RNA–Protein interactions for RNA: ENSMUST00000015981.11

Sqstm1-201, Transcript of Sequestosome-1, mousemouse

TSL 1 (best) BASIC

Gene Sqstm1, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1-201ENSMUST00000015981 Gm15107B1B0X0 449 aa14.05□□□□□ -0.16
Sqstm1-201ENSMUST00000015981 Gm15097E9QA14 449 aa14.05□□□□□ -0.16
Sqstm1-201ENSMUST00000015981 Colca2F8VPY8 239 aa14.05□□□□□ -0.16
Sqstm1-201ENSMUST00000015981 Dynlrb1P62627 96 aa14.05□□□□□ -0.16
Sqstm1-201ENSMUST00000015981 Slc25a16Q8C0K5 332 aa14.05□□□□□ -0.16
Sqstm1-201ENSMUST00000015981 F930015N05RikQ8C3A3 210 aa14.05□□□□□ -0.16
Sqstm1-201ENSMUST00000015981 Trav5-1A0A075B5Z7 114 aa14.04□□□□□ -0.16
Sqstm1-201ENSMUST00000015981 Sh3bgrl2Q8BG73 107 aa14.04□□□□□ -0.16
Sqstm1-201ENSMUST00000015981 Gm5150Q1AN92 299 aa14.04□□□□□ -0.16
Sqstm1-201ENSMUST00000015981 Olfr1256Q8VGP1 306 aa14.04□□□□□ -0.16
Sqstm1-201ENSMUST00000015981 Slamf6Q9ET39 351 aa14.04□□□□□ -0.16
Sqstm1-201ENSMUST00000015981 Col9a1Q05722 921 aa14.03□□□□□ -0.16
Sqstm1-201ENSMUST00000015981 Vps13cQ8BX70 3748 aa14.03□□□□□ -0.16
Sqstm1-201ENSMUST00000015981 Odf3Q920N1 254 aa14.03□□□□□ -0.16
Sqstm1-201ENSMUST00000015981 Slc25a39Q9D8K8 359 aa14.03□□□□□ -0.16
Sqstm1-201ENSMUST00000015981 Ighv1-7A0A075B5T7 117 aa14.02□□□□□ -0.16
Sqstm1-201ENSMUST00000015981 Gosr1O88630 250 aa14.02□□□□□ -0.16
Sqstm1-201ENSMUST00000015981 Fgf6P21658 208 aa14.02□□□□□ -0.16
Sqstm1-201ENSMUST00000015981 Lyg1Q9D7Q0 197 aa14.02□□□□□ -0.16
Sqstm1-201ENSMUST00000015981 TracA0A075B662 137 aa14.02□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 Cox7cP17665 63 aa14.02□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 Gng4P50153 75 aa14.02□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 Odf3l1Q810P2 275 aa14.02□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 Dkk2Q9QYZ8 259 aa14.02□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 Tmem8bB1AWJ5 472 aa14.01□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 Olfr1185-ps1F6XP16 303 aa14.01□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 Gm20517G3UVU6 152 aa14.01□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 Gimap1P70224 277 aa14.01□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 Tff3Q62395 81 aa14.01□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 MycbQ6P8Z1 170 aa14.01□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 QrfpQ8CE23 124 aa14.01□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 Olfr365Q8VFT2 312 aa14.01□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 Atp6v0bQ91V37 205 aa14.01□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 Tmem92B7ZWI3 162 aa14.01□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 Ctsll3Q3ULP7 331 aa14.01□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 Gm5464Q3UY29 175 aa14.01□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 Muc15Q8C6Z1 331 aa14.01□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 Shank1D3YZU1 2167 aa14.01□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 Cep295Q8BQ48 2412 aa14.01□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 Trdv1A0A075B657 112 aa14□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 Esp38A8R0X1 80 aa14□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 Cd5P13379 494 aa14□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 Gm9949Q8C9F4 104 aa14□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 Frem1Q684R7 2191 aa14□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 Esp4A8R0T8 117 aa14□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 Psmg4P0C7N9 123 aa14□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 Gm10645Q3UPY1 145 aa14□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 Olfr322Q5NCC8 327 aa14□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 Olfr317Q5NCD6 327 aa14□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 PdpnQ62011 172 aa14□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 Stxbp6Q8R3T5 210 aa14□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 4930412O13RikQ9D5M9 106 aa14□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 TprF6ZDS4 2431 aaKnown RBP14□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 PoleQ9WVF7 2283 aa13.99□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 Q3UNZ8 350 aa13.99□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 Atxn7l1Q9CZ05 146 aa13.99□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 Tmem238lA0A1B0GS74 79 aa13.99□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 Cd27P41272 250 aa13.98□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 Gm5157A0A087WRH8 301 aa13.98□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 Trav3-1Q5R1I8 114 aa13.98□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 BC048562Q80ZQ7 204 aa13.98□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 Olfr1431Q8VF59 312 aa13.98□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 Fbxl15Q91W61 300 aa13.98□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 Obox1Q9D350 204 aa13.98□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 Asxl3Q8C4A5 2259 aa13.98□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 CadB2RQC6 2225 aa13.98□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 Ighv5-9A0A075B5Q2 117 aa13.98□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 Gpx1P11352 201 aa13.98□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 Prop1P97458 223 aa13.98□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 Chac2Q9CQG1 178 aa13.98□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 Tcf24V9GWT9 166 aa13.98□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 Abca7Q91V24 2159 aa13.97□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 Trav9d-1A0A075B699 112 aa13.97□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 Defa37K9J724 93 aa13.97□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 Insl3O09107 122 aa13.97□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 P04944 107 aa13.97□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 Defa5P28312 93 aa13.97□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 Hint1P70349 126 aaKnown RBP13.97□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 Srsf6Q3TWW8 339 aaKnown RBP13.97□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 Vmn1r63Q9EPT1 300 aa13.97□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 Gm29289A0A087WPY7 166 aa13.97□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 Gm4064A0A087WR82 380 aa13.97□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 Gm10352B2RWR6 380 aa13.97□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 Gm21693J3QK27 380 aa13.97□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 Rbmy1a1O35698 380 aa13.97□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 Trav2Q5R1I9 109 aa13.97□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 Lamtor5Q9D1L9 91 aa13.97□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 Ube2l6Q9QZU9 153 aa13.97□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 Ighv7-4A0A0A6YXL5 121 aa13.96□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 Olfr235E9Q9Z6 312 aa13.96□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 Vsig4F6TUL9 280 aa13.96□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 Rnf5O35445 180 aa13.96□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 PlnP61014 52 aa13.96□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 Dlx1Q64317 255 aa13.96□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 Shisa9Q9CZN4 424 aa13.96□□□□□ -0.17
Sqstm1-201ENSMUST00000015981 Ighv1-20A0A0A6YX66 117 aa13.96□□□□□ -0.18
Sqstm1-201ENSMUST00000015981 Igkv19-93A0A0G2JFZ3 115 aa13.96□□□□□ -0.18
Sqstm1-201ENSMUST00000015981 Rasl11aQ6IMB1 242 aa13.96□□□□□ -0.18
Sqstm1-201ENSMUST00000015981 Map1lc3aQ91VR7 121 aa13.96□□□□□ -0.18
Sqstm1-201ENSMUST00000015981 Q9D131 166 aa13.96□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 47.1 ms