RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.58□□□□□ -1.84
USP3-215ENST00000559771 IGKV3OR2-268A0A0C4DH90 116 aa3.58□□□□□ -1.84
USP3-215ENST00000559771 IGLV5-39A0A0G2JS06 123 aa3.58□□□□□ -1.84
USP3-215ENST00000559771 IGKV2-29A2NJV5 120 aaPredicted RBP3.58□□□□□ -1.84
USP3-215ENST00000559771 H3BMG7 143 aa3.58□□□□□ -1.84
USP3-215ENST00000559771 UBE2L6O14933 153 aa3.58□□□□□ -1.84
USP3-215ENST00000559771 NDUFA1O15239 70 aa3.58□□□□□ -1.84
USP3-215ENST00000559771 C7orf33Q8WU49 177 aa3.58□□□□□ -1.84
USP3-215ENST00000559771 CDC42SE2Q9NRR3 84 aa3.58□□□□□ -1.84
USP3-215ENST00000559771 ERG28Q9UKR5 140 aa3.58□□□□□ -1.84
USP3-215ENST00000559771 TRBV30A0A0K0K1B3 111 aa3.57□□□□□ -1.84
USP3-215ENST00000559771 A4D1N5 150 aa3.57□□□□□ -1.84
USP3-215ENST00000559771 TSPAN13O95857 204 aa3.57□□□□□ -1.84
USP3-215ENST00000559771 COX6CP09669 75 aa3.57□□□□□ -1.84
USP3-215ENST00000559771 LINC00242Q5T6M2 205 aa3.57□□□□□ -1.84
USP3-215ENST00000559771 CFAP161Q6P656 301 aa3.57□□□□□ -1.84
USP3-215ENST00000559771 SPINK6Q6UWN8 80 aa3.57□□□□□ -1.84
USP3-215ENST00000559771 Q6ZUT4 128 aa3.57□□□□□ -1.84
USP3-215ENST00000559771 LINC01561Q8N1V8 128 aa3.57□□□□□ -1.84
USP3-215ENST00000559771 LITAFQ99732 161 aa3.57□□□□□ -1.84
USP3-215ENST00000559771 VPS25Q9BRG1 176 aa3.57□□□□□ -1.84
USP3-215ENST00000559771 LINC00959A0A1B0GUT2 108 aa3.56□□□□□ -1.84
USP3-215ENST00000559771 KRTAP9-6A8MVA2 160 aa3.56□□□□□ -1.84
USP3-215ENST00000559771 APOMO95445 188 aa3.56□□□□□ -1.84
USP3-215ENST00000559771 SCGB1C2P0DMR2 95 aa3.56□□□□□ -1.84
USP3-215ENST00000559771 MUSTN1Q8IVN3 82 aa3.56□□□□□ -1.84
USP3-215ENST00000559771 NAA38Q9BRA0 125 aaKnown RBP3.56□□□□□ -1.84
USP3-215ENST00000559771 CDKN2A-AS1Q9UH64 79 aa3.56□□□□□ -1.84
USP3-215ENST00000559771 PRO0461Q9UI25 63 aa3.56□□□□□ -1.84
USP3-215ENST00000559771 LOC107984156A0A0G2JMH3 177 aa3.55□□□□□ -1.84
USP3-215ENST00000559771 A0A1W2PNN7 141 aa3.55□□□□□ -1.84
USP3-215ENST00000559771 PRSS2P07478 247 aa3.55□□□□□ -1.84
USP3-215ENST00000559771 XCL1P47992 114 aa3.55□□□□□ -1.84
USP3-215ENST00000559771 ATXN8Q156A1 80 aa3.55□□□□□ -1.84
USP3-215ENST00000559771 ARL17AQ8IVW1 177 aa3.55□□□□□ -1.84
USP3-215ENST00000559771 MUC2Q02817 5179 aa3.54□□□□□ -1.84
USP3-215ENST00000559771 SMIM1B2RUZ4 78 aa3.54□□□□□ -1.84
USP3-215ENST00000559771 SPINK8P0C7L1 97 aa3.54□□□□□ -1.84
USP3-215ENST00000559771 SCGB1A1P11684 91 aa3.54□□□□□ -1.84
USP3-215ENST00000559771 PSMB2P49721 201 aa3.54□□□□□ -1.84
USP3-215ENST00000559771 CD164L2Q6UWJ8 174 aa3.54□□□□□ -1.84
USP3-215ENST00000559771 Q6ZRP5 223 aa3.54□□□□□ -1.84
USP3-215ENST00000559771 TEN1Q86WV5 123 aa3.54□□□□□ -1.84
USP3-215ENST00000559771 KRTAP11-1Q8IUC1 163 aa3.54□□□□□ -1.84
USP3-215ENST00000559771 PPDPFLQ8WWR9 84 aa3.54□□□□□ -1.84
USP3-215ENST00000559771 ZNF625Q96I27 306 aaPredicted RBP3.54□□□□□ -1.84
USP3-215ENST00000559771 CARD19Q96LW7 228 aa3.54□□□□□ -1.84
USP3-215ENST00000559771 A0A087WZ39 114 aa3.53□□□□□ -1.84
USP3-215ENST00000559771 TRAV13-1A0A0B4J241 112 aa3.53□□□□□ -1.84
USP3-215ENST00000559771 TCL1BO95988 128 aa3.53□□□□□ -1.84
USP3-215ENST00000559771 PCP4P48539 62 aa3.53□□□□□ -1.84
USP3-215ENST00000559771 SYCNQ0VAF6 134 aa3.53□□□□□ -1.84
USP3-215ENST00000559771 ETDBQ3ZM63 59 aa3.53□□□□□ -1.84
USP3-215ENST00000559771 ADAMTSL4-AS1Q5T5F5 129 aa3.53□□□□□ -1.84
USP3-215ENST00000559771 REG3GQ6UW15 175 aa3.53□□□□□ -1.84
USP3-215ENST00000559771 LINC00474Q9P2X8 69 aa3.53□□□□□ -1.84
USP3-215ENST00000559771 PSORS1C2Q9UIG4 136 aa3.53□□□□□ -1.84
USP3-215ENST00000559771 TRAV13-2A0A0B4J235 113 aa3.52□□□□□ -1.85
USP3-215ENST00000559771 IGHV3OR16-9A0A0B4J2B5 98 aa3.52□□□□□ -1.85
USP3-215ENST00000559771 TRBV10-2A0A0K0K1G8 114 aa3.52□□□□□ -1.85
USP3-215ENST00000559771 H3BT86 120 aa3.52□□□□□ -1.85
USP3-215ENST00000559771 GAGE2BQ13066 116 aa3.52□□□□□ -1.85
USP3-215ENST00000559771 SS18Q15532 418 aa3.52□□□□□ -1.85
USP3-215ENST00000559771 Q1RN00 199 aa3.52□□□□□ -1.85
USP3-215ENST00000559771 RNASE13Q5GAN3 156 aaKnown RBP3.52□□□□□ -1.85
USP3-215ENST00000559771 MEIG1Q5JSS6 88 aa3.52□□□□□ -1.85
USP3-215ENST00000559771 KRTAP7-1Q8IUC3 87 aa3.52□□□□□ -1.85
USP3-215ENST00000559771 LINC00308Q8TCZ7 52 aa3.52□□□□□ -1.85
USP3-215ENST00000559771 SIGMAR1Q99720 223 aa3.52□□□□□ -1.85
USP3-215ENST00000559771 LOC107984640A0A0U1RRK4 108 aa3.51□□□□□ -1.85
USP3-215ENST00000559771 SLC25A20O43772 301 aa3.51□□□□□ -1.85
USP3-215ENST00000559771 RPL13AP40429 203 aaKnown RBP3.51□□□□□ -1.85
USP3-215ENST00000559771 CXCL5P42830 114 aa3.51□□□□□ -1.85
USP3-215ENST00000559771 COX17Q14061 63 aa3.51□□□□□ -1.85
USP3-215ENST00000559771 C9orf116Q5BN46 136 aaPredicted RBP3.51□□□□□ -1.85
USP3-215ENST00000559771 PHF5AQ7RTV0 110 aaKnown RBP3.51□□□□□ -1.85
USP3-215ENST00000559771 ANKRD29Q8N6D5 301 aa3.51□□□□□ -1.85
USP3-215ENST00000559771 COX7B2Q8TF08 81 aa3.51□□□□□ -1.85
USP3-215ENST00000559771 FAM168BA1KXE4 195 aa3.5□□□□□ -1.85
USP3-215ENST00000559771 LST1O00453 97 aa3.5□□□□□ -1.85
USP3-215ENST00000559771 COX7A2LO14548 114 aa3.5□□□□□ -1.85
USP3-215ENST00000559771 TRACP01848 142 aa3.5□□□□□ -1.85
USP3-215ENST00000559771 C10orf25Q5T742 122 aa3.5□□□□□ -1.85
USP3-215ENST00000559771 C5orf38Q86SI9 138 aa3.5□□□□□ -1.85
USP3-215ENST00000559771 Q8IZM0 81 aa3.5□□□□□ -1.85
USP3-215ENST00000559771 PRR26Q8N8Z3 221 aa3.5□□□□□ -1.85
USP3-215ENST00000559771 FAM240AA0A1B0GVK7 77 aa3.49□□□□□ -1.85
USP3-215ENST00000559771 C9JAW5 83 aa3.49□□□□□ -1.85
USP3-215ENST00000559771 KRTAP1-4P0C5Y4 121 aa3.49□□□□□ -1.85
USP3-215ENST00000559771 C2orf48Q96LS8 159 aa3.49□□□□□ -1.85
USP3-215ENST00000559771 CAMK2N2Q96S95 79 aa3.49□□□□□ -1.85
USP3-215ENST00000559771 PKIGQ9Y2B9 76 aa3.49□□□□□ -1.85
USP3-215ENST00000559771 H0YGX0 51 aa3.48□□□□□ -1.85
USP3-215ENST00000559771 H7C2G1 150 aa3.48□□□□□ -1.85
USP3-215ENST00000559771 IGLV7-43P04211 117 aa3.48□□□□□ -1.85
USP3-215ENST00000559771 ACYP1P07311 99 aa3.48□□□□□ -1.85
USP3-215ENST00000559771 RPL28P46779 137 aaKnown RBP3.48□□□□□ -1.85
USP3-215ENST00000559771 RPL18AQ02543 176 aaKnown RBP3.48□□□□□ -1.85
USP3-215ENST00000559771 SPAG11BQ08648 103 aa3.48□□□□□ -1.85
USP3-215ENST00000559771 KIAA0087Q14695 138 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms