RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 K7ERJ3 54 aa7.05□□□□□ -1.28
CARMIL3-204ENST00000561354 C9orf129Q5T035 196 aaKnown RBP7.05□□□□□ -1.28
CARMIL3-204ENST00000561354 RAB37Q96AX2 223 aa7.05□□□□□ -1.28
CARMIL3-204ENST00000561354 LITAFQ99732 161 aa7.05□□□□□ -1.28
CARMIL3-204ENST00000561354 ZNF861PO60384 105 aa7.04□□□□□ -1.28
CARMIL3-204ENST00000561354 ZNF625Q96I27 306 aaPredicted RBP7.04□□□□□ -1.28
CARMIL3-204ENST00000561354 C2orf82Q6UX34 121 aa7.03□□□□□ -1.28
CARMIL3-204ENST00000561354 COX7B2Q8TF08 81 aa7.03□□□□□ -1.28
CARMIL3-204ENST00000561354 SPCS1Q9Y6A9 102 aa7.03□□□□□ -1.28
CARMIL3-204ENST00000561354 PRO1854Q9UHT4 67 aa7.02□□□□□ -1.29
CARMIL3-204ENST00000561354 MUC2Q02817 5179 aa7.01□□□□□ -1.29
CARMIL3-204ENST00000561354 A4D1N5 150 aa7.01□□□□□ -1.29
CARMIL3-204ENST00000561354 CFC1BP0CG36 223 aa7.01□□□□□ -1.29
CARMIL3-204ENST00000561354 CFC1P0CG37 223 aa7.01□□□□□ -1.29
CARMIL3-204ENST00000561354 MUSTN1Q8IVN3 82 aa7.01□□□□□ -1.29
CARMIL3-204ENST00000561354 KRTAP9-2Q9BYQ4 174 aa7.01□□□□□ -1.29
CARMIL3-204ENST00000561354 CXCL5P42830 114 aa7□□□□□ -1.29
CARMIL3-204ENST00000561354 MEIG1Q5JSS6 88 aa7□□□□□ -1.29
CARMIL3-204ENST00000561354 C22orf24Q9Y442 160 aa7□□□□□ -1.29
CARMIL3-204ENST00000561354 TSPAN13O95857 204 aa6.99□□□□□ -1.29
CARMIL3-204ENST00000561354 PRSS2P07478 247 aa6.99□□□□□ -1.29
CARMIL3-204ENST00000561354 Q8IZM0 81 aa6.99□□□□□ -1.29
CARMIL3-204ENST00000561354 TRBV20-1A0A075B6N2 111 aa6.98□□□□□ -1.29
CARMIL3-204ENST00000561354 CKS1BP61024 79 aa6.98□□□□□ -1.29
CARMIL3-204ENST00000561354 ADAMTSL4-AS1Q5T5F5 129 aa6.98□□□□□ -1.29
CARMIL3-204ENST00000561354 RPL28P46779 137 aaKnown RBP6.97□□□□□ -1.29
CARMIL3-204ENST00000561354 C6orf226Q5I0X4 101 aa6.97□□□□□ -1.29
CARMIL3-204ENST00000561354 LCE2AQ5TA79 106 aaPredicted RBP6.97□□□□□ -1.29
CARMIL3-204ENST00000561354 LINC00308Q8TCZ7 52 aa6.97□□□□□ -1.29
CARMIL3-204ENST00000561354 NAA38Q9BRA0 125 aaKnown RBP6.97□□□□□ -1.29
CARMIL3-204ENST00000561354 TOMM7Q9P0U1 55 aa6.97□□□□□ -1.29
CARMIL3-204ENST00000561354 ERG28Q9UKR5 140 aa6.97□□□□□ -1.29
CARMIL3-204ENST00000561354 A0A087X002 238 aa6.96□□□□□ -1.3
CARMIL3-204ENST00000561354 CRYGAP11844 174 aa6.96□□□□□ -1.3
CARMIL3-204ENST00000561354 XAGE1AQ9HD64 81 aa6.96□□□□□ -1.3
CARMIL3-204ENST00000561354 F8W1H4 67 aa6.95□□□□□ -1.3
CARMIL3-204ENST00000561354 BCE1O60756 84 aa6.95□□□□□ -1.3
CARMIL3-204ENST00000561354 MRPL55Q7Z7F7 128 aaKnown RBP6.95□□□□□ -1.3
CARMIL3-204ENST00000561354 TYMSOSQ8TAI1 123 aa6.95□□□□□ -1.3
CARMIL3-204ENST00000561354 COX17Q14061 63 aa6.94□□□□□ -1.3
CARMIL3-204ENST00000561354 LOC107984156A0A0G2JMH3 177 aa6.93□□□□□ -1.3
CARMIL3-204ENST00000561354 COX6CP09669 75 aa6.93□□□□□ -1.3
CARMIL3-204ENST00000561354 PSMB2P49721 201 aa6.93□□□□□ -1.3
CARMIL3-204ENST00000561354 Q1RN00 199 aa6.93□□□□□ -1.3
CARMIL3-204ENST00000561354 ARL17AQ8IVW1 177 aa6.93□□□□□ -1.3
CARMIL3-204ENST00000561354 LINC00158P58513 81 aa6.92□□□□□ -1.3
CARMIL3-204ENST00000561354 TRAV13-2A0A0B4J235 113 aa6.91□□□□□ -1.3
CARMIL3-204ENST00000561354 EIF4EBP3O60516 100 aaPredicted RBP6.91□□□□□ -1.3
CARMIL3-204ENST00000561354 SCGB1C2P0DMR2 95 aa6.91□□□□□ -1.3
CARMIL3-204ENST00000561354 MIR7-3HGQ8N6C7 128 aa6.91□□□□□ -1.3
CARMIL3-204ENST00000561354 DAND5Q8N907 189 aa6.91□□□□□ -1.3
CARMIL3-204ENST00000561354 LINC00167Q96N53 147 aa6.91□□□□□ -1.3
CARMIL3-204ENST00000561354 FAT4Q6V0I7 4981 aa6.9□□□□□ -1.3
CARMIL3-204ENST00000561354 NPC2P61916 151 aa6.9□□□□□ -1.3
CARMIL3-204ENST00000561354 ATXN8Q156A1 80 aa6.9□□□□□ -1.3
CARMIL3-204ENST00000561354 RPL37AP8A6NKH3 93 aa6.89□□□□□ -1.31
CARMIL3-204ENST00000561354 H3BMG7 143 aa6.89□□□□□ -1.31
CARMIL3-204ENST00000561354 K7ERU9 68 aa6.89□□□□□ -1.31
CARMIL3-204ENST00000561354 SMCPP49901 116 aaPredicted RBP6.89□□□□□ -1.31
CARMIL3-204ENST00000561354 FAM229BQ4G0N7 80 aa6.89□□□□□ -1.31
CARMIL3-204ENST00000561354 KRTAP13-2Q52LG2 175 aa6.89□□□□□ -1.31
CARMIL3-204ENST00000561354 SOSTDC1Q6X4U4 206 aa6.89□□□□□ -1.31
CARMIL3-204ENST00000561354 KRTAP13-1Q8IUC0 172 aa6.89□□□□□ -1.31
CARMIL3-204ENST00000561354 SND1-IT1Q9HBX3 110 aa6.89□□□□□ -1.31
CARMIL3-204ENST00000561354 IGLV5-37A0A075B6J1 123 aa6.88□□□□□ -1.31
CARMIL3-204ENST00000561354 A0A0U1RRA0 63 aa6.88□□□□□ -1.31
CARMIL3-204ENST00000561354 H7C2G1 150 aa6.88□□□□□ -1.31
CARMIL3-204ENST00000561354 TRIAP1O43715 76 aa6.88□□□□□ -1.31
CARMIL3-204ENST00000561354 TCL1BO95988 128 aa6.88□□□□□ -1.31
CARMIL3-204ENST00000561354 TPRXLQ17RH7 258 aa6.88□□□□□ -1.31
CARMIL3-204ENST00000561354 ANAPC11Q9NYG5 84 aa6.88□□□□□ -1.31
CARMIL3-204ENST00000561354 NDUFC2O95298 119 aa6.87□□□□□ -1.31
CARMIL3-204ENST00000561354 PFN2P35080 140 aa6.87□□□□□ -1.31
CARMIL3-204ENST00000561354 OCIAD2Q56VL3 154 aa6.87□□□□□ -1.31
CARMIL3-204ENST00000561354 LINC00304Q8N9R0 145 aa6.87□□□□□ -1.31
CARMIL3-204ENST00000561354 RETNLBQ9BQ08 111 aa6.87□□□□□ -1.31
CARMIL3-204ENST00000561354 PRO0461Q9UI25 63 aa6.87□□□□□ -1.31
CARMIL3-204ENST00000561354 UBE2AP49459 152 aa6.86□□□□□ -1.31
CARMIL3-204ENST00000561354 CDIP1Q9H305 208 aa6.86□□□□□ -1.31
CARMIL3-204ENST00000561354 KRTAP9-6A0A140TA67 174 aa6.85□□□□□ -1.31
CARMIL3-204ENST00000561354 J3QR89 54 aa6.85□□□□□ -1.31
CARMIL3-204ENST00000561354 IGLV7-46A0A075B6I9 117 aa6.84□□□□□ -1.31
CARMIL3-204ENST00000561354 LST1O00453 97 aa6.84□□□□□ -1.31
CARMIL3-204ENST00000561354 NKAPP1Q8N9T2 125 aa6.84□□□□□ -1.31
CARMIL3-204ENST00000561354 IGKV2-28A0A075B6P5 120 aa6.82□□□□□ -1.32
CARMIL3-204ENST00000561354 H3BT86 120 aa6.82□□□□□ -1.32
CARMIL3-204ENST00000561354 IGKV2D-28P01615 120 aa6.82□□□□□ -1.32
CARMIL3-204ENST00000561354 TRBV10-2A0A0K0K1G8 114 aa6.81□□□□□ -1.32
CARMIL3-204ENST00000561354 C9JAW5 83 aa6.81□□□□□ -1.32
CARMIL3-204ENST00000561354 H0YGX0 51 aa6.81□□□□□ -1.32
CARMIL3-204ENST00000561354 SLC25A20O43772 301 aa6.81□□□□□ -1.32
CARMIL3-204ENST00000561354 TRACP01848 142 aa6.81□□□□□ -1.32
CARMIL3-204ENST00000561354 TEN1Q86WV5 123 aa6.81□□□□□ -1.32
CARMIL3-204ENST00000561354 LINC00337Q8N6G1 96 aa6.81□□□□□ -1.32
CARMIL3-204ENST00000561354 MUC17Q685J3 4493 aa6.8□□□□□ -1.32
CARMIL3-204ENST00000561354 PRLHP81277 87 aa6.8□□□□□ -1.32
CARMIL3-204ENST00000561354 ETDBQ3ZM63 59 aa6.79□□□□□ -1.32
CARMIL3-204ENST00000561354 FAM19A1Q7Z5A9 133 aa6.79□□□□□ -1.32
CARMIL3-204ENST00000561354 ANKRD29Q8N6D5 301 aa6.79□□□□□ -1.32
CARMIL3-204ENST00000561354 TMEM126AQ9H061 195 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms