RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Wnt2P21552 360 aa11.34□□□□□ -0.59
Col3a1-201ENSMUST00000087883 Klf14Q19A41 325 aa11.34□□□□□ -0.59
Col3a1-201ENSMUST00000087883 StrcQ8VIM6 1809 aa11.34□□□□□ -0.59
Col3a1-201ENSMUST00000087883 Baz2aQ91YE5 1889 aaKnown RBP11.34□□□□□ -0.59
Col3a1-201ENSMUST00000087883 PkigO70139 76 aa11.33□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Defb30Q30KN4 75 aa11.33□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Morn3Q8C5T4 241 aa11.33□□□□□ -0.6
Col3a1-201ENSMUST00000087883 TdhQ8K3F7 373 aa11.33□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Cabin1G3X8Q1 2187 aaKnown RBP11.33□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Gm16381A0A1Y7VKT9 73 aa11.33□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Igkv1-99F6XWB2 120 aa11.33□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Loxhd1C8YR32 2068 aa11.33□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Gm7489Q3UT34 171 aa11.33□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Gm6040Q4QY32 63 aa11.33□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Ighv8-2A0A0A6YW58 119 aa11.33□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Mrpl55Q9CZ83 127 aa11.33□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Scn10aQ6QIY3 1958 aa11.33□□□□□ -0.6
Col3a1-201ENSMUST00000087883 9130213A22RikQ3V3T2 120 aa11.33□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Ndufa3Q9CQ91 84 aa11.33□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Igkv6-23A0A140T8N5 115 aa11.32□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Ang6Q5GAN0 147 aa11.32□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Gm4763Q8CFJ5 196 aa11.32□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Nup214Q80U93 2085 aa11.32□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Gm20517G3UVU6 152 aa11.32□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Ifi27l2aQ8R412 90 aa11.32□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Pgpep1lQ9CWB5 130 aa11.32□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Lyzl4Q9D925 145 aa11.32□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Supt4h1bQ9Z199 117 aa11.32□□□□□ -0.6
Col3a1-201ENSMUST00000087883 P01660 111 aa11.32□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Trav2Q5R1I9 109 aa11.32□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Zfp236S4R299 1847 aa11.32□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Myo16Q5DU14 1919 aa11.32□□□□□ -0.6
Col3a1-201ENSMUST00000087883 A0A286YE02 88 aa11.32□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Tcl1b2P56841 117 aa11.32□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Znf740Q6NZQ6 180 aa11.32□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Ighv1-31A0A0A6YWK5 117 aa11.31□□□□□ -0.6
Col3a1-201ENSMUST00000087883 RtbdnQ8QZY4 247 aa11.31□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Dock8Q8C147 2100 aa11.31□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Foxs1Q61574 329 aa11.31□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Fer1l5P0DM40 2038 aa11.31□□□□□ -0.6
Col3a1-201ENSMUST00000087883 P01726 129 aa11.31□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Ndufc2Q9CQ54 120 aa11.31□□□□□ -0.6
Col3a1-201ENSMUST00000087883 PpbpQ9EQI5 113 aa11.31□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Ighv1-62-3P01754 117 aa11.31□□□□□ -0.6
Col3a1-201ENSMUST00000087883 5730522E02RikQ5SP45 163 aa11.31□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Cmc4Q61908 68 aa11.31□□□□□ -0.6
Col3a1-201ENSMUST00000087883 VsirQ9D659 308 aa11.31□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Itgb4A2A863 1818 aa11.31□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Dicer1Q8R418 1916 aa11.3□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Myod1P10085 318 aa11.3□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Svs5P30933 122 aa11.3□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Il19Q8CJ70 176 aa11.3□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Shisa9Q9CZN4 424 aa11.3□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Fam216aQ9DB54 251 aa11.3□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Igkv19-93A0A0G2JFZ3 115 aa11.3□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Eid2bE9Q2Y0 151 aa11.3□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Sap30O88574 220 aa11.3□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Wt1P22561 449 aa11.3□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Znrd1Q791N7 123 aa11.3□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Ighv1-80A0A075B5Y3 117 aa11.3□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Shisal2aA2A9G7 189 aa11.3□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Znf260Q62513 407 aa11.3□□□□□ -0.6
Col3a1-201ENSMUST00000087883 EpopQ7TNS8 369 aa11.3□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Spata46Q4FZF2 204 aa11.3□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Igkv20-101-2A0A0G2JDU3 113 aa11.3□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Igkv8-24A0A140T8P5 121 aa11.3□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Gm12169F2Z474 250 aa11.3□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Gm10384Q3UQ87 92 aa11.3□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Samd5Q3V1H9 173 aa11.3□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Atp6v0bQ91V37 205 aa11.3□□□□□ -0.6
Col3a1-201ENSMUST00000087883 PmvkQ9D1G2 192 aa11.3□□□□□ -0.6
Col3a1-201ENSMUST00000087883 P03980 138 aa11.29□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Wipf2Q6PEV3 440 aa11.29□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Tcf24V9GWT9 166 aa11.29□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Dock1Q8BUR4 1865 aa11.29□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Gm20379A0A087WR34 119 aa11.29□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Igkv4-68A0A0B4J1I7 117 aa11.29□□□□□ -0.6
Col3a1-201ENSMUST00000087883 KprpB2RUR4 657 aa11.29□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Tmem200bD3Z0P8 284 aa11.29□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Pde6hP61249 83 aa11.29□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Cxcl14Q9WUQ5 99 aa11.29□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Ighv1-9A0A0A6YW37 117 aa11.29□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Gm9513B3GLJ6 99 aa11.29□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Ypel3P61237 119 aa11.29□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Cox11Q6P8I6 275 aa11.29□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Rnf183Q8QZS5 190 aa11.29□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Trav6d-7A0A075B6B0 112 aa11.29□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Foxl2O88470 375 aa11.29□□□□□ -0.6
Col3a1-201ENSMUST00000087883 CrygbP04344 175 aa11.29□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Tctex1d4Q8CDY7 219 aa11.29□□□□□ -0.6
Col3a1-201ENSMUST00000087883 HampQ9EQ21 83 aa11.29□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Ralgapa2A3KGS3 1872 aa11.28□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Ighv1-69A0A0G2JFS5 117 aa11.28□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Gm10604Q3V0X7 143 aa11.28□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Rpl35aO55142 110 aa11.28□□□□□ -0.6
Col3a1-201ENSMUST00000087883 P01792 123 aa11.28□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Abca7Q91V24 2159 aa11.28□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Id3P41133 119 aa11.28□□□□□ -0.6
Col3a1-201ENSMUST00000087883 C730034F03RikQ8BGL5 111 aa11.28□□□□□ -0.6
Col3a1-201ENSMUST00000087883 Ube2e2Q91W82 201 aa11.28□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 70.5 ms