RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 CSAG1Q6PB30 78 aa3.2□□□□□ -1.9
SPTBN1-206ENST00000602898 MUC7Q8TAX7 377 aa3.2□□□□□ -1.9
SPTBN1-206ENST00000602898 SMG1Q96Q15 3661 aaKnown RBP3.2□□□□□ -1.9
SPTBN1-206ENST00000602898 LOC400499M0QZD8 3231 aa3.2□□□□□ -1.9
SPTBN1-206ENST00000602898 ETDCA0A1B0GVM5 59 aa3.2□□□□□ -1.9
SPTBN1-206ENST00000602898 LCE5AQ5TCM9 118 aa3.2□□□□□ -1.9
SPTBN1-206ENST00000602898 Q8NAQ8 132 aa3.2□□□□□ -1.9
SPTBN1-206ENST00000602898 HECTD1Q9ULT8 2610 aa3.2□□□□□ -1.9
SPTBN1-206ENST00000602898 TRGV2A0A075B6R0 118 aa3.2□□□□□ -1.9
SPTBN1-206ENST00000602898 C16orf74Q96GX8 76 aa3.2□□□□□ -1.9
SPTBN1-206ENST00000602898 LAMA5O15230 3695 aa3.19□□□□□ -1.9
SPTBN1-206ENST00000602898 IGLV7-46A0A075B6I9 117 aa3.19□□□□□ -1.9
SPTBN1-206ENST00000602898 CNBPP62633 177 aaKnown RBP3.19□□□□□ -1.9
SPTBN1-206ENST00000602898 ICE1Q9Y2F5 2266 aa3.19□□□□□ -1.9
SPTBN1-206ENST00000602898 CCL18P55774 89 aa3.19□□□□□ -1.9
SPTBN1-206ENST00000602898 LINC00612Q8N6U2 182 aa3.19□□□□□ -1.9
SPTBN1-206ENST00000602898 WFDC10AQ9H1F0 79 aa3.19□□□□□ -1.9
SPTBN1-206ENST00000602898 KAAG1Q9UBP8 84 aa3.19□□□□□ -1.9
SPTBN1-206ENST00000602898 A0A096LNT2 108 aa3.18□□□□□ -1.9
SPTBN1-206ENST00000602898 A0A1W2PNU3 283 aaPredicted RBP3.18□□□□□ -1.9
SPTBN1-206ENST00000602898 MSMBP08118 114 aa3.18□□□□□ -1.9
SPTBN1-206ENST00000602898 FAM215AQ9Y5M1 114 aa3.18□□□□□ -1.9
SPTBN1-206ENST00000602898 CSMD1Q96PZ7 3565 aa3.18□□□□□ -1.9
SPTBN1-206ENST00000602898 SPTA1P02549 2419 aa3.18□□□□□ -1.9
SPTBN1-206ENST00000602898 A0A1W2PNM2 257 aa3.18□□□□□ -1.9
SPTBN1-206ENST00000602898 COX7B2Q8TF08 81 aa3.18□□□□□ -1.9
SPTBN1-206ENST00000602898 KCNQ1DNQ9H478 68 aa3.17□□□□□ -1.9
SPTBN1-206ENST00000602898 PTPN13Q12923 2485 aa3.17□□□□□ -1.9
SPTBN1-206ENST00000602898 SPINK7P58062 85 aa3.17□□□□□ -1.9
SPTBN1-206ENST00000602898 COX6A2Q02221 97 aa3.17□□□□□ -1.9
SPTBN1-206ENST00000602898 H3BPC8 53 aa3.16□□□□□ -1.9
SPTBN1-206ENST00000602898 COX7BP24311 80 aa3.16□□□□□ -1.9
SPTBN1-206ENST00000602898 LINC00575Q6W349 94 aa3.16□□□□□ -1.9
SPTBN1-206ENST00000602898 CFAP46Q8IYW2 2715 aa3.16□□□□□ -1.9
SPTBN1-206ENST00000602898 Q6ZR54 194 aa3.16□□□□□ -1.9
SPTBN1-206ENST00000602898 Q8N9L7 120 aa3.16□□□□□ -1.9
SPTBN1-206ENST00000602898 UNC79Q9P2D8 2635 aa3.16□□□□□ -1.9
SPTBN1-206ENST00000602898 SPAG11BQ08648 103 aa3.16□□□□□ -1.9
SPTBN1-206ENST00000602898 WNK2Q9Y3S1 2297 aa3.15□□□□□ -1.9
SPTBN1-206ENST00000602898 PRB2P02812 416 aaPredicted RBP3.15□□□□□ -1.9
SPTBN1-206ENST00000602898 LINC00158P58513 81 aa3.15□□□□□ -1.9
SPTBN1-206ENST00000602898 KLK9Q2XQG4 91 aa3.15□□□□□ -1.9
SPTBN1-206ENST00000602898 COA5Q86WW8 74 aa3.15□□□□□ -1.9
SPTBN1-206ENST00000602898 LINC00467Q9BRT7 94 aa3.15□□□□□ -1.9
SPTBN1-206ENST00000602898 ABCA2Q9BZC7 2435 aa3.15□□□□□ -1.91
SPTBN1-206ENST00000602898 PIEZO2Q9H5I5 2752 aa3.15□□□□□ -1.91
SPTBN1-206ENST00000602898 PRRC2CQ9Y520 2896 aaKnown RBP3.14□□□□□ -1.91
SPTBN1-206ENST00000602898 TYMSOSQ8TAI1 123 aa3.14□□□□□ -1.91
SPTBN1-206ENST00000602898 USP9XQ93008 2570 aaPredicted RBP3.14□□□□□ -1.91
SPTBN1-206ENST00000602898 CR1P17927 2039 aa3.14□□□□□ -1.91
SPTBN1-206ENST00000602898 DOPEY2Q9Y3R5 2298 aa3.14□□□□□ -1.91
SPTBN1-206ENST00000602898 ODF3BA8MYP8 253 aa3.14□□□□□ -1.91
SPTBN1-206ENST00000602898 ST20-AS1Q8NBB2 130 aa3.14□□□□□ -1.91
SPTBN1-206ENST00000602898 MED13LQ71F56 2210 aa3.14□□□□□ -1.91
SPTBN1-206ENST00000602898 MYO9AB2RTY4 2548 aa3.14□□□□□ -1.91
SPTBN1-206ENST00000602898 SORL1Q92673 2214 aa3.13□□□□□ -1.91
SPTBN1-206ENST00000602898 SPAG11AQ6PDA7 123 aa3.13□□□□□ -1.91
SPTBN1-206ENST00000602898 IGKV3-7A0A075B6H7 116 aa3.13□□□□□ -1.91
SPTBN1-206ENST00000602898 H0Y9P7 68 aa3.13□□□□□ -1.91
SPTBN1-206ENST00000602898 MINOS1Q5TGZ0 78 aa3.13□□□□□ -1.91
SPTBN1-206ENST00000602898 G3V318 75 aa3.13□□□□□ -1.91
SPTBN1-206ENST00000602898 LINC00483Q53H64 154 aa3.13□□□□□ -1.91
SPTBN1-206ENST00000602898 KRTAP4-7Q9BYR0 210 aa3.13□□□□□ -1.91
SPTBN1-206ENST00000602898 PANO1I0J062 215 aa3.12□□□□□ -1.91
SPTBN1-206ENST00000602898 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.12□□□□□ -1.91
SPTBN1-206ENST00000602898 TRGV4A0A0C4DH28 118 aa3.11□□□□□ -1.91
SPTBN1-206ENST00000602898 DEFB112Q30KQ8 113 aa3.11□□□□□ -1.91
SPTBN1-206ENST00000602898 KPRPQ5T749 579 aaPredicted RBP3.11□□□□□ -1.91
SPTBN1-206ENST00000602898 PDZD2O15018 2839 aa3.11□□□□□ -1.91
SPTBN1-206ENST00000602898 SPTAN1Q13813 2472 aaKnown RBP3.11□□□□□ -1.91
SPTBN1-206ENST00000602898 LYNX1G3V0Z9 82 aa3.11□□□□□ -1.91
SPTBN1-206ENST00000602898 LYNX1P0DP58 116 aa3.11□□□□□ -1.91
SPTBN1-206ENST00000602898 C9orf163Q8N9P6 203 aa3.11□□□□□ -1.91
SPTBN1-206ENST00000602898 NOTCH2Q04721 2471 aa3.11□□□□□ -1.91
SPTBN1-206ENST00000602898 C2CD3Q4AC94 2353 aa3.11□□□□□ -1.91
SPTBN1-206ENST00000602898 TACC2O95359 2948 aa3.11□□□□□ -1.91
SPTBN1-206ENST00000602898 ATMQ13315 3056 aa3.11□□□□□ -1.91
SPTBN1-206ENST00000602898 TEX15Q9BXT5 2789 aa3.1□□□□□ -1.91
SPTBN1-206ENST00000602898 LINC00959A0A1B0GUT2 108 aa3.1□□□□□ -1.91
SPTBN1-206ENST00000602898 KRTAP4-9Q9BYQ8 210 aa3.1□□□□□ -1.91
SPTBN1-206ENST00000602898 CREBBPQ92793 2442 aa3.1□□□□□ -1.91
SPTBN1-206ENST00000602898 ROS1P08922 2347 aa3.1□□□□□ -1.91
SPTBN1-206ENST00000602898 IGKV3-20P01619 116 aa3.1□□□□□ -1.91
SPTBN1-206ENST00000602898 Q6ZQY7 126 aa3.1□□□□□ -1.91
SPTBN1-206ENST00000602898 KLK12Q9UKR0 248 aa3.1□□□□□ -1.91
SPTBN1-206ENST00000602898 TEP1Q99973 2627 aaKnown RBP3.1□□□□□ -1.91
SPTBN1-206ENST00000602898 KRTAP25-1Q3LHN0 102 aa3.09□□□□□ -1.91
SPTBN1-206ENST00000602898 RHPN1-AS1Q9BWJ2 59 aa3.09□□□□□ -1.91
SPTBN1-206ENST00000602898 SPINK13Q1W4C9 94 aa3.09□□□□□ -1.91
SPTBN1-206ENST00000602898 PKDREJQ9NTG1 2253 aa3.09□□□□□ -1.91
SPTBN1-206ENST00000602898 TOMM7Q9P0U1 55 aa3.09□□□□□ -1.92
SPTBN1-206ENST00000602898 LRRK2Q5S007 2527 aa3.09□□□□□ -1.92
SPTBN1-206ENST00000602898 COL12A1Q99715 3063 aa3.08□□□□□ -1.92
SPTBN1-206ENST00000602898 SPATA8Q6RVD6 105 aa3.08□□□□□ -1.92
SPTBN1-206ENST00000602898 RP1L1Q8IWN7 2480 aaPredicted RBP3.08□□□□□ -1.92
SPTBN1-206ENST00000602898 DEFB116Q30KQ4 102 aa3.08□□□□□ -1.92
SPTBN1-206ENST00000602898 KRTAP4-11Q9BYQ6 195 aa3.08□□□□□ -1.92
SPTBN1-206ENST00000602898 TLN1Q9Y490 2541 aaKnown RBP3.07□□□□□ -1.92
SPTBN1-206ENST00000602898 ABCA12Q86UK0 2595 aa3.07□□□□□ -1.92
SPTBN1-206ENST00000602898 NBASA2RRP1 2371 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms