RNA–Protein interactions for RNA: ENST00000638448.1

GYPB-216, Transcript of glycophorin B (MNS blood group), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GYPB, Length 363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-216ENST00000638448 MED14O60244 1454 aa0.03□□□□□ -2.4
GYPB-216ENST00000638448 FLNBO75369 2602 aaKnown RBP0.03□□□□□ -2.4
GYPB-216ENST00000638448 MAP3K4Q9Y6R4 1608 aa0.03□□□□□ -2.4
GYPB-216ENST00000638448 H3BUT2 72 aa0.03□□□□□ -2.4
GYPB-216ENST00000638448 RGPD1P0DJD0 1748 aa0.03□□□□□ -2.4
GYPB-216ENST00000638448 BCORQ6W2J9 1755 aa0.03□□□□□ -2.4
GYPB-216ENST00000638448 DCHS2Q6V1P9 2916 aa0.03□□□□□ -2.41
GYPB-216ENST00000638448 NCOA2Q15596 1464 aa0.03□□□□□ -2.41
GYPB-216ENST00000638448 URB2Q14146 1524 aaKnown RBP0.03□□□□□ -2.41
GYPB-216ENST00000638448 QSER1Q2KHR3 1735 aa0.02□□□□□ -2.41
GYPB-216ENST00000638448 SUPT6HQ7KZ85 1726 aaKnown RBP0.02□□□□□ -2.41
GYPB-216ENST00000638448 PCNX1Q96RV3 2341 aa0.02□□□□□ -2.41
GYPB-216ENST00000638448 NBASA2RRP1 2371 aa0.02□□□□□ -2.41
GYPB-216ENST00000638448 A0A087WXM4 84 aa0.02□□□□□ -2.41
GYPB-216ENST00000638448 UMAD1C9J7I0 102 aa0.02□□□□□ -2.41
GYPB-216ENST00000638448 NDUFA3O95167 84 aa0.02□□□□□ -2.41
GYPB-216ENST00000638448 IFI27P40305 119 aaPredicted RBP0.02□□□□□ -2.41
GYPB-216ENST00000638448 ATP5EP2Q5VTU8 51 aa0.02□□□□□ -2.41
GYPB-216ENST00000638448 COX6B2Q6YFQ2 88 aa0.02□□□□□ -2.41
GYPB-216ENST00000638448 STAB1Q9NY15 2570 aa0.02□□□□□ -2.41
GYPB-216ENST00000638448 TMEM131LA2VDJ0 1609 aa0.02□□□□□ -2.41
GYPB-216ENST00000638448 HECTD1Q9ULT8 2610 aa0.01□□□□□ -2.41
GYPB-216ENST00000638448 LRP2P98164 4655 aa0.01□□□□□ -2.41
GYPB-216ENST00000638448 CREBBPQ92793 2442 aa0.01□□□□□ -2.41
GYPB-216ENST00000638448 IFI6P09912 130 aa0.01□□□□□ -2.41
GYPB-216ENST00000638448 DEFB135Q30KP9 77 aa0.01□□□□□ -2.41
GYPB-216ENST00000638448 DEFB121Q5J5C9 76 aa0.01□□□□□ -2.41
GYPB-216ENST00000638448 BVES-AS1Q5T3Y7 98 aa0.01□□□□□ -2.41
GYPB-216ENST00000638448 ERVK-7P63135 1459 aa0.01□□□□□ -2.41
GYPB-216ENST00000638448 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.01□□□□□ -2.41
GYPB-216ENST00000638448 USP32Q8NFA0 1604 aa0.01□□□□□ -2.41
GYPB-216ENST00000638448 RGPD8O14715 1765 aaPredicted RBP0□□□□□ -2.41
GYPB-216ENST00000638448 SMIM13P0DJ93 91 aa0□□□□□ -2.41
GYPB-216ENST00000638448 PREX1Q8TCU6 1659 aa0□□□□□ -2.41
GYPB-216ENST00000638448 RGPD5Q99666 1765 aa0□□□□□ -2.41
GYPB-216ENST00000638448 ARHGAP35Q9NRY4 1499 aa0□□□□□ -2.41
GYPB-216ENST00000638448 LTN1O94822 1766 aa-0.01□□□□□ -2.41
GYPB-216ENST00000638448 DCAF1Q9Y4B6 1507 aa-0.01□□□□□ -2.41
GYPB-216ENST00000638448 STAB2Q8WWQ8 2551 aa-0.01□□□□□ -2.41
GYPB-216ENST00000638448 SPRR2BP35325 72 aa-0.01□□□□□ -2.41
GYPB-216ENST00000638448 NREPQ16612 68 aa-0.01□□□□□ -2.41
GYPB-216ENST00000638448 PRO3102Q9H379 93 aa-0.01□□□□□ -2.41
GYPB-216ENST00000638448 TENM2Q9NT68 2774 aa-0.01□□□□□ -2.41
GYPB-216ENST00000638448 LRP1BQ9NZR2 4599 aa-0.01□□□□□ -2.41
GYPB-216ENST00000638448 PIK3C2BO00750 1634 aa-0.02□□□□□ -2.41
GYPB-216ENST00000638448 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.02□□□□□ -2.41
GYPB-216ENST00000638448 ABCC1P33527 1531 aa-0.02□□□□□ -2.41
GYPB-216ENST00000638448 SETD2Q9BYW2 2564 aaPredicted RBP-0.02□□□□□ -2.41
GYPB-216ENST00000638448 NDUFA4O00483 81 aa-0.02□□□□□ -2.41
GYPB-216ENST00000638448 C3orf79P0CE67 100 aa-0.02□□□□□ -2.41
GYPB-216ENST00000638448 LINC00158P58513 81 aa-0.02□□□□□ -2.41
GYPB-216ENST00000638448 C18orf32Q8TCD1 76 aa-0.02□□□□□ -2.41
GYPB-216ENST00000638448 SPG11Q96JI7 2443 aa-0.02□□□□□ -2.41
GYPB-216ENST00000638448 POLR1AO95602 1720 aaPredicted RBP-0.02□□□□□ -2.41
GYPB-216ENST00000638448 DOT1LQ8TEK3 1739 aa-0.02□□□□□ -2.41
GYPB-216ENST00000638448 ZANQ9Y493 2812 aa-0.02□□□□□ -2.41
GYPB-216ENST00000638448 ZNF831Q5JPB2 1677 aa-0.02□□□□□ -2.41
GYPB-216ENST00000638448 NWD1Q149M9 1564 aa-0.02□□□□□ -2.41
GYPB-216ENST00000638448 DIP2BQ9P265 1576 aa-0.02□□□□□ -2.41
GYPB-216ENST00000638448 REV3LO60673 3130 aa-0.02□□□□□ -2.41
GYPB-216ENST00000638448 MAGI3Q5TCQ9 1506 aa-0.03□□□□□ -2.41
GYPB-216ENST00000638448 KDM5DQ9BY66 1539 aa-0.03□□□□□ -2.41
GYPB-216ENST00000638448 LCE6AA0A183 80 aa-0.03□□□□□ -2.41
GYPB-216ENST00000638448 H0YGG7 62 aa-0.03□□□□□ -2.41
GYPB-216ENST00000638448 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.03□□□□□ -2.41
GYPB-216ENST00000638448 CICQ96RK0 1608 aaPredicted RBP-0.03□□□□□ -2.41
GYPB-216ENST00000638448 PKHD1P08F94 4074 aa-0.03□□□□□ -2.41
GYPB-216ENST00000638448 CCDC88BA6NC98 1476 aa-0.03□□□□□ -2.41
GYPB-216ENST00000638448 TRANK1O15050 2925 aa-0.03□□□□□ -2.42
GYPB-216ENST00000638448 TIAM2Q8IVF5 1701 aa-0.04□□□□□ -2.42
GYPB-216ENST00000638448 NBEAL1Q6ZS30 2694 aa-0.04□□□□□ -2.42
GYPB-216ENST00000638448 EPG5Q9HCE0 2579 aa-0.04□□□□□ -2.42
GYPB-216ENST00000638448 HMGA1P17096 107 aaKnown RBP-0.04□□□□□ -2.42
GYPB-216ENST00000638448 DEFA5Q01523 94 aa-0.04□□□□□ -2.42
GYPB-216ENST00000638448 ARFGEF2Q9Y6D5 1785 aa-0.04□□□□□ -2.42
GYPB-216ENST00000638448 ANKARQ7Z5J8 1434 aa-0.04□□□□□ -2.42
GYPB-216ENST00000638448 RRBP1Q9P2E9 1410 aaKnown RBP-0.04□□□□□ -2.42
GYPB-216ENST00000638448 COL6A3P12111 3177 aa-0.05□□□□□ -2.42
GYPB-216ENST00000638448 DNAH9Q9NYC9 4486 aa-0.05□□□□□ -2.42
GYPB-216ENST00000638448 C4AP0C0L4 1744 aa-0.05□□□□□ -2.42
GYPB-216ENST00000638448 C4BP0C0L5 1744 aa-0.05□□□□□ -2.42
GYPB-216ENST00000638448 AKAP13Q12802 2813 aa-0.05□□□□□ -2.42
GYPB-216ENST00000638448 NESP48681 1621 aa-0.05□□□□□ -2.42
GYPB-216ENST00000638448 CFAP74Q9C0B2 1584 aa-0.06□□□□□ -2.42
GYPB-216ENST00000638448 SPTBN4Q9H254 2564 aa-0.06□□□□□ -2.42
GYPB-216ENST00000638448 H3BVH4 76 aa-0.06□□□□□ -2.42
GYPB-216ENST00000638448 PTPN23Q9H3S7 1636 aa-0.06□□□□□ -2.42
GYPB-216ENST00000638448 ADAMTS12P58397 1594 aa-0.06□□□□□ -2.42
GYPB-216ENST00000638448 MUC2Q02817 5179 aa-0.07□□□□□ -2.42
GYPB-216ENST00000638448 SRRM2Q9UQ35 2752 aaKnown RBP-0.07□□□□□ -2.42
GYPB-216ENST00000638448 DEFB131BA0A096LNP1 70 aa-0.07□□□□□ -2.42
GYPB-216ENST00000638448 H0YAA0 97 aa-0.07□□□□□ -2.42
GYPB-216ENST00000638448 MRPL33O75394 65 aaKnown RBP-0.07□□□□□ -2.42
GYPB-216ENST00000638448 ANKRD50Q9ULJ7 1429 aa-0.07□□□□□ -2.42
GYPB-216ENST00000638448 PKD1L2Q7Z442 2459 aa-0.07□□□□□ -2.42
GYPB-216ENST00000638448 SYNE2Q8WXH0 6885 aaKnown RBP-0.07□□□□□ -2.42
GYPB-216ENST00000638448 SONP18583 2426 aaKnown RBP-0.07□□□□□ -2.42
GYPB-216ENST00000638448 SSPOA2VEC9 5147 aa-0.07□□□□□ -2.42
GYPB-216ENST00000638448 MAP3K1Q13233 1512 aa-0.08□□□□□ -2.42
GYPB-216ENST00000638448 CEP290O15078 2479 aa-0.08□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms