RNA–Protein interactions for RNA: ENSMUST00000026740.5

Col7a1-201, Transcript of Collagen alpha-1(VII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col7a1, Length 9,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1-201ENSMUST00000026740 Gm15114B1B0X6 433 aa11.92□□□□□ -0.5
Col7a1-201ENSMUST00000026740 Q9D8L0 127 aa11.92□□□□□ -0.5
Col7a1-201ENSMUST00000026740 Slc17a9Q8VCL5 447 aa11.92□□□□□ -0.5
Col7a1-201ENSMUST00000026740 Supt4h1aP63271 117 aa11.92□□□□□ -0.5
Col7a1-201ENSMUST00000026740 MgamB5THE2 1827 aa11.92□□□□□ -0.5
Col7a1-201ENSMUST00000026740 PtprbB2RU80 1998 aa11.92□□□□□ -0.5
Col7a1-201ENSMUST00000026740 Bcl6bO88282 474 aa11.92□□□□□ -0.5
Col7a1-201ENSMUST00000026740 Gm19345G3UYD9 124 aa11.92□□□□□ -0.5
Col7a1-201ENSMUST00000026740 Rchy1Q9CR50 261 aa11.92□□□□□ -0.5
Col7a1-201ENSMUST00000026740 Trav14d-3-dv8A0A075B619 120 aa11.91□□□□□ -0.5
Col7a1-201ENSMUST00000026740 Saa4P31532 130 aa11.91□□□□□ -0.5
Col7a1-201ENSMUST00000026740 Notch4P31695 1964 aa11.91□□□□□ -0.5
Col7a1-201ENSMUST00000026740 Ndufs7Q9DC70 224 aa11.91□□□□□ -0.5
Col7a1-201ENSMUST00000026740 Cd5lQ9QWK4 352 aa11.91□□□□□ -0.5
Col7a1-201ENSMUST00000026740 Tmem219Q9D123 240 aa11.91□□□□□ -0.5
Col7a1-201ENSMUST00000026740 Fgf16Q9ESL8 207 aa11.91□□□□□ -0.5
Col7a1-201ENSMUST00000026740 TectaO08523 2155 aa11.91□□□□□ -0.5
Col7a1-201ENSMUST00000026740 Dkk1O54908 272 aa11.91□□□□□ -0.5
Col7a1-201ENSMUST00000026740 Ube2cQ9D1C1 179 aa11.91□□□□□ -0.5
Col7a1-201ENSMUST00000026740 Sap30O88574 220 aa11.91□□□□□ -0.5
Col7a1-201ENSMUST00000026740 Ndufa7Q9Z1P6 113 aaKnown RBP11.91□□□□□ -0.5
Col7a1-201ENSMUST00000026740 Gm4894Q8CA09 118 aa11.91□□□□□ -0.5
Col7a1-201ENSMUST00000026740 C1ql2Q8CFR0 287 aa11.91□□□□□ -0.5
Col7a1-201ENSMUST00000026740 Igkv14-111A0A140T8P9 117 aa11.91□□□□□ -0.5
Col7a1-201ENSMUST00000026740 Col9a3A2ACT7 680 aa11.91□□□□□ -0.5
Col7a1-201ENSMUST00000026740 Igkv4-86A0A0G2JGE7 114 aa11.9□□□□□ -0.5
Col7a1-201ENSMUST00000026740 Gm42517A0A1Y7VLQ2 374 aa11.9□□□□□ -0.5
Col7a1-201ENSMUST00000026740 Siglec15A7E1W8 342 aa11.9□□□□□ -0.5
Col7a1-201ENSMUST00000026740 Gm20517G3UVU6 152 aa11.9□□□□□ -0.5
Col7a1-201ENSMUST00000026740 Susd3Q9D176 269 aa11.9□□□□□ -0.5
Col7a1-201ENSMUST00000026740 Olfr745Q7TRL9 328 aa11.9□□□□□ -0.5
Col7a1-201ENSMUST00000026740 Q8R092 253 aa11.9□□□□□ -0.5
Col7a1-201ENSMUST00000026740 P18533 117 aa11.9□□□□□ -0.5
Col7a1-201ENSMUST00000026740 Gm2564F6Z9S8 108 aa11.9□□□□□ -0.5
Col7a1-201ENSMUST00000026740 Ccl19O70460 108 aa11.9□□□□□ -0.5
Col7a1-201ENSMUST00000026740 Ndufc2Q9CQ54 120 aa11.9□□□□□ -0.5
Col7a1-201ENSMUST00000026740 4930583I09RikQ9D2E3 102 aa11.9□□□□□ -0.5
Col7a1-201ENSMUST00000026740 Ighv5-6A0A075B5Q0 117 aa11.9□□□□□ -0.51
Col7a1-201ENSMUST00000026740 Repin1Q5U4E2 545 aa11.9□□□□□ -0.51
Col7a1-201ENSMUST00000026740 Gtf3aQ8VHT7 364 aa11.9□□□□□ -0.51
Col7a1-201ENSMUST00000026740 Zfp36l2P23949 484 aaKnown RBP11.89□□□□□ -0.51
Col7a1-201ENSMUST00000026740 Hs3st6Q5GFD5 342 aa11.89□□□□□ -0.51
Col7a1-201ENSMUST00000026740 Trbv12-1A0A0B4J1H0 124 aa11.89□□□□□ -0.51
Col7a1-201ENSMUST00000026740 Gm45213A0A0U1RNZ6 101 aa11.89□□□□□ -0.51
Col7a1-201ENSMUST00000026740 P01896 185 aa11.89□□□□□ -0.51
Col7a1-201ENSMUST00000026740 Gm11110Q3U4K9 109 aa11.89□□□□□ -0.51
Col7a1-201ENSMUST00000026740 Vmo1Q5SXG7 201 aa11.89□□□□□ -0.51
Col7a1-201ENSMUST00000026740 Trbv30A0A0B4J1P1 111 aa11.89□□□□□ -0.51
Col7a1-201ENSMUST00000026740 Igkv4-62A0A0G2JDW9 117 aa11.89□□□□□ -0.51
Col7a1-201ENSMUST00000026740 Fam53bQ8BGR5 422 aa11.89□□□□□ -0.51
Col7a1-201ENSMUST00000026740 Timm21Q8CCM6 249 aa11.89□□□□□ -0.51
Col7a1-201ENSMUST00000026740 Igkv4-57-1A0A075B5M4 119 aa11.89□□□□□ -0.51
Col7a1-201ENSMUST00000026740 Wdr83osQ6ZWX0 106 aa11.89□□□□□ -0.51
Col7a1-201ENSMUST00000026740 Pkd1l2Q7TN88 2461 aa11.89□□□□□ -0.51
Col7a1-201ENSMUST00000026740 Ighv1-7A0A075B5T7 117 aa11.88□□□□□ -0.51
Col7a1-201ENSMUST00000026740 Trav6-4A0A075B6B4 115 aa11.88□□□□□ -0.51
Col7a1-201ENSMUST00000026740 1700025B11RikA0A087WNZ6 93 aa11.88□□□□□ -0.51
Col7a1-201ENSMUST00000026740 Gm6871L7N248 545 aa11.88□□□□□ -0.51
Col7a1-201ENSMUST00000026740 Folr2Q05685 251 aa11.88□□□□□ -0.51
Col7a1-201ENSMUST00000026740 Defa21Q8C1P2 93 aa11.88□□□□□ -0.51
Col7a1-201ENSMUST00000026740 Igkv4-68A0A0B4J1I7 117 aa11.88□□□□□ -0.51
Col7a1-201ENSMUST00000026740 Trav7d-3Q5R1I1 112 aa11.88□□□□□ -0.51
Col7a1-201ENSMUST00000026740 PtprsB0V2N1 1907 aa11.88□□□□□ -0.51
Col7a1-201ENSMUST00000026740 P18532 116 aa11.88□□□□□ -0.51
Col7a1-201ENSMUST00000026740 BC067074F6RXI4 2391 aa11.88□□□□□ -0.51
Col7a1-201ENSMUST00000026740 PdpnQ62011 172 aa11.88□□□□□ -0.51
Col7a1-201ENSMUST00000026740 Timm23Q9WTQ8 209 aa11.88□□□□□ -0.51
Col7a1-201ENSMUST00000026740 SeboxP70368 190 aa11.88□□□□□ -0.51
Col7a1-201ENSMUST00000026740 Zfp362B1ASA5 418 aa11.87□□□□□ -0.51
Col7a1-201ENSMUST00000026740 Igkv9-124A0A0G2JDR3 117 aa11.87□□□□□ -0.51
Col7a1-201ENSMUST00000026740 Klrd1O54707 179 aa11.87□□□□□ -0.51
Col7a1-201ENSMUST00000026740 Q4KKZ1 196 aa11.87□□□□□ -0.51
Col7a1-201ENSMUST00000026740 Pear1Q8VIK5 1034 aa11.87□□□□□ -0.51
Col7a1-201ENSMUST00000026740 Lsm4Q9QXA5 137 aaKnown RBP11.87□□□□□ -0.51
Col7a1-201ENSMUST00000026740 Wbp2nlQ9D529 359 aa11.87□□□□□ -0.51
Col7a1-201ENSMUST00000026740 Tex36Q9D5N9 219 aa11.87□□□□□ -0.51
Col7a1-201ENSMUST00000026740 Znf474Q6V5K9 347 aa11.87□□□□□ -0.51
Col7a1-201ENSMUST00000026740 Lrrc25Q8K1T1 297 aa11.87□□□□□ -0.51
Col7a1-201ENSMUST00000026740 Jsrp1Q3MI48 332 aa11.86□□□□□ -0.51
Col7a1-201ENSMUST00000026740 Spink1P09036 80 aa11.86□□□□□ -0.51
Col7a1-201ENSMUST00000026740 Ccl3P10855 92 aa11.86□□□□□ -0.51
Col7a1-201ENSMUST00000026740 Otx1P80205 355 aa11.86□□□□□ -0.51
Col7a1-201ENSMUST00000026740 Mrpl53Q9D1H8 118 aaKnown RBP11.86□□□□□ -0.51
Col7a1-201ENSMUST00000026740 Ca1P13634 261 aa11.86□□□□□ -0.51
Col7a1-201ENSMUST00000026740 Zfp72Q0VFY0 435 aa11.86□□□□□ -0.51
Col7a1-201ENSMUST00000026740 Rbm38Q62176 237 aaKnown RBP11.86□□□□□ -0.51
Col7a1-201ENSMUST00000026740 Q9CQM1 111 aa11.86□□□□□ -0.51
Col7a1-201ENSMUST00000026740 Supt4h1bQ9Z199 117 aa11.86□□□□□ -0.51
Col7a1-201ENSMUST00000026740 Neurog3P70661 214 aa11.86□□□□□ -0.51
Col7a1-201ENSMUST00000026740 Ighv1-76A0A0G2JFE9 117 aa11.86□□□□□ -0.51
Col7a1-201ENSMUST00000026740 Igkv6-14A0A140T8P1 115 aa11.86□□□□□ -0.51
Col7a1-201ENSMUST00000026740 Insl3O09107 122 aa11.86□□□□□ -0.51
Col7a1-201ENSMUST00000026740 P01727 129 aa11.86□□□□□ -0.51
Col7a1-201ENSMUST00000026740 Lime1Q9EQR5 269 aa11.86□□□□□ -0.51
Col7a1-201ENSMUST00000026740 Tm4sf20Q9CQY8 226 aa11.86□□□□□ -0.51
Col7a1-201ENSMUST00000026740 E030025P04RikA2A6V5 185 aa11.85□□□□□ -0.51
Col7a1-201ENSMUST00000026740 Igkv15-103A0A140T8P3 115 aa11.85□□□□□ -0.51
Col7a1-201ENSMUST00000026740 Ly6g6eQ8K1T6 166 aa11.85□□□□□ -0.51
Col7a1-201ENSMUST00000026740 8030423J24RikQ9CX45 142 aa11.85□□□□□ -0.51
Col7a1-201ENSMUST00000026740 Gm28269A0A087WSG3 125 aa11.85□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 78.9 ms