RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Defa9P50707 93 aa9.15□□□□□ -0.94
Col9a1-202ENSMUST00000088349 Dnajc30P59041 219 aa9.15□□□□□ -0.94
Col9a1-202ENSMUST00000088349 Plxdc1Q91ZV7 500 aa9.15□□□□□ -0.94
Col9a1-202ENSMUST00000088349 Lypd8Q9D7S0 255 aa9.15□□□□□ -0.94
Col9a1-202ENSMUST00000088349 Tmem160Q9D938 188 aa9.15□□□□□ -0.94
Col9a1-202ENSMUST00000088349 Ighv9-4A0A0A6YWH6 117 aa9.15□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Olfr1337A2ACY8 315 aa9.15□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Gm6871L7N248 545 aa9.15□□□□□ -0.95
Col9a1-202ENSMUST00000088349 TfpiO54819 306 aa9.15□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Sox21Q811W0 276 aa9.15□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Olfr1367Q8VFG2 316 aa9.15□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Crybb3Q9JJU9 211 aa9.15□□□□□ -0.95
Col9a1-202ENSMUST00000088349 C1qtnf4Q8R066 326 aa9.14□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Slc17a9Q8VCL5 447 aa9.14□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Trav6n-6A0A075B6B2 114 aa9.14□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Lynx1P0DP60 116 aa9.14□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Dlx6P70397 175 aa9.14□□□□□ -0.95
Col9a1-202ENSMUST00000088349 B430305J03RikQ8BQQ8 176 aa9.14□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Olfr1330Q8VEY6 315 aa9.14□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Tm4sf20Q9CQY8 226 aa9.14□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Ighv6-7A0A0A6YWU3 119 aa9.13□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Tmem88bQ3TYP4 173 aa9.13□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Spsb3Q571F5 354 aa9.13□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Ptpn13Q64512 2453 aa9.13□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Ncor2Q9WU42 2472 aaKnown RBP9.13□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Gm28778A0A087WSK7 233 aa9.13□□□□□ -0.95
Col9a1-202ENSMUST00000088349 A0A1Y7VMQ4 148 aa9.13□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Higd1cQ76I25 96 aa9.13□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Gm26566Q8CAC1 153 aa9.13□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Ormdl3Q9CPZ6 153 aa9.13□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Abca12E9Q876 2595 aa9.13□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Trdv2-1A0A0G2JGB9 116 aa9.13□□□□□ -0.95
Col9a1-202ENSMUST00000088349 B1ARW8 110 aa9.13□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Gm26727M0QWT1 121 aa9.13□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Cacng7P62956 275 aa9.13□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Trdv2-2Q5R1A4 116 aa9.13□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Gm9958Q8C9U4 106 aa9.13□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Abca2P41234 2434 aa9.13□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Gm5157A0A087WRH8 301 aa9.12□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Trbv14A0A140T8L9 115 aa9.12□□□□□ -0.95
Col9a1-202ENSMUST00000088349 BC107364E9Q5A2 140 aa9.12□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Ccl6P27784 116 aa9.12□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Olfr1437Q7TQR7 312 aa9.12□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Ndufb3Q9CQZ6 104 aa9.12□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Timm23Q9WTQ8 209 aa9.12□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Lce6aD3YV94 81 aa9.12□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Defa13P50711 93 aa9.12□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Olfr745Q7TRL9 328 aa9.12□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Klk15Q8CGR4 254 aa9.12□□□□□ -0.95
Col9a1-202ENSMUST00000088349 OtosQ8R448 89 aa9.12□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Ifitm2Q99J93 144 aa9.12□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Errfi1Q99JZ7 461 aa9.12□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Malsu1Q9CWV0 228 aa9.12□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Tomm40Q9QYA2 361 aa9.12□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Ube2l6Q9QZU9 153 aa9.12□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Trav6d-7A0A075B6B0 112 aa9.11□□□□□ -0.95
Col9a1-202ENSMUST00000088349 P0C1Z5 52 aa9.11□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Gm1968Q3T9I3 115 aa9.11□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Olfr1243Q8VGM7 305 aa9.11□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Ighv1-69A0A0G2JFS5 117 aa9.11□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Esp38A8R0X1 80 aa9.11□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Gm17660B9UIU9 90 aa9.11□□□□□ -0.95
Col9a1-202ENSMUST00000088349 BokO35425 213 aa9.11□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Gm15294V9GXA7 121 aa9.11□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Tmem29A2ANF5 204 aa9.11□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Cdkn1aP39689 159 aa9.11□□□□□ -0.95
Col9a1-202ENSMUST00000088349 F2rl1P55086 399 aa9.11□□□□□ -0.95
Col9a1-202ENSMUST00000088349 RhogP84096 191 aa9.11□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Adam8Q05910 826 aa9.11□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Ubald2Q8BQH4 164 aa9.11□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Olfr1199Q8VF94 310 aa9.11□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Ovol1Q9WTJ2 267 aa9.11□□□□□ -0.95
Col9a1-202ENSMUST00000088349 GaptQ8CB93 157 aa9.1□□□□□ -0.95
Col9a1-202ENSMUST00000088349 NpbQ8K4P1 119 aa9.1□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Bex1Q9R224 128 aa9.1□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Osr1Q9WVG7 266 aa9.1□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Gm15217A2CG07 155 aa9.1□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Sertad4A7DTG3 377 aa9.1□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Gm15293D3YX02 93 aa9.1□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Plp1P60202 277 aa9.1□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Prok1Q14A28 105 aa9.1□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Ttc9cQ810A3 171 aa9.1□□□□□ -0.95
Col9a1-202ENSMUST00000088349 CompQ9R0G6 755 aa9.1□□□□□ -0.95
Col9a1-202ENSMUST00000088349 IcosQ9WVS0 200 aa9.1□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Nxph4G3X9N5 304 aa9.09□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Rnf5O35445 180 aa9.09□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Defa-rs7P50715 91 aa9.09□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Ubr5Q80TP3 2792 aa9.09□□□□□ -0.95
Col9a1-202ENSMUST00000088349 9230109A22RikQ8BHE6 111 aa9.09□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Gm10190Q8BSD7 107 aa9.09□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Tmem129Q8K304 362 aa9.09□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Insig2Q91WG1 225 aa9.09□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Q9DAZ5 108 aa9.09□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Rnf114Q9ET26 229 aa9.09□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Cml3Q9JIY8 226 aa9.09□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Mfge8P21956 463 aaKnown RBP9.09□□□□□ -0.95
Col9a1-202ENSMUST00000088349 4930412O13RikQ9D5M9 106 aa9.09□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Sorl1O88307 2215 aaKnown RBP9.09□□□□□ -0.95
Col9a1-202ENSMUST00000088349 Ighv8-4A0A0A6YW26 117 aa9.08□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Gm17359A0A0G2JEB7 487 aa9.08□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 85.6 ms