RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 DscamQ9ERC8 2013 aa8.75□□□□□ -1.01
Msh3-201ENSMUST00000022220 Epg5Q80TA9 2572 aa8.75□□□□□ -1.01
Msh3-201ENSMUST00000022220 Gm45844A0A1B0GRQ2 137 aa8.75□□□□□ -1.01
Msh3-201ENSMUST00000022220 Fam240bJ3QMB3 78 aa8.75□□□□□ -1.01
Msh3-201ENSMUST00000022220 AdipoqQ60994 247 aa8.75□□□□□ -1.01
Msh3-201ENSMUST00000022220 Olfr433Q7TRV9 314 aa8.75□□□□□ -1.01
Msh3-201ENSMUST00000022220 Gm4763Q8CFJ5 196 aa8.75□□□□□ -1.01
Msh3-201ENSMUST00000022220 Mcrip2Q9CQB2 160 aaKnown RBP8.75□□□□□ -1.01
Msh3-201ENSMUST00000022220 Zfp493E9Q1L8 384 aa8.75□□□□□ -1.01
Msh3-201ENSMUST00000022220 CntfrO88507 372 aa8.75□□□□□ -1.01
Msh3-201ENSMUST00000022220 Tmem177Q8BPE4 311 aa8.75□□□□□ -1.01
Msh3-201ENSMUST00000022220 Tex48Q9DA81 110 aa8.75□□□□□ -1.01
Msh3-201ENSMUST00000022220 Mrpl32Q9DCI9 187 aaKnown RBP8.75□□□□□ -1.01
Msh3-201ENSMUST00000022220 Plcxd2B2RXA1 340 aa8.74□□□□□ -1.01
Msh3-201ENSMUST00000022220 Prok1Q14A28 105 aa8.74□□□□□ -1.01
Msh3-201ENSMUST00000022220 Slc35d2Q762D5 326 aa8.74□□□□□ -1.01
Msh3-201ENSMUST00000022220 Sec11aQ9R0P6 179 aa8.74□□□□□ -1.01
Msh3-201ENSMUST00000022220 PdfS4R2K0 231 aa8.74□□□□□ -1.01
Msh3-201ENSMUST00000022220 H2-DMb1P35737 261 aa8.74□□□□□ -1.01
Msh3-201ENSMUST00000022220 Fabp6P51162 128 aa8.74□□□□□ -1.01
Msh3-201ENSMUST00000022220 A930003A15RikQ3U552 87 aa8.74□□□□□ -1.01
Msh3-201ENSMUST00000022220 Vmn1r197Q8R265 298 aa8.74□□□□□ -1.01
Msh3-201ENSMUST00000022220 Olfr498Q8VEW2 330 aa8.74□□□□□ -1.01
Msh3-201ENSMUST00000022220 Rpp25lQ99JH1 163 aa8.74□□□□□ -1.01
Msh3-201ENSMUST00000022220 Zfp462B1AWL2 2495 aaKnown RBP8.74□□□□□ -1.01
Msh3-201ENSMUST00000022220 Trav6d-3A0A075B6B3 112 aa8.74□□□□□ -1.01
Msh3-201ENSMUST00000022220 Gm12057A0A087WR21 115 aa8.74□□□□□ -1.01
Msh3-201ENSMUST00000022220 CtsgP28293 261 aa8.74□□□□□ -1.01
Msh3-201ENSMUST00000022220 Trav6-3Q5R1E6 112 aa8.74□□□□□ -1.01
Msh3-201ENSMUST00000022220 Igfbpl1Q80W15 270 aa8.74□□□□□ -1.01
Msh3-201ENSMUST00000022220 Olfr982Q8VGB3 321 aa8.74□□□□□ -1.01
Msh3-201ENSMUST00000022220 Gatad1Q920S3 266 aa8.74□□□□□ -1.01
Msh3-201ENSMUST00000022220 Tmem167aQ9CR64 72 aa8.74□□□□□ -1.01
Msh3-201ENSMUST00000022220 Spata45Q9CVW4 97 aa8.74□□□□□ -1.01
Msh3-201ENSMUST00000022220 Ssbp2Q9CYZ8 361 aa8.74□□□□□ -1.01
Msh3-201ENSMUST00000022220 Erg28Q9ERY9 140 aa8.74□□□□□ -1.01
Msh3-201ENSMUST00000022220 Pla2g2eQ9QUL3 142 aa8.74□□□□□ -1.01
Msh3-201ENSMUST00000022220 Ighv9-4A0A0A6YWH6 117 aa8.73□□□□□ -1.01
Msh3-201ENSMUST00000022220 Olfr218E9PWV2 313 aa8.73□□□□□ -1.01
Msh3-201ENSMUST00000022220 Wt1P22561 449 aa8.73□□□□□ -1.01
Msh3-201ENSMUST00000022220 Mrps21P58059 87 aa8.73□□□□□ -1.01
Msh3-201ENSMUST00000022220 ManfQ9CXI5 179 aaKnown RBP8.73□□□□□ -1.01
Msh3-201ENSMUST00000022220 1700008P02RikQ9DAJ8 175 aa8.73□□□□□ -1.01
Msh3-201ENSMUST00000022220 Arpc1aQ9R0Q6 370 aa8.73□□□□□ -1.01
Msh3-201ENSMUST00000022220 P01736 120 aa8.73□□□□□ -1.01
Msh3-201ENSMUST00000022220 Gm10192Q3V0S1 108 aa8.73□□□□□ -1.01
Msh3-201ENSMUST00000022220 Znf146Q8BQN6 292 aa8.73□□□□□ -1.01
Msh3-201ENSMUST00000022220 Olfr481Q8VGI5 312 aa8.73□□□□□ -1.01
Msh3-201ENSMUST00000022220 Tnfrsf23Q9ER63 176 aa8.73□□□□□ -1.01
Msh3-201ENSMUST00000022220 Olfr1337A2ACY8 315 aa8.73□□□□□ -1.01
Msh3-201ENSMUST00000022220 Col8a1Q00780 744 aa8.73□□□□□ -1.01
Msh3-201ENSMUST00000022220 ArtnQ9Z0L2 224 aa8.73□□□□□ -1.01
Msh3-201ENSMUST00000022220 Tns1E9Q0S6 1888 aaKnown RBP8.73□□□□□ -1.01
Msh3-201ENSMUST00000022220 Gata3P23772 443 aa8.73□□□□□ -1.01
Msh3-201ENSMUST00000022220 Adrb3P25962 400 aa8.73□□□□□ -1.01
Msh3-201ENSMUST00000022220 Prop1P97458 223 aa8.73□□□□□ -1.01
Msh3-201ENSMUST00000022220 Tcrg-C2A0A075B5Z2 167 aa8.72□□□□□ -1.01
Msh3-201ENSMUST00000022220 P01853 167 aa8.72□□□□□ -1.01
Msh3-201ENSMUST00000022220 Ca1P13634 261 aa8.72□□□□□ -1.01
Msh3-201ENSMUST00000022220 Ang6Q5GAN0 147 aa8.72□□□□□ -1.01
Msh3-201ENSMUST00000022220 Stxbp6Q8R3T5 210 aa8.72□□□□□ -1.01
Msh3-201ENSMUST00000022220 Tctex1d1Q9D5I4 173 aa8.72□□□□□ -1.01
Msh3-201ENSMUST00000022220 Rnf125Q9D9R0 233 aa8.72□□□□□ -1.01
Msh3-201ENSMUST00000022220 Cacng7P62956 275 aa8.72□□□□□ -1.01
Msh3-201ENSMUST00000022220 Tmem190Q9D2E9 166 aa8.72□□□□□ -1.01
Msh3-201ENSMUST00000022220 Cend1Q9JKC6 149 aa8.72□□□□□ -1.01
Msh3-201ENSMUST00000022220 IcosQ9WVS0 200 aa8.72□□□□□ -1.01
Msh3-201ENSMUST00000022220 Trbv17A0A140T8P8 114 aa8.72□□□□□ -1.01
Msh3-201ENSMUST00000022220 Olfr364-ps1A0A140T8Q2 307 aa8.72□□□□□ -1.01
Msh3-201ENSMUST00000022220 Defa3P28310 93 aa8.72□□□□□ -1.01
Msh3-201ENSMUST00000022220 Defa10P50708 93 aa8.72□□□□□ -1.01
Msh3-201ENSMUST00000022220 Defa15P50713 93 aa8.72□□□□□ -1.01
Msh3-201ENSMUST00000022220 Prrx2Q06348 247 aa8.72□□□□□ -1.01
Msh3-201ENSMUST00000022220 Iba57Q8CAK1 358 aaKnown RBP8.72□□□□□ -1.01
Msh3-201ENSMUST00000022220 Olfr981Q8VEU2 310 aa8.72□□□□□ -1.01
Msh3-201ENSMUST00000022220 Immp1lQ9CQU8 166 aa8.72□□□□□ -1.01
Msh3-201ENSMUST00000022220 Cml3Q9JIY8 226 aa8.72□□□□□ -1.01
Msh3-201ENSMUST00000022220 Nbeal1E9PYP2 2688 aa8.71□□□□□ -1.01
Msh3-201ENSMUST00000022220 P01649 108 aa8.71□□□□□ -1.01
Msh3-201ENSMUST00000022220 Sub1P11031 127 aaKnown RBP8.71□□□□□ -1.01
Msh3-201ENSMUST00000022220 Edn1P22387 202 aa8.71□□□□□ -1.01
Msh3-201ENSMUST00000022220 Tmem189Q99LQ7 271 aa8.71□□□□□ -1.01
Msh3-201ENSMUST00000022220 Gfra1P97785 468 aa8.71□□□□□ -1.02
Msh3-201ENSMUST00000022220 A230072I06RikQ3UUJ8 172 aa8.71□□□□□ -1.02
Msh3-201ENSMUST00000022220 Lypd6Q8BPP5 171 aa8.71□□□□□ -1.02
Msh3-201ENSMUST00000022220 Gm17324Q8C6J8 137 aa8.71□□□□□ -1.02
Msh3-201ENSMUST00000022220 Atxn7l1Q9CZ05 146 aa8.71□□□□□ -1.02
Msh3-201ENSMUST00000022220 Trav9d-1A0A075B699 112 aa8.71□□□□□ -1.02
Msh3-201ENSMUST00000022220 Gm5157A0A087WRH8 301 aa8.71□□□□□ -1.02
Msh3-201ENSMUST00000022220 Olfr1192-ps1A0A1L1SRD7 309 aa8.71□□□□□ -1.02
Msh3-201ENSMUST00000022220 Insl3O09107 122 aa8.71□□□□□ -1.02
Msh3-201ENSMUST00000022220 AmelxP63277 210 aa8.71□□□□□ -1.02
Msh3-201ENSMUST00000022220 C1qtnf5Q8K479 243 aa8.71□□□□□ -1.02
Msh3-201ENSMUST00000022220 Gm21874J3QNZ6 232 aa8.7□□□□□ -1.02
Msh3-201ENSMUST00000022220 BtcQ05928 177 aa8.7□□□□□ -1.02
Msh3-201ENSMUST00000022220 Olfr1209Q3SXJ3 310 aa8.7□□□□□ -1.02
Msh3-201ENSMUST00000022220 Slamf7Q8BHK6 333 aa8.7□□□□□ -1.02
Msh3-201ENSMUST00000022220 Vmn1r216Q8R257 298 aa8.7□□□□□ -1.02
Msh3-201ENSMUST00000022220 Hcfc2Q9D968 241 aa8.7□□□□□ -1.02
Msh3-201ENSMUST00000022220 Trav14n-3A0A075B645 120 aa8.7□□□□□ -1.02
Retrieved 100 of 22,080 RNA–protein pairs in 34.9 ms