RNA–Protein interactions for RNA: ENST00000639953.1

ATM-229, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-229ENST00000639953 SCGB1C2P0DMR2 95 aa3.9□□□□□ -1.79
ATM-229ENST00000639953 HERV-K104P63124 156 aa3.9□□□□□ -1.79
ATM-229ENST00000639953 HIGD2BQ4VC39 106 aa3.9□□□□□ -1.79
ATM-229ENST00000639953 C6orf226Q5I0X4 101 aa3.9□□□□□ -1.79
ATM-229ENST00000639953 KRTAP7-1Q8IUC3 87 aa3.9□□□□□ -1.79
ATM-229ENST00000639953 Q8IZM0 81 aa3.9□□□□□ -1.79
ATM-229ENST00000639953 LINC01561Q8N1V8 128 aa3.9□□□□□ -1.79
ATM-229ENST00000639953 ANKRD29Q8N6D5 301 aa3.9□□□□□ -1.79
ATM-229ENST00000639953 C15orf56Q8N910 161 aa3.9□□□□□ -1.79
ATM-229ENST00000639953 SMIM11BQ8TCY0 68 aa3.9□□□□□ -1.79
ATM-229ENST00000639953 UBE2WQ96B02 151 aa3.9□□□□□ -1.79
ATM-229ENST00000639953 SND1-IT1Q9HBX3 110 aa3.9□□□□□ -1.79
ATM-229ENST00000639953 C6orf48Q9UBA6 75 aa3.9□□□□□ -1.79
ATM-229ENST00000639953 RYR1P21817 5038 aa3.89□□□□□ -1.79
ATM-229ENST00000639953 KIAA1109Q2LD37 5005 aa3.89□□□□□ -1.79
ATM-229ENST00000639953 TRAV8-4A0A0B4J246 113 aa3.89□□□□□ -1.79
ATM-229ENST00000639953 IBA57-AS1B1ANH7 110 aa3.89□□□□□ -1.79
ATM-229ENST00000639953 LST1O00453 97 aa3.89□□□□□ -1.79
ATM-229ENST00000639953 SMAGPQ0VAQ4 97 aa3.89□□□□□ -1.79
ATM-229ENST00000639953 Q1RN00 199 aa3.89□□□□□ -1.79
ATM-229ENST00000639953 LINC01600Q96MT4 127 aa3.89□□□□□ -1.79
ATM-229ENST00000639953 DNAH5Q8TE73 4624 aa3.89□□□□□ -1.79
ATM-229ENST00000639953 HERC2O95714 4834 aa3.88□□□□□ -1.79
ATM-229ENST00000639953 SLC25A20O43772 301 aa3.88□□□□□ -1.79
ATM-229ENST00000639953 SPAG11BQ08648 103 aa3.88□□□□□ -1.79
ATM-229ENST00000639953 CIRBPQ14011 172 aaKnown RBP3.88□□□□□ -1.79
ATM-229ENST00000639953 TRBV10-2A0A0K0K1G8 114 aa3.87□□□□□ -1.79
ATM-229ENST00000639953 PSCAO43653 123 aa3.87□□□□□ -1.79
ATM-229ENST00000639953 KRTAP5-9P26371 169 aa3.87□□□□□ -1.79
ATM-229ENST00000639953 Q6ZRU5 148 aa3.87□□□□□ -1.79
ATM-229ENST00000639953 PPDPFQ9H3Y8 114 aa3.87□□□□□ -1.79
ATM-229ENST00000639953 TRBV20-1A0A075B6N2 111 aa3.86□□□□□ -1.79
ATM-229ENST00000639953 IGKV2D-24A0A075B6R9 120 aa3.86□□□□□ -1.79
ATM-229ENST00000639953 A0A087WTM6 91 aa3.86□□□□□ -1.79
ATM-229ENST00000639953 TEX49A0A1B0GTD5 131 aa3.86□□□□□ -1.79
ATM-229ENST00000639953 LRCOL1A6NCL2 159 aa3.86□□□□□ -1.79
ATM-229ENST00000639953 NCR3O14931 201 aa3.86□□□□□ -1.79
ATM-229ENST00000639953 LECT2O14960 151 aa3.86□□□□□ -1.79
ATM-229ENST00000639953 RPL28P46779 137 aaKnown RBP3.86□□□□□ -1.79
ATM-229ENST00000639953 ATXN8Q156A1 80 aa3.86□□□□□ -1.79
ATM-229ENST00000639953 LRP1BQ9NZR2 4599 aa3.86□□□□□ -1.79
ATM-229ENST00000639953 PCLOQ9Y6V0 5065 aa3.85□□□□□ -1.79
ATM-229ENST00000639953 C16orf90A8MZG2 172 aa3.85□□□□□ -1.79
ATM-229ENST00000639953 TEN1Q86WV5 123 aa3.85□□□□□ -1.79
ATM-229ENST00000639953 VPS25Q9BRG1 176 aa3.85□□□□□ -1.79
ATM-229ENST00000639953 XAGE1AQ9HD64 81 aa3.85□□□□□ -1.79
ATM-229ENST00000639953 APOBP04114 4563 aaKnown RBP3.85□□□□□ -1.79
ATM-229ENST00000639953 M0QXV9 152 aa3.84□□□□□ -1.79
ATM-229ENST00000639953 CRPP02741 224 aa3.84□□□□□ -1.79
ATM-229ENST00000639953 MT-ATP8P03928 68 aa3.84□□□□□ -1.79
ATM-229ENST00000639953 CKS1BP61024 79 aa3.84□□□□□ -1.79
ATM-229ENST00000639953 PPDPFLQ8WWR9 84 aa3.84□□□□□ -1.79
ATM-229ENST00000639953 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.83□□□□□ -1.8
ATM-229ENST00000639953 GVQW2A0A096LPI5 108 aaPredicted RBP3.83□□□□□ -1.8
ATM-229ENST00000639953 K7ERU9 68 aa3.83□□□□□ -1.8
ATM-229ENST00000639953 BAALC-AS2P0C853 105 aa3.83□□□□□ -1.8
ATM-229ENST00000639953 XGP55808 180 aa3.83□□□□□ -1.8
ATM-229ENST00000639953 Q8N814 137 aa3.83□□□□□ -1.8
ATM-229ENST00000639953 OR13C6PQ8NH95 151 aa3.83□□□□□ -1.8
ATM-229ENST00000639953 HSPG2P98160 4391 aa3.83□□□□□ -1.8
ATM-229ENST00000639953 TRAV13-2A0A0B4J235 113 aa3.82□□□□□ -1.8
ATM-229ENST00000639953 FAM168BA1KXE4 195 aa3.82□□□□□ -1.8
ATM-229ENST00000639953 VPREB1P12018 145 aa3.82□□□□□ -1.8
ATM-229ENST00000639953 SERTAD4-AS1Q5TG53 156 aa3.82□□□□□ -1.8
ATM-229ENST00000639953 Q6ZRP5 223 aa3.82□□□□□ -1.8
ATM-229ENST00000639953 RMI2Q96E14 147 aa3.82□□□□□ -1.8
ATM-229ENST00000639953 ABCA13Q86UQ4 5058 aa3.81□□□□□ -1.8
ATM-229ENST00000639953 TRBV10-3A0A0K0K1G6 114 aa3.81□□□□□ -1.8
ATM-229ENST00000639953 USP17L23D6RBM5 183 aa3.81□□□□□ -1.8
ATM-229ENST00000639953 NDUFC2O95298 119 aa3.81□□□□□ -1.8
ATM-229ENST00000639953 TRACP01848 142 aa3.81□□□□□ -1.8
ATM-229ENST00000639953 KRTAP10-1P60331 282 aa3.81□□□□□ -1.8
ATM-229ENST00000639953 RPL18AQ02543 176 aaKnown RBP3.81□□□□□ -1.8
ATM-229ENST00000639953 SMCR5Q8TEV8 140 aa3.81□□□□□ -1.8
ATM-229ENST00000639953 LINC00167Q96N53 147 aa3.81□□□□□ -1.8
ATM-229ENST00000639953 SIGMAR1Q99720 223 aa3.81□□□□□ -1.8
ATM-229ENST00000639953 DNAH8Q96JB1 4490 aa3.81□□□□□ -1.8
ATM-229ENST00000639953 H3BT86 120 aa3.8□□□□□ -1.8
ATM-229ENST00000639953 IGLV6-57P01721 117 aa3.8□□□□□ -1.8
ATM-229ENST00000639953 CXCL5P42830 114 aa3.8□□□□□ -1.8
ATM-229ENST00000639953 HAMPP81172 84 aa3.8□□□□□ -1.8
ATM-229ENST00000639953 COX17Q14061 63 aa3.8□□□□□ -1.8
ATM-229ENST00000639953 GAGE2EQ4V326 116 aa3.8□□□□□ -1.8
ATM-229ENST00000639953 LYRM7Q5U5X0 104 aa3.8□□□□□ -1.8
ATM-229ENST00000639953 CAMK2N2Q96S95 79 aa3.8□□□□□ -1.8
ATM-229ENST00000639953 GAGE2DQ9UEU5 116 aa3.8□□□□□ -1.8
ATM-229ENST00000639953 A0A1B0GV72 72 aa3.79□□□□□ -1.8
ATM-229ENST00000639953 COX6CP09669 75 aa3.79□□□□□ -1.8
ATM-229ENST00000639953 C6orf99Q4VX62 202 aa3.79□□□□□ -1.8
ATM-229ENST00000639953 KRTAP11-1Q8IUC1 163 aa3.79□□□□□ -1.8
ATM-229ENST00000639953 C2orf48Q96LS8 159 aa3.79□□□□□ -1.8
ATM-229ENST00000639953 OBSCN-AS1Q96MR7 158 aa3.79□□□□□ -1.8
ATM-229ENST00000639953 VPS13BQ7Z7G8 4022 aa3.78□□□□□ -1.8
ATM-229ENST00000639953 SYCNQ0VAF6 134 aa3.78□□□□□ -1.8
ATM-229ENST00000639953 LINC00575Q6W349 94 aa3.78□□□□□ -1.8
ATM-229ENST00000639953 CDK2AP2O75956 126 aa3.77□□□□□ -1.81
ATM-229ENST00000639953 C7orf33Q8WU49 177 aa3.77□□□□□ -1.81
ATM-229ENST00000639953 A0A1W2PNN7 141 aa3.76□□□□□ -1.81
ATM-229ENST00000639953 NDUFC2-KCTD14E9PQ53 114 aa3.76□□□□□ -1.81
ATM-229ENST00000639953 H0YGX0 51 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms