RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Gm9767G3X930 207 aa16.15■□□□□ 0.18
Ccdc88a-202ENSMUST00000109477 MsmbO08540 113 aa16.15■□□□□ 0.18
Ccdc88a-202ENSMUST00000109477 Smrp1Q2MH31 260 aa16.15■□□□□ 0.18
Ccdc88a-202ENSMUST00000109477 Ypel4Q65Z93 127 aa16.15■□□□□ 0.18
Ccdc88a-202ENSMUST00000109477 Glrx2Q923X4 156 aa16.15■□□□□ 0.18
Ccdc88a-202ENSMUST00000109477 Olfr218E9PWV2 313 aa16.14■□□□□ 0.17
Ccdc88a-202ENSMUST00000109477 Olfr715bE9Q725 315 aa16.14■□□□□ 0.17
Ccdc88a-202ENSMUST00000109477 Gm6970F7DCP6 221 aa16.14■□□□□ 0.17
Ccdc88a-202ENSMUST00000109477 Foxh1O88621 401 aa16.14■□□□□ 0.17
Ccdc88a-202ENSMUST00000109477 CampP51437 172 aa16.14■□□□□ 0.17
Ccdc88a-202ENSMUST00000109477 Olfr1373Q7TQT6 311 aa16.14■□□□□ 0.17
Ccdc88a-202ENSMUST00000109477 Olfr715Q8VG49 315 aa16.14■□□□□ 0.17
Ccdc88a-202ENSMUST00000109477 Ufc1Q9CR09 167 aa16.14■□□□□ 0.17
Ccdc88a-202ENSMUST00000109477 Fam241aQ9CZL2 131 aa16.14■□□□□ 0.17
Ccdc88a-202ENSMUST00000109477 Lyg1Q9D7Q0 197 aa16.14■□□□□ 0.17
Ccdc88a-202ENSMUST00000109477 Ighv1-53A0A075B5W3 117 aa16.14■□□□□ 0.17
Ccdc88a-202ENSMUST00000109477 Ighv1-80A0A075B5Y3 117 aa16.14■□□□□ 0.17
Ccdc88a-202ENSMUST00000109477 Adam8Q05910 826 aa16.14■□□□□ 0.17
Ccdc88a-202ENSMUST00000109477 Tppp2Q0P5Y3 170 aa16.14■□□□□ 0.17
Ccdc88a-202ENSMUST00000109477 RprmlQ3URD2 117 aa16.14■□□□□ 0.17
Ccdc88a-202ENSMUST00000109477 A930004D18RikQ8C8W7 157 aa16.14■□□□□ 0.17
Ccdc88a-202ENSMUST00000109477 Saa4P31532 130 aa16.13■□□□□ 0.17
Ccdc88a-202ENSMUST00000109477 AW146154Q3TPQ7 468 aa16.13■□□□□ 0.17
Ccdc88a-202ENSMUST00000109477 Znf48Q3US17 591 aa16.13■□□□□ 0.17
Ccdc88a-202ENSMUST00000109477 Olfr702Q920Z2 318 aa16.13■□□□□ 0.17
Ccdc88a-202ENSMUST00000109477 Dpm3Q9D1Q4 92 aa16.13■□□□□ 0.17
Ccdc88a-202ENSMUST00000109477 Scgb1b12A0A087WP21 93 aa16.12■□□□□ 0.17
Ccdc88a-202ENSMUST00000109477 Gm933J3QPC1 141 aa16.12■□□□□ 0.17
Ccdc88a-202ENSMUST00000109477 Rnase1P00683 149 aa16.12■□□□□ 0.17
Ccdc88a-202ENSMUST00000109477 Ifna11Q61716 190 aa16.12■□□□□ 0.17
Ccdc88a-202ENSMUST00000109477 Cd99Q8VCN6 175 aa16.12■□□□□ 0.17
Ccdc88a-202ENSMUST00000109477 Spcs1Q9D958 161 aa16.12■□□□□ 0.17
Ccdc88a-202ENSMUST00000109477 Ighv1-52A0A0A6YXC3 117 aa16.11■□□□□ 0.17
Ccdc88a-202ENSMUST00000109477 Sox15P43267 231 aa16.11■□□□□ 0.17
Ccdc88a-202ENSMUST00000109477 Slc35d2Q762D5 326 aa16.11■□□□□ 0.17
Ccdc88a-202ENSMUST00000109477 Rnf24Q8BGI1 148 aa16.11■□□□□ 0.17
Ccdc88a-202ENSMUST00000109477 Vamp5Q9Z2P8 102 aa16.11■□□□□ 0.17
Ccdc88a-202ENSMUST00000109477 Obox8V9GWY9 217 aa16.11■□□□□ 0.17
Ccdc88a-202ENSMUST00000109477 Igkv4-57-1A0A075B5M4 119 aa16.11■□□□□ 0.17
Ccdc88a-202ENSMUST00000109477 Gm5878E9PUB3 99 aa16.11■□□□□ 0.17
Ccdc88a-202ENSMUST00000109477 Olfr745Q7TRL9 328 aa16.11■□□□□ 0.17
Ccdc88a-202ENSMUST00000109477 Bpifb3Q80ZU7 473 aa16.11■□□□□ 0.17
Ccdc88a-202ENSMUST00000109477 UrahQ9CRB3 118 aa16.11■□□□□ 0.17
Ccdc88a-202ENSMUST00000109477 Sorl1O88307 2215 aaKnown RBP16.1■□□□□ 0.17
Ccdc88a-202ENSMUST00000109477 Gm10553J3QPF1 123 aa16.1■□□□□ 0.17
Ccdc88a-202ENSMUST00000109477 Ang6Q5GAN0 147 aa16.1■□□□□ 0.17
Ccdc88a-202ENSMUST00000109477 Fam222aQ6PGH4 453 aa16.1■□□□□ 0.17
Ccdc88a-202ENSMUST00000109477 Odf3l1Q810P2 275 aa16.1■□□□□ 0.17
Ccdc88a-202ENSMUST00000109477 Oraov1Q8CH62 137 aa16.1■□□□□ 0.17
Ccdc88a-202ENSMUST00000109477 Mcrip2Q9CQB2 160 aaKnown RBP16.1■□□□□ 0.17
Ccdc88a-202ENSMUST00000109477 Olfr1118A0A0J9YUE7 307 aa16.09■□□□□ 0.17
Ccdc88a-202ENSMUST00000109477 Tmem141A2AJB2 108 aa16.09■□□□□ 0.17
Ccdc88a-202ENSMUST00000109477 Gm21983D6RFS9 131 aa16.09■□□□□ 0.17
Ccdc88a-202ENSMUST00000109477 Ascl2O35885 263 aa16.09■□□□□ 0.17
Ccdc88a-202ENSMUST00000109477 OstcQ78XF5 149 aa16.09■□□□□ 0.17
Ccdc88a-202ENSMUST00000109477 Prelid1Q8R107 217 aa16.09■□□□□ 0.17
Ccdc88a-202ENSMUST00000109477 Mgst1Q91VS7 155 aa16.09■□□□□ 0.17
Ccdc88a-202ENSMUST00000109477 3110018I06RikQ9CXS0 120 aa16.09■□□□□ 0.17
Ccdc88a-202ENSMUST00000109477 Ighv14-1A0A075B5R4 117 aa16.08■□□□□ 0.17
Ccdc88a-202ENSMUST00000109477 Gm10203F6QJ09 66 aa16.08■□□□□ 0.17
Ccdc88a-202ENSMUST00000109477 LfngO09010 378 aa16.08■□□□□ 0.17
Ccdc88a-202ENSMUST00000109477 Gm5941Q497P9 117 aa16.08■□□□□ 0.17
Ccdc88a-202ENSMUST00000109477 Trpt1Q8K3A2 249 aa16.08■□□□□ 0.17
Ccdc88a-202ENSMUST00000109477 Rnf183Q8QZS5 190 aa16.08■□□□□ 0.17
Ccdc88a-202ENSMUST00000109477 Stxbp6Q8R3T5 210 aa16.08■□□□□ 0.17
Ccdc88a-202ENSMUST00000109477 Olfr1402Q8VET1 320 aa16.08■□□□□ 0.17
Ccdc88a-202ENSMUST00000109477 Rab5aQ9CQD1 215 aa16.08■□□□□ 0.17
Ccdc88a-202ENSMUST00000109477 Ighv12-3A0A075B5T1 117 aa16.08■□□□□ 0.16
Ccdc88a-202ENSMUST00000109477 Tcrg-V6A0A075B5Y8 134 aa16.08■□□□□ 0.16
Ccdc88a-202ENSMUST00000109477 Trav16A0A075B653 116 aa16.08■□□□□ 0.16
Ccdc88a-202ENSMUST00000109477 Gp9O88186 177 aa16.08■□□□□ 0.16
Ccdc88a-202ENSMUST00000109477 C1ql4Q4ZJM9 238 aa16.08■□□□□ 0.16
Ccdc88a-202ENSMUST00000109477 Kcnip4Q6PHZ8 250 aa16.08■□□□□ 0.16
Ccdc88a-202ENSMUST00000109477 Tnfrsf13cQ9D8D0 175 aa16.08■□□□□ 0.16
Ccdc88a-202ENSMUST00000109477 Notch2O35516 2470 aa16.07■□□□□ 0.16
Ccdc88a-202ENSMUST00000109477 Olfr1245A0A1L1SQJ6 307 aa16.07■□□□□ 0.16
Ccdc88a-202ENSMUST00000109477 Foxc2Q61850 494 aa16.07■□□□□ 0.16
Ccdc88a-202ENSMUST00000109477 6030452D12RikQ8CD33 222 aa16.07■□□□□ 0.16
Ccdc88a-202ENSMUST00000109477 Vmn1r70Q8R254 298 aa16.07■□□□□ 0.16
Ccdc88a-202ENSMUST00000109477 Rpl11Q9CXW4 178 aaKnown RBP16.07■□□□□ 0.16
Ccdc88a-202ENSMUST00000109477 Gm9964E9Q9S5 144 aa16.06■□□□□ 0.16
Ccdc88a-202ENSMUST00000109477 Olfr1185-ps1F6XP16 303 aa16.06■□□□□ 0.16
Ccdc88a-202ENSMUST00000109477 Gm16686Q3UMN9 131 aa16.06■□□□□ 0.16
Ccdc88a-202ENSMUST00000109477 Mapk1ip1lQ8BH93 242 aa16.06■□□□□ 0.16
Ccdc88a-202ENSMUST00000109477 Chchd5Q9CQP3 110 aa16.06■□□□□ 0.16
Ccdc88a-202ENSMUST00000109477 Gm10447Q3UQ92 135 aa16.05■□□□□ 0.16
Ccdc88a-202ENSMUST00000109477 Duxbl2Q7TNE6 350 aa16.05■□□□□ 0.16
Ccdc88a-202ENSMUST00000109477 Nrn1Q8CFV4 142 aa16.05■□□□□ 0.16
Ccdc88a-202ENSMUST00000109477 Defb10Q8R2I8 73 aa16.05■□□□□ 0.16
Ccdc88a-202ENSMUST00000109477 Ucn2Q99ML8 113 aa16.05■□□□□ 0.16
Ccdc88a-202ENSMUST00000109477 Tcrg-C2A0A075B5Z2 167 aa16.05■□□□□ 0.16
Ccdc88a-202ENSMUST00000109477 P01853 167 aa16.05■□□□□ 0.16
Ccdc88a-202ENSMUST00000109477 Q4KKZ1 196 aa16.05■□□□□ 0.16
Ccdc88a-202ENSMUST00000109477 Zfp248Q640N4 576 aa16.05■□□□□ 0.16
Ccdc88a-202ENSMUST00000109477 Gm10118Q8C8J5 116 aa16.05■□□□□ 0.16
Ccdc88a-202ENSMUST00000109477 Tctex1d4Q8CDY7 219 aa16.05■□□□□ 0.16
Ccdc88a-202ENSMUST00000109477 AhspQ9CY02 102 aa16.05■□□□□ 0.16
Ccdc88a-202ENSMUST00000109477 PolqQ8CGS6 2544 aa16.04■□□□□ 0.16
Ccdc88a-202ENSMUST00000109477 Zfp979A2A799 407 aa16.04■□□□□ 0.16
Ccdc88a-202ENSMUST00000109477 Tnfsf15Q5UBV8 252 aa16.04■□□□□ 0.16
Retrieved 100 of 22,080 RNA–protein pairs in 34.4 ms