RNA–Protein interactions for RNA: ENST00000580875.1

SNX11-207, Transcript of sorting nexin 11, humanhuman

TSL 2

Gene SNX11, Length 704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-207ENST00000580875 SOSTDC1Q6X4U4 206 aa12.49□□□□□ -0.41
SNX11-207ENST00000580875 A4D1N5 150 aa12.48□□□□□ -0.41
SNX11-207ENST00000580875 SND1-IT1Q9HBX3 110 aa12.48□□□□□ -0.41
SNX11-207ENST00000580875 NHP2Q9NX24 153 aaKnown RBP12.47□□□□□ -0.41
SNX11-207ENST00000580875 EIF4EBP3O60516 100 aaPredicted RBP12.46□□□□□ -0.41
SNX11-207ENST00000580875 LOC107984156A0A0G2JMH3 177 aa12.45□□□□□ -0.42
SNX11-207ENST00000580875 ARL17AQ8IVW1 177 aa12.45□□□□□ -0.42
SNX11-207ENST00000580875 ZNF861PO60384 105 aa12.43□□□□□ -0.42
SNX11-207ENST00000580875 PRR4Q16378 134 aa12.43□□□□□ -0.42
SNX11-207ENST00000580875 COL5A1-AS1Q5SY13 56 aa12.43□□□□□ -0.42
SNX11-207ENST00000580875 A0A0B4J2C4 111 aa12.42□□□□□ -0.42
SNX11-207ENST00000580875 A0A1B0GWB2 263 aa12.42□□□□□ -0.42
SNX11-207ENST00000580875 XAGE1AQ9HD64 81 aa12.42□□□□□ -0.42
SNX11-207ENST00000580875 RAB37Q96AX2 223 aa12.41□□□□□ -0.42
SNX11-207ENST00000580875 K7ERJ3 54 aa12.4□□□□□ -0.42
SNX11-207ENST00000580875 NDUFC2O95298 119 aa12.4□□□□□ -0.42
SNX11-207ENST00000580875 CFC1BP0CG36 223 aa12.4□□□□□ -0.42
SNX11-207ENST00000580875 CFC1P0CG37 223 aa12.4□□□□□ -0.42
SNX11-207ENST00000580875 LBHQ53QV2 105 aaPredicted RBP12.4□□□□□ -0.42
SNX11-207ENST00000580875 C22orf24Q9Y442 160 aa12.4□□□□□ -0.42
SNX11-207ENST00000580875 PRO1854Q9UHT4 67 aa12.36□□□□□ -0.43
SNX11-207ENST00000580875 MUC2Q02817 5179 aa12.35□□□□□ -0.43
SNX11-207ENST00000580875 TRAV13-2A0A0B4J235 113 aa12.34□□□□□ -0.43
SNX11-207ENST00000580875 IGKV2-28A0A075B6P5 120 aa12.33□□□□□ -0.44
SNX11-207ENST00000580875 NCR3O14931 201 aa12.33□□□□□ -0.44
SNX11-207ENST00000580875 IGKV2D-28P01615 120 aa12.33□□□□□ -0.44
SNX11-207ENST00000580875 MRPL55Q7Z7F7 128 aaKnown RBP12.33□□□□□ -0.44
SNX11-207ENST00000580875 TAX1BP3O14907 124 aa12.32□□□□□ -0.44
SNX11-207ENST00000580875 VPREB1P12018 145 aa12.32□□□□□ -0.44
SNX11-207ENST00000580875 RPL28P46779 137 aaKnown RBP12.32□□□□□ -0.44
SNX11-207ENST00000580875 Q8NDZ9 215 aa12.32□□□□□ -0.44
SNX11-207ENST00000580875 TRBV10-2A0A0K0K1G8 114 aa12.31□□□□□ -0.44
SNX11-207ENST00000580875 BCE1O60756 84 aa12.31□□□□□ -0.44
SNX11-207ENST00000580875 LINC00337Q8N6G1 96 aa12.31□□□□□ -0.44
SNX11-207ENST00000580875 TSPAN13O95857 204 aa12.3□□□□□ -0.44
SNX11-207ENST00000580875 Q1RN00 199 aa12.3□□□□□ -0.44
SNX11-207ENST00000580875 NKAPP1Q8N9T2 125 aa12.3□□□□□ -0.44
SNX11-207ENST00000580875 H7C2G1 150 aa12.29□□□□□ -0.44
SNX11-207ENST00000580875 OR13C6PQ8NH95 151 aa12.29□□□□□ -0.44
SNX11-207ENST00000580875 A0A087X002 238 aa12.28□□□□□ -0.44
SNX11-207ENST00000580875 IGLV5-37A0A075B6J1 123 aa12.27□□□□□ -0.45
SNX11-207ENST00000580875 C9orf118A6NHY6 69 aa12.27□□□□□ -0.45
SNX11-207ENST00000580875 M0R378 163 aa12.27□□□□□ -0.45
SNX11-207ENST00000580875 CRYGAP11844 174 aa12.27□□□□□ -0.45
SNX11-207ENST00000580875 S100A7L2Q5SY68 101 aa12.27□□□□□ -0.45
SNX11-207ENST00000580875 A0A0U1RQV1 116 aa12.26□□□□□ -0.45
SNX11-207ENST00000580875 TYMSOSQ8TAI1 123 aa12.26□□□□□ -0.45
SNX11-207ENST00000580875 RPL37AP8A6NKH3 93 aa12.25□□□□□ -0.45
SNX11-207ENST00000580875 LINC00167Q96N53 147 aa12.25□□□□□ -0.45
SNX11-207ENST00000580875 TMEM126AQ9H061 195 aa12.25□□□□□ -0.45
SNX11-207ENST00000580875 H3BUT2 72 aa12.24□□□□□ -0.45
SNX11-207ENST00000580875 NAA38Q9BRA0 125 aaKnown RBP12.24□□□□□ -0.45
SNX11-207ENST00000580875 PSMB2P49721 201 aa12.22□□□□□ -0.45
SNX11-207ENST00000580875 GAGE10A6NGK3 116 aa12.21□□□□□ -0.45
SNX11-207ENST00000580875 IGLV6-57P01721 117 aa12.21□□□□□ -0.45
SNX11-207ENST00000580875 CBY1Q9Y3M2 126 aa12.21□□□□□ -0.45
SNX11-207ENST00000580875 TRBV10-3A0A0K0K1G6 114 aa12.2□□□□□ -0.46
SNX11-207ENST00000580875 LYRM7Q5U5X0 104 aa12.2□□□□□ -0.46
SNX11-207ENST00000580875 SMIM11BQ8TCY0 68 aa12.19□□□□□ -0.46
SNX11-207ENST00000580875 ANAPC11Q9NYG5 84 aa12.19□□□□□ -0.46
SNX11-207ENST00000580875 A0A1W2PPM0 123 aa12.18□□□□□ -0.46
SNX11-207ENST00000580875 UBE2AP49459 152 aa12.18□□□□□ -0.46
SNX11-207ENST00000580875 KRTAP13-1Q8IUC0 172 aa12.18□□□□□ -0.46
SNX11-207ENST00000580875 TRIAP1O43715 76 aa12.17□□□□□ -0.46
SNX11-207ENST00000580875 COX6CP09669 75 aa12.17□□□□□ -0.46
SNX11-207ENST00000580875 FABP2P12104 132 aa12.17□□□□□ -0.46
SNX11-207ENST00000580875 TRAV23DV6A0A075B6W5 121 aa12.16□□□□□ -0.46
SNX11-207ENST00000580875 KRTAP13-2Q52LG2 175 aa12.16□□□□□ -0.46
SNX11-207ENST00000580875 SCGB1C2P0DMR2 95 aa12.15□□□□□ -0.46
SNX11-207ENST00000580875 FAM229BQ4G0N7 80 aa12.15□□□□□ -0.46
SNX11-207ENST00000580875 A0A1B0GV90 55 aa12.14□□□□□ -0.47
SNX11-207ENST00000580875 PRYO14603 147 aa12.12□□□□□ -0.47
SNX11-207ENST00000580875 VAMP3Q15836 100 aa12.12□□□□□ -0.47
SNX11-207ENST00000580875 LINC00304Q8N9R0 145 aa12.12□□□□□ -0.47
SNX11-207ENST00000580875 RETNLBQ9BQ08 111 aa12.11□□□□□ -0.47
SNX11-207ENST00000580875 ZNF73O43830 326 aaPredicted RBP12.1□□□□□ -0.47
SNX11-207ENST00000580875 C6orf99Q4VX62 202 aa12.1□□□□□ -0.47
SNX11-207ENST00000580875 KCNQ1DNQ9H478 68 aa12.1□□□□□ -0.47
SNX11-207ENST00000580875 SPCS1Q9Y6A9 102 aa12.1□□□□□ -0.47
SNX11-207ENST00000580875 TRBV20-1A0A075B6N2 111 aa12.07□□□□□ -0.48
SNX11-207ENST00000580875 H0YGX0 51 aa12.07□□□□□ -0.48
SNX11-207ENST00000580875 PRLHP81277 87 aa12.07□□□□□ -0.48
SNX11-207ENST00000580875 K7EP34 96 aa12.06□□□□□ -0.48
SNX11-207ENST00000580875 GTF2H5Q6ZYL4 71 aa12.06□□□□□ -0.48
SNX11-207ENST00000580875 KRTAP9-2Q9BYQ4 174 aa12.06□□□□□ -0.48
SNX11-207ENST00000580875 TRBV7-6A0A0J9YX20 115 aa12.05□□□□□ -0.48
SNX11-207ENST00000580875 FAM19A1Q7Z5A9 133 aa12.05□□□□□ -0.48
SNX11-207ENST00000580875 CLEC2BQ92478 149 aa12.05□□□□□ -0.48
SNX11-207ENST00000580875 TCL1BO95988 128 aa12.04□□□□□ -0.48
SNX11-207ENST00000580875 ATXN8Q156A1 80 aa12.04□□□□□ -0.48
SNX11-207ENST00000580875 TPRXLQ17RH7 258 aa12.04□□□□□ -0.48
SNX11-207ENST00000580875 LCE2AQ5TA79 106 aaPredicted RBP12.04□□□□□ -0.48
SNX11-207ENST00000580875 CDIP1Q9H305 208 aa12.04□□□□□ -0.48
SNX11-207ENST00000580875 COX7BP24311 80 aa12.03□□□□□ -0.48
SNX11-207ENST00000580875 ETDCA0A1B0GVM5 59 aa12.02□□□□□ -0.49
SNX11-207ENST00000580875 SPRR1AP35321 89 aa12.02□□□□□ -0.49
SNX11-207ENST00000580875 IGLV7-46A0A075B6I9 117 aa12.01□□□□□ -0.49
SNX11-207ENST00000580875 LST1O00453 97 aa12.01□□□□□ -0.49
SNX11-207ENST00000580875 ELOF1P60002 83 aaKnown RBP12.01□□□□□ -0.49
SNX11-207ENST00000580875 FAM218AQ96MZ4 157 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms