RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 KRTAP10-2P60368 255 aa7.47□□□□□ -1.21
SLX4-201ENST00000294008 LCE6AA0A183 80 aa7.47□□□□□ -1.21
SLX4-201ENST00000294008 FASNP49327 2511 aaKnown RBP7.45□□□□□ -1.22
SLX4-201ENST00000294008 KRTAP16-1A8MUX0 517 aa7.44□□□□□ -1.22
SLX4-201ENST00000294008 C10orf95Q9H7T3 257 aa7.43□□□□□ -1.22
SLX4-201ENST00000294008 CEP295Q9C0D2 2601 aa7.42□□□□□ -1.22
SLX4-201ENST00000294008 MKI67P46013 3256 aaKnown RBP7.41□□□□□ -1.22
SLX4-201ENST00000294008 A0A096LNT2 108 aa7.41□□□□□ -1.22
SLX4-201ENST00000294008 A8MUU9 505 aa7.4□□□□□ -1.22
SLX4-201ENST00000294008 SPRR1BP22528 89 aa7.39□□□□□ -1.23
SLX4-201ENST00000294008 BPTFQ12830 3046 aa7.39□□□□□ -1.23
SLX4-201ENST00000294008 Q5VV11 94 aa7.38□□□□□ -1.23
SLX4-201ENST00000294008 KRTAP1-3Q8IUG1 177 aa7.37□□□□□ -1.23
SLX4-201ENST00000294008 MGAM2Q2M2H8 2515 aa7.37□□□□□ -1.23
SLX4-201ENST00000294008 EPG5Q9HCE0 2579 aa7.36□□□□□ -1.23
SLX4-201ENST00000294008 Q6ZR54 194 aa7.35□□□□□ -1.23
SLX4-201ENST00000294008 A0A0C4DFX4 3053 aa7.35□□□□□ -1.23
SLX4-201ENST00000294008 LAMA2P24043 3122 aaKnown RBP7.34□□□□□ -1.23
SLX4-201ENST00000294008 KRTAP1-1Q07627 177 aa7.34□□□□□ -1.23
SLX4-201ENST00000294008 PANO1I0J062 215 aa7.33□□□□□ -1.24
SLX4-201ENST00000294008 CFAP54Q96N23 3096 aa7.33□□□□□ -1.24
SLX4-201ENST00000294008 BRCA2P51587 3418 aa7.33□□□□□ -1.24
SLX4-201ENST00000294008 A8MU10 97 aa7.31□□□□□ -1.24
SLX4-201ENST00000294008 P0C880 135 aa7.3□□□□□ -1.24
SLX4-201ENST00000294008 CHD7Q9P2D1 2997 aa7.28□□□□□ -1.24
SLX4-201ENST00000294008 LINC00472Q9H8W2 130 aa7.28□□□□□ -1.24
SLX4-201ENST00000294008 KRTAP26-1Q6PEX3 210 aa7.27□□□□□ -1.25
SLX4-201ENST00000294008 XIRP2A4UGR9 3374 aa7.27□□□□□ -1.25
SLX4-201ENST00000294008 KRTAP1-5Q9BYS1 174 aa7.27□□□□□ -1.25
SLX4-201ENST00000294008 TNP1P09430 55 aa7.26□□□□□ -1.25
SLX4-201ENST00000294008 A0A1B0GVY2 172 aa7.26□□□□□ -1.25
SLX4-201ENST00000294008 KRTAP10-8P60410 259 aa7.26□□□□□ -1.25
SLX4-201ENST00000294008 LAMA3Q16787 3333 aa7.25□□□□□ -1.25
SLX4-201ENST00000294008 NDUFAF8A1L188 74 aa7.24□□□□□ -1.25
SLX4-201ENST00000294008 A0A087X002 238 aa7.22□□□□□ -1.25
SLX4-201ENST00000294008 RANBP2P49792 3224 aaKnown RBP7.18□□□□□ -1.26
SLX4-201ENST00000294008 HTTP42858 3142 aa7.18□□□□□ -1.26
SLX4-201ENST00000294008 Q5XG85 94 aa7.17□□□□□ -1.26
SLX4-201ENST00000294008 PRUNE2Q8WUY3 3088 aa7.17□□□□□ -1.26
SLX4-201ENST00000294008 CYSTM1Q9H1C7 97 aa7.16□□□□□ -1.26
SLX4-201ENST00000294008 CELSR3Q9NYQ7 3312 aa7.16□□□□□ -1.26
SLX4-201ENST00000294008 SPRR1AP35321 89 aa7.14□□□□□ -1.27
SLX4-201ENST00000294008 ATRQ13535 2644 aa7.13□□□□□ -1.27
SLX4-201ENST00000294008 DNAH14Q0VDD8 3507 aa7.13□□□□□ -1.27
SLX4-201ENST00000294008 TRIOO75962 3097 aa7.13□□□□□ -1.27
SLX4-201ENST00000294008 DMBT1Q9UGM3 2413 aaPredicted RBP7.12□□□□□ -1.27
SLX4-201ENST00000294008 UNC80Q8N2C7 3258 aa7.12□□□□□ -1.27
SLX4-201ENST00000294008 HECTD1Q9ULT8 2610 aa7.11□□□□□ -1.27
SLX4-201ENST00000294008 KRTAP25-1Q3LHN0 102 aa7.11□□□□□ -1.27
SLX4-201ENST00000294008 CDH23Q9H251 3354 aa7.1□□□□□ -1.27
SLX4-201ENST00000294008 NOTCH2NLQ7Z3S9 236 aa7.08□□□□□ -1.28
SLX4-201ENST00000294008 FLNBO75369 2602 aaKnown RBP7.05□□□□□ -1.28
SLX4-201ENST00000294008 MAST4O15021 2626 aa7.03□□□□□ -1.28
SLX4-201ENST00000294008 FREM2Q5SZK8 3169 aa7.01□□□□□ -1.29
SLX4-201ENST00000294008 CFAP46Q8IYW2 2715 aa7.01□□□□□ -1.29
SLX4-201ENST00000294008 VPS13AQ96RL7 3174 aa7.01□□□□□ -1.29
SLX4-201ENST00000294008 KRTAP10-10P60014 251 aa6.99□□□□□ -1.29
SLX4-201ENST00000294008 STAB1Q9NY15 2570 aa6.99□□□□□ -1.29
SLX4-201ENST00000294008 WDFY4Q6ZS81 3184 aa6.98□□□□□ -1.29
SLX4-201ENST00000294008 CHD9Q3L8U1 2897 aa6.98□□□□□ -1.29
SLX4-201ENST00000294008 MGAQ8IWI9 3026 aa6.97□□□□□ -1.29
SLX4-201ENST00000294008 STAB2Q8WWQ8 2551 aa6.95□□□□□ -1.3
SLX4-201ENST00000294008 SZT2Q5T011 3432 aa6.95□□□□□ -1.3
SLX4-201ENST00000294008 ITPR3Q14573 2671 aa6.91□□□□□ -1.3
SLX4-201ENST00000294008 LAMA1P25391 3075 aa6.9□□□□□ -1.31
SLX4-201ENST00000294008 VCANP13611 3396 aa6.9□□□□□ -1.31
SLX4-201ENST00000294008 TRANK1O15050 2925 aa6.88□□□□□ -1.31
SLX4-201ENST00000294008 FLNAP21333 2647 aaKnown RBP6.88□□□□□ -1.31
SLX4-201ENST00000294008 PRO2289Q9P1D8 64 aa6.87□□□□□ -1.31
SLX4-201ENST00000294008 AKAP13Q12802 2813 aa6.86□□□□□ -1.31
SLX4-201ENST00000294008 NBEAL1Q6ZS30 2694 aa6.85□□□□□ -1.31
SLX4-201ENST00000294008 ASB16-AS1Q495Z4 193 aa6.84□□□□□ -1.31
SLX4-201ENST00000294008 FRYQ5TBA9 3013 aa6.84□□□□□ -1.31
SLX4-201ENST00000294008 REV3LO60673 3130 aa6.84□□□□□ -1.31
SLX4-201ENST00000294008 KRTAP11-1Q8IUC1 163 aa6.83□□□□□ -1.32
SLX4-201ENST00000294008 CENPEQ02224 2701 aa6.83□□□□□ -1.32
SLX4-201ENST00000294008 KRTAP4-16G5E9R7 235 aaPredicted RBP6.82□□□□□ -1.32
SLX4-201ENST00000294008 COL6A3P12111 3177 aa6.81□□□□□ -1.32
SLX4-201ENST00000294008 KRTAP13-2Q52LG2 175 aa6.8□□□□□ -1.32
SLX4-201ENST00000294008 KRTAP29-1A8MX34 341 aaPredicted RBP6.8□□□□□ -1.32
SLX4-201ENST00000294008 HELZ2Q9BYK8 2649 aaKnown RBP6.79□□□□□ -1.32
SLX4-201ENST00000294008 CHD6Q8TD26 2715 aa6.79□□□□□ -1.32
SLX4-201ENST00000294008 RPS29P62273 56 aaKnown RBP6.78□□□□□ -1.32
SLX4-201ENST00000294008 Q6ZRN7 208 aaPredicted RBP6.75□□□□□ -1.33
SLX4-201ENST00000294008 DSPP15924 2871 aaKnown RBP6.74□□□□□ -1.33
SLX4-201ENST00000294008 MAP1AP78559 2803 aaPredicted RBP6.74□□□□□ -1.33
SLX4-201ENST00000294008 A6NN06 94 aa6.73□□□□□ -1.33
SLX4-201ENST00000294008 SPEGQ15772 3267 aa6.73□□□□□ -1.33
SLX4-201ENST00000294008 PP632Q6XCG6 107 aa6.72□□□□□ -1.33
SLX4-201ENST00000294008 KALRNO60229 2985 aa6.71□□□□□ -1.33
SLX4-201ENST00000294008 FRYLO94915 3013 aa6.69□□□□□ -1.34
SLX4-201ENST00000294008 BAHCC1Q9P281 2608 aa6.66□□□□□ -1.34
SLX4-201ENST00000294008 EYSQ5T1H1 3165 aa6.66□□□□□ -1.34
SLX4-201ENST00000294008 TEX15Q9BXT5 2789 aa6.65□□□□□ -1.35
SLX4-201ENST00000294008 SETXQ7Z333 2677 aaKnown RBP6.65□□□□□ -1.35
SLX4-201ENST00000294008 BOD1L1Q8NFC6 3051 aa6.64□□□□□ -1.35
SLX4-201ENST00000294008 CFAP47Q6ZTR5 3102 aa6.64□□□□□ -1.35
SLX4-201ENST00000294008 TEP1Q99973 2627 aaKnown RBP6.64□□□□□ -1.35
SLX4-201ENST00000294008 SPTBN5Q9NRC6 3674 aaKnown RBP6.64□□□□□ -1.35
SLX4-201ENST00000294008 XP32Q5T750 250 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms