRTAP11-1Q8IUC1 163 aa5.95□□□□□ -1.46
FXR1-202ENST00000357559 KRTAP10-8P60410 259 aa5.95□□□□□ -1.46
FXR1-202ENST00000357559 NBEAL2Q6ZNJ1 2754 aa5.94□□□□□ -1.46
FXR1-202ENST00000357559 KALRNO60229 2985 aa5.93□□□□□ -1.46
FXR1-202ENST00000357559 TEP1Q99973 2627 aaKnown RBP5.93□□□□□ -1.46
FXR1-202ENST00000357559 KRTAP29-1A8MX34 341 aaPredicted RBP5.92□□□□□ -1.46
FXR1-202ENST00000357559 APCP25054 2843 aa5.92□□□□□ -1.46
FXR1-202ENST00000357559 HTTP42858 3142 aa5.92□□□□□ -1.46
FXR1-202ENST00000357559 NOTCH1P46531 2555 aa5.91□□□□□ -1.46
FXR1-202ENST00000357559 DSPP15924 2871 aaKnown RBP5.91□□□□□ -1.46
FXR1-202ENST00000357559 ASB16-AS1Q495Z4 193 aa5.91□□□□□ -1.46
FXR1-202ENST00000357559 A6NN06 94 aa5.9□□□□□ -1.46
FXR1-202ENST00000357559 MAP1AP78559 2803 aaPredicted RBP5.9□□□□□ -1.46
FXR1-202ENST00000357559 KRTAP4-16G5E9R7 235 aaPredicted RBP5.9□□□□□ -1.47
FXR1-202ENST00000357559 VCANP13611 3396 aa5.89□□□□□ -1.47
FXR1-202ENST00000357559 TRANK1O15050 2925 aa5.86□□□□□ -1.47
FXR1-202ENST00000357559 ITPR2Q14571 2701 aa5.86□□□□□ -1.47
FXR1-202ENST00000357559 LRBAP50851 2863 aa5.86□□□□□ -1.47
FXR1-202ENST00000357559 ASH1LQ9NR48 2969 aaKnown RBP5.85□□□□□ -1.47
FXR1-202ENST00000357559 USP34Q70CQ2 3546 aa5.83□□□□□ -1.48
FXR1-202ENST00000357559 KRTAP13-2Q52LG2 175 aa5.82□□□□□ -1.48
FXR1-202ENST00000357559 LAMA1P25391 3075 aa5.81□□□□□ -1.48
FXR1-202ENST00000357559 SETXQ7Z333 2677 aaKnown RBP5.8□□□□□ -1.48
FXR1-202ENST00000357559 DMXL2Q8TDJ6 3036 aa5.8□□□□□ -1.48
FXR1-202ENST00000357559 NSD1Q96L73 2696 aaPredicted RBP5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 127.9 ms