RNA–Protein interactions for RNA: ENST00000564628.1

NME3-207, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-207ENST00000564628 FXYD2P54710 66 aa11.5□□□□□ -0.57
NME3-207ENST00000564628 SNHG12Q9BXW3 62 aa11.5□□□□□ -0.57
NME3-207ENST00000564628 VPREB1P12018 145 aa11.47□□□□□ -0.57
NME3-207ENST00000564628 SOSTDC1Q6X4U4 206 aa11.47□□□□□ -0.57
NME3-207ENST00000564628 NDUFC2O95298 119 aa11.46□□□□□ -0.57
NME3-207ENST00000564628 LINC00167Q96N53 147 aa11.46□□□□□ -0.57
NME3-207ENST00000564628 NHP2Q9NX24 153 aaKnown RBP11.46□□□□□ -0.57
NME3-207ENST00000564628 COL5A1-AS1Q5SY13 56 aa11.45□□□□□ -0.58
NME3-207ENST00000564628 NKAPP1Q8N9T2 125 aa11.45□□□□□ -0.58
NME3-207ENST00000564628 Q8NDZ9 215 aa11.45□□□□□ -0.58
NME3-207ENST00000564628 RAB37Q96AX2 223 aa11.45□□□□□ -0.58
NME3-207ENST00000564628 A0A0B4J2C4 111 aa11.44□□□□□ -0.58
NME3-207ENST00000564628 A0A1B0GWB2 263 aa11.44□□□□□ -0.58
NME3-207ENST00000564628 EIF4EBP3O60516 100 aaPredicted RBP11.44□□□□□ -0.58
NME3-207ENST00000564628 CFC1BP0CG36 223 aa11.43□□□□□ -0.58
NME3-207ENST00000564628 CFC1P0CG37 223 aa11.43□□□□□ -0.58
NME3-207ENST00000564628 LPAP08519 4548 aa11.41□□□□□ -0.58
NME3-207ENST00000564628 TRAV13-2A0A0B4J235 113 aa11.41□□□□□ -0.58
NME3-207ENST00000564628 GAGE10A6NGK3 116 aa11.41□□□□□ -0.58
NME3-207ENST00000564628 RPL37AP8A6NKH3 93 aa11.41□□□□□ -0.58
NME3-207ENST00000564628 DIRC1Q969H9 104 aa11.41□□□□□ -0.58
NME3-207ENST00000564628 PRO1854Q9UHT4 67 aa11.41□□□□□ -0.58
NME3-207ENST00000564628 H0Y9J4 135 aa11.4□□□□□ -0.58
NME3-207ENST00000564628 BCE1O60756 84 aa11.39□□□□□ -0.59
NME3-207ENST00000564628 TRBV10-2A0A0K0K1G8 114 aa11.38□□□□□ -0.59
NME3-207ENST00000564628 ZNF861PO60384 105 aa11.38□□□□□ -0.59
NME3-207ENST00000564628 IGLV1-50A0A075B6I6 118 aa11.37□□□□□ -0.59
NME3-207ENST00000564628 K7ERJ3 54 aa11.36□□□□□ -0.59
NME3-207ENST00000564628 IGKV2-28A0A075B6P5 120 aa11.35□□□□□ -0.59
NME3-207ENST00000564628 IGKV2D-28P01615 120 aa11.35□□□□□ -0.59
NME3-207ENST00000564628 OR13C6PQ8NH95 151 aa11.35□□□□□ -0.59
NME3-207ENST00000564628 M0R378 163 aa11.34□□□□□ -0.59
NME3-207ENST00000564628 S100A7L2Q5SY68 101 aa11.34□□□□□ -0.59
NME3-207ENST00000564628 KRTAP13-1Q8IUC0 172 aa11.34□□□□□ -0.59
NME3-207ENST00000564628 PRR26Q8N8Z3 221 aa11.34□□□□□ -0.59
NME3-207ENST00000564628 TMEM126AQ9H061 195 aa11.34□□□□□ -0.59
NME3-207ENST00000564628 KRTAP1-4P0C5Y4 121 aa11.33□□□□□ -0.6
NME3-207ENST00000564628 LINC00337Q8N6G1 96 aa11.33□□□□□ -0.6
NME3-207ENST00000564628 CBY1Q9Y3M2 126 aa11.33□□□□□ -0.6
NME3-207ENST00000564628 TAX1BP3O14907 124 aa11.32□□□□□ -0.6
NME3-207ENST00000564628 NCR3O14931 201 aa11.32□□□□□ -0.6
NME3-207ENST00000564628 RPL13AP40429 203 aaKnown RBP11.32□□□□□ -0.6
NME3-207ENST00000564628 RPL28P46779 137 aaKnown RBP11.32□□□□□ -0.6
NME3-207ENST00000564628 Q1RN00 199 aa11.32□□□□□ -0.6
NME3-207ENST00000564628 C9orf118A6NHY6 69 aa11.31□□□□□ -0.6
NME3-207ENST00000564628 H7C2G1 150 aa11.29□□□□□ -0.6
NME3-207ENST00000564628 TSPAN13O95857 204 aa11.27□□□□□ -0.61
NME3-207ENST00000564628 IGLV6-57P01721 117 aa11.27□□□□□ -0.61
NME3-207ENST00000564628 COX6CP09669 75 aa11.27□□□□□ -0.61
NME3-207ENST00000564628 PSMB2P49721 201 aa11.27□□□□□ -0.61
NME3-207ENST00000564628 MUC2Q02817 5179 aa11.27□□□□□ -0.61
NME3-207ENST00000564628 H3BUT2 72 aa11.26□□□□□ -0.61
NME3-207ENST00000564628 UBE2AP49459 152 aa11.26□□□□□ -0.61
NME3-207ENST00000564628 LYRM7Q5U5X0 104 aa11.26□□□□□ -0.61
NME3-207ENST00000564628 PRYO14603 147 aa11.25□□□□□ -0.61
NME3-207ENST00000564628 TRBV10-3A0A0K0K1G6 114 aa11.24□□□□□ -0.61
NME3-207ENST00000564628 SCGB1C2P0DMR2 95 aa11.24□□□□□ -0.61
NME3-207ENST00000564628 PRLHP81277 87 aa11.24□□□□□ -0.61
NME3-207ENST00000564628 KCNQ1DNQ9H478 68 aa11.24□□□□□ -0.61
NME3-207ENST00000564628 SPRR1AP35321 89 aa11.23□□□□□ -0.61
NME3-207ENST00000564628 FAM19A1Q7Z5A9 133 aa11.23□□□□□ -0.61
NME3-207ENST00000564628 SMIM11BQ8TCY0 68 aa11.23□□□□□ -0.61
NME3-207ENST00000564628 FABP2P12104 132 aa11.22□□□□□ -0.61
NME3-207ENST00000564628 VAMP3Q15836 100 aa11.22□□□□□ -0.61
NME3-207ENST00000564628 TRAV23DV6A0A075B6W5 121 aa11.2□□□□□ -0.62
NME3-207ENST00000564628 A0A1W2PPM0 123 aa11.2□□□□□ -0.62
NME3-207ENST00000564628 KRTAP4-16G5E9R7 235 aaPredicted RBP11.2□□□□□ -0.62
NME3-207ENST00000564628 H0YGX0 51 aa11.19□□□□□ -0.62
NME3-207ENST00000564628 PRR4Q16378 134 aa11.19□□□□□ -0.62
NME3-207ENST00000564628 NAA38Q9BRA0 125 aaKnown RBP11.19□□□□□ -0.62
NME3-207ENST00000564628 TRIAP1O43715 76 aa11.18□□□□□ -0.62
NME3-207ENST00000564628 A0A0U1RQV1 116 aa11.17□□□□□ -0.62
NME3-207ENST00000564628 ZNF73O43830 326 aaPredicted RBP11.17□□□□□ -0.62
NME3-207ENST00000564628 TRBV20-1A0A075B6N2 111 aa11.16□□□□□ -0.62
NME3-207ENST00000564628 TRBV7-6A0A0J9YX20 115 aa11.16□□□□□ -0.62
NME3-207ENST00000564628 A0A087X002 238 aa11.15□□□□□ -0.62
NME3-207ENST00000564628 SNCGO76070 127 aa11.15□□□□□ -0.62
NME3-207ENST00000564628 C6orf99Q4VX62 202 aa11.15□□□□□ -0.62
NME3-207ENST00000564628 FAM229BQ4G0N7 80 aa11.13□□□□□ -0.63
NME3-207ENST00000564628 GTF2H5Q6ZYL4 71 aa11.13□□□□□ -0.63
NME3-207ENST00000564628 HIGD2AQ9BW72 106 aa11.13□□□□□ -0.63
NME3-207ENST00000564628 SPCS1Q9Y6A9 102 aa11.13□□□□□ -0.63
NME3-207ENST00000564628 A0A1B0GV90 55 aa11.12□□□□□ -0.63
NME3-207ENST00000564628 ETDCA0A1B0GVM5 59 aa11.12□□□□□ -0.63
NME3-207ENST00000564628 B5MCH6 92 aa11.11□□□□□ -0.63
NME3-207ENST00000564628 CRYGAP11844 174 aa11.11□□□□□ -0.63
NME3-207ENST00000564628 ATXN8Q156A1 80 aa11.11□□□□□ -0.63
NME3-207ENST00000564628 ANAPC11Q9NYG5 84 aa11.11□□□□□ -0.63
NME3-207ENST00000564628 COX7BP24311 80 aa11.1□□□□□ -0.63
NME3-207ENST00000564628 KRTAP9-2Q9BYQ4 174 aa11.1□□□□□ -0.63
NME3-207ENST00000564628 SMCR5Q8TEV8 140 aa11.09□□□□□ -0.63
NME3-207ENST00000564628 A0A1B0GX51 115 aa11.08□□□□□ -0.64
NME3-207ENST00000564628 K7EP34 96 aa11.08□□□□□ -0.64
NME3-207ENST00000564628 SLC25A20O43772 301 aa11.08□□□□□ -0.64
NME3-207ENST00000564628 TCL1BO95988 128 aa11.08□□□□□ -0.64
NME3-207ENST00000564628 KRTAP13-2Q52LG2 175 aa11.08□□□□□ -0.64
NME3-207ENST00000564628 SPRR4Q96PI1 79 aa11.08□□□□□ -0.64
NME3-207ENST00000564628 ELOF1P60002 83 aaKnown RBP11.07□□□□□ -0.64
NME3-207ENST00000564628 Q6ZRX8 168 aa11.07□□□□□ -0.64
NME3-207ENST00000564628 LST1O00453 97 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms