RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 K7ERJ3 54 aa12.53□□□□□ -0.4
SRSF1-206ENST00000583741 IGKV2D-28P01615 120 aa12.53□□□□□ -0.4
SRSF1-206ENST00000583741 FAM168BA1KXE4 195 aa12.52□□□□□ -0.41
SRSF1-206ENST00000583741 NCR3O14931 201 aa12.52□□□□□ -0.41
SRSF1-206ENST00000583741 MUC2Q02817 5179 aa12.51□□□□□ -0.41
SRSF1-206ENST00000583741 A0A1W2PNN7 141 aa12.51□□□□□ -0.41
SRSF1-206ENST00000583741 FAM19A5Q7Z5A7 132 aaPredicted RBP12.5□□□□□ -0.41
SRSF1-206ENST00000583741 LINC00337Q8N6G1 96 aa12.5□□□□□ -0.41
SRSF1-206ENST00000583741 NKAPP1Q8N9T2 125 aa12.5□□□□□ -0.41
SRSF1-206ENST00000583741 PRO1854Q9UHT4 67 aa12.49□□□□□ -0.41
SRSF1-206ENST00000583741 TRAV13-2A0A0B4J235 113 aa12.48□□□□□ -0.41
SRSF1-206ENST00000583741 TRBV10-2A0A0K0K1G8 114 aa12.48□□□□□ -0.41
SRSF1-206ENST00000583741 PSORS1C2Q9UIG4 136 aa12.48□□□□□ -0.41
SRSF1-206ENST00000583741 IGLV5-37A0A075B6J1 123 aa12.47□□□□□ -0.41
SRSF1-206ENST00000583741 COL5A1-AS1Q5SY13 56 aa12.47□□□□□ -0.41
SRSF1-206ENST00000583741 KRTAP7-1Q8IUC3 87 aa12.47□□□□□ -0.41
SRSF1-206ENST00000583741 M0R378 163 aa12.46□□□□□ -0.41
SRSF1-206ENST00000583741 OR13C6PQ8NH95 151 aa12.46□□□□□ -0.41
SRSF1-206ENST00000583741 RPL13AP40429 203 aaKnown RBP12.46□□□□□ -0.42
SRSF1-206ENST00000583741 S100A7L2Q5SY68 101 aa12.45□□□□□ -0.42
SRSF1-206ENST00000583741 C22orf24Q9Y442 160 aa12.44□□□□□ -0.42
SRSF1-206ENST00000583741 H7C2G1 150 aa12.43□□□□□ -0.42
SRSF1-206ENST00000583741 M0QXV9 152 aa12.43□□□□□ -0.42
SRSF1-206ENST00000583741 TMEM126AQ9H061 195 aa12.43□□□□□ -0.42
SRSF1-206ENST00000583741 C1orf137Q5JT78 98 aa12.42□□□□□ -0.42
SRSF1-206ENST00000583741 Q1RN00 199 aa12.41□□□□□ -0.42
SRSF1-206ENST00000583741 LBHQ53QV2 105 aaPredicted RBP12.41□□□□□ -0.42
SRSF1-206ENST00000583741 PHF5AQ7RTV0 110 aaKnown RBP12.41□□□□□ -0.42
SRSF1-206ENST00000583741 MRPL55Q7Z7F7 128 aaKnown RBP12.41□□□□□ -0.42
SRSF1-206ENST00000583741 PRR26Q8N8Z3 221 aa12.41□□□□□ -0.42
SRSF1-206ENST00000583741 TRBV10-3A0A0K0K1G6 114 aa12.4□□□□□ -0.42
SRSF1-206ENST00000583741 GAGE10A6NGK3 116 aa12.4□□□□□ -0.42
SRSF1-206ENST00000583741 TAX1BP3O14907 124 aa12.4□□□□□ -0.42
SRSF1-206ENST00000583741 IGLV6-57P01721 117 aa12.4□□□□□ -0.42
SRSF1-206ENST00000583741 TSPAN13O95857 204 aa12.4□□□□□ -0.43
SRSF1-206ENST00000583741 LINC00167Q96N53 147 aa12.39□□□□□ -0.43
SRSF1-206ENST00000583741 RPL37AP8A6NKH3 93 aa12.35□□□□□ -0.43
SRSF1-206ENST00000583741 IGLV7-43P04211 117 aa12.35□□□□□ -0.43
SRSF1-206ENST00000583741 KRTAP11-1Q8IUC1 163 aa12.35□□□□□ -0.43
SRSF1-206ENST00000583741 SMIM11BQ8TCY0 68 aa12.35□□□□□ -0.43
SRSF1-206ENST00000583741 NAA38Q9BRA0 125 aaKnown RBP12.35□□□□□ -0.43
SRSF1-206ENST00000583741 IGLV1-50A0A075B6I6 118 aa12.34□□□□□ -0.43
SRSF1-206ENST00000583741 TRAV23DV6A0A075B6W5 121 aa12.34□□□□□ -0.43
SRSF1-206ENST00000583741 C9orf118A6NHY6 69 aa12.34□□□□□ -0.43
SRSF1-206ENST00000583741 DIRC1Q969H9 104 aa12.34□□□□□ -0.43
SRSF1-206ENST00000583741 CBY1Q9Y3M2 126 aa12.34□□□□□ -0.43
SRSF1-206ENST00000583741 H3BUT2 72 aa12.34□□□□□ -0.43
SRSF1-206ENST00000583741 PSMB2P49721 201 aa12.34□□□□□ -0.43
SRSF1-206ENST00000583741 RPL28P46779 137 aaKnown RBP12.33□□□□□ -0.44
SRSF1-206ENST00000583741 H0Y9J4 135 aa12.32□□□□□ -0.44
SRSF1-206ENST00000583741 UBE2BP63146 152 aa12.32□□□□□ -0.44
SRSF1-206ENST00000583741 TRIAP1O43715 76 aa12.31□□□□□ -0.44
SRSF1-206ENST00000583741 KCNQ1DNQ9H478 68 aa12.31□□□□□ -0.44
SRSF1-206ENST00000583741 PRYO14603 147 aa12.3□□□□□ -0.44
SRSF1-206ENST00000583741 ZNF73O43830 326 aaPredicted RBP12.29□□□□□ -0.44
SRSF1-206ENST00000583741 KRTAP1-4P0C5Y4 121 aa12.29□□□□□ -0.44
SRSF1-206ENST00000583741 C6orf99Q4VX62 202 aa12.28□□□□□ -0.44
SRSF1-206ENST00000583741 COX6CP09669 75 aa12.27□□□□□ -0.44
SRSF1-206ENST00000583741 A0A1W2PPM0 123 aa12.26□□□□□ -0.45
SRSF1-206ENST00000583741 SCGB1C2P0DMR2 95 aa12.25□□□□□ -0.45
SRSF1-206ENST00000583741 LYRM7Q5U5X0 104 aa12.25□□□□□ -0.45
SRSF1-206ENST00000583741 FABP2P12104 132 aa12.24□□□□□ -0.45
SRSF1-206ENST00000583741 VAMP3Q15836 100 aa12.24□□□□□ -0.45
SRSF1-206ENST00000583741 SPRR1AP35321 89 aa12.23□□□□□ -0.45
SRSF1-206ENST00000583741 PRR4Q16378 134 aa12.23□□□□□ -0.45
SRSF1-206ENST00000583741 TRBV7-6A0A0J9YX20 115 aa12.21□□□□□ -0.45
SRSF1-206ENST00000583741 ETDCA0A1B0GVM5 59 aa12.21□□□□□ -0.46
SRSF1-206ENST00000583741 H0YGX0 51 aa12.21□□□□□ -0.46
SRSF1-206ENST00000583741 KRTAP4-16G5E9R7 235 aaPredicted RBP12.2□□□□□ -0.46
SRSF1-206ENST00000583741 COX7BP24311 80 aa12.2□□□□□ -0.46
SRSF1-206ENST00000583741 ELOF1P60002 83 aaKnown RBP12.2□□□□□ -0.46
SRSF1-206ENST00000583741 KRTAP9-2Q9BYQ4 174 aa12.2□□□□□ -0.46
SRSF1-206ENST00000583741 CLEC2BQ92478 149 aa12.19□□□□□ -0.46
SRSF1-206ENST00000583741 FAT4Q6V0I7 4981 aa12.17□□□□□ -0.46
SRSF1-206ENST00000583741 SPCS1Q9Y6A9 102 aa12.17□□□□□ -0.46
SRSF1-206ENST00000583741 A0A1B0GV90 55 aa12.16□□□□□ -0.46
SRSF1-206ENST00000583741 B5MCH6 92 aa12.16□□□□□ -0.46
SRSF1-206ENST00000583741 FAM19A1Q7Z5A9 133 aa12.16□□□□□ -0.46
SRSF1-206ENST00000583741 TRBV20-1A0A075B6N2 111 aa12.15□□□□□ -0.46
SRSF1-206ENST00000583741 TCL1BO95988 128 aa12.15□□□□□ -0.46
SRSF1-206ENST00000583741 Q6ZRX8 168 aa12.15□□□□□ -0.46
SRSF1-206ENST00000583741 FAM218AQ96MZ4 157 aa12.15□□□□□ -0.46
SRSF1-206ENST00000583741 BCE1O60756 84 aa12.14□□□□□ -0.47
SRSF1-206ENST00000583741 LST1O00453 97 aa12.13□□□□□ -0.47
SRSF1-206ENST00000583741 ATXN8Q156A1 80 aa12.13□□□□□ -0.47
SRSF1-206ENST00000583741 LINC00575Q6W349 94 aa12.13□□□□□ -0.47
SRSF1-206ENST00000583741 PRLHP81277 87 aa12.12□□□□□ -0.47
SRSF1-206ENST00000583741 A0A0U1RQV1 116 aa12.11□□□□□ -0.47
SRSF1-206ENST00000583741 K7EP34 96 aa12.11□□□□□ -0.47
SRSF1-206ENST00000583741 SLC25A20O43772 301 aa12.11□□□□□ -0.47
SRSF1-206ENST00000583741 UBE2AP49459 152 aa12.11□□□□□ -0.47
SRSF1-206ENST00000583741 SNCGO76070 127 aa12.1□□□□□ -0.47
SRSF1-206ENST00000583741 GTF2H5Q6ZYL4 71 aa12.1□□□□□ -0.47
SRSF1-206ENST00000583741 A0A1B0GX51 115 aa12.09□□□□□ -0.47
SRSF1-206ENST00000583741 hADV29S1A0JD25 119 aa12.09□□□□□ -0.47
SRSF1-206ENST00000583741 TRACP01848 142 aa12.08□□□□□ -0.47
SRSF1-206ENST00000583741 Q9BRP9 147 aa12.08□□□□□ -0.47
SRSF1-206ENST00000583741 DHRS4-AS1Q9P1J3 65 aa12.08□□□□□ -0.47
SRSF1-206ENST00000583741 ZNF861PO60384 105 aa12.08□□□□□ -0.48
SRSF1-206ENST00000583741 H3BMG7 143 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms